RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 VPS25Q9BRG1 176 aa9.3□□□□□ -0.92
ABCF3-214ENST00000480562 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
ABCF3-214ENST00000480562 UBE2V1Q13404 147 aa9.29□□□□□ -0.92
ABCF3-214ENST00000480562 PYY3Q5JQD4 70 aa9.29□□□□□ -0.92
ABCF3-214ENST00000480562 A0A1B0GVX0 72 aa9.27□□□□□ -0.93
ABCF3-214ENST00000480562 KRTAP19-1Q8IUB9 90 aa9.27□□□□□ -0.93
ABCF3-214ENST00000480562 C8orf87E5RJ46 101 aa9.26□□□□□ -0.93
ABCF3-214ENST00000480562 RBM3P98179 157 aaKnown RBP9.23□□□□□ -0.93
ABCF3-214ENST00000480562 ZCCHC13Q8WW36 166 aaKnown RBP9.23□□□□□ -0.93
ABCF3-214ENST00000480562 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
ABCF3-214ENST00000480562 UQCR10Q9UDW1 63 aa9.22□□□□□ -0.93
ABCF3-214ENST00000480562 MTURNQ8N3F0 131 aa9.21□□□□□ -0.94
ABCF3-214ENST00000480562 DSCR8Q96T75 97 aa9.21□□□□□ -0.94
ABCF3-214ENST00000480562 SPINK7P58062 85 aa9.2□□□□□ -0.94
ABCF3-214ENST00000480562 J3KT08 172 aa9.16□□□□□ -0.94
ABCF3-214ENST00000480562 BAALC-AS2P0C853 105 aa9.15□□□□□ -0.94
ABCF3-214ENST00000480562 C9JAW5 83 aa9.14□□□□□ -0.95
ABCF3-214ENST00000480562 Q6ZQT0 140 aa9.14□□□□□ -0.95
ABCF3-214ENST00000480562 C21orf62-AS1Q17RA5 79 aa9.12□□□□□ -0.95
ABCF3-214ENST00000480562 Q8N9P0 234 aaPredicted RBP9.12□□□□□ -0.95
ABCF3-214ENST00000480562 NDUFB1O75438 58 aa9.11□□□□□ -0.95
ABCF3-214ENST00000480562 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
ABCF3-214ENST00000480562 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
ABCF3-214ENST00000480562 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
ABCF3-214ENST00000480562 LYRM7Q5U5X0 104 aa9.08□□□□□ -0.96
ABCF3-214ENST00000480562 C8orf17Q9NRJ1 99 aa9.08□□□□□ -0.96
ABCF3-214ENST00000480562 A8MWP4 228 aa9.06□□□□□ -0.96
ABCF3-214ENST00000480562 IGKV3D-7A0A0C4DH55 119 aa9.04□□□□□ -0.96
ABCF3-214ENST00000480562 SYNE2Q8WXH0 6885 aaKnown RBP9.02□□□□□ -0.97
ABCF3-214ENST00000480562 JMJD7-PLA2G4BH0Y9G9 81 aa9.01□□□□□ -0.97
ABCF3-214ENST00000480562 ATXN8Q156A1 80 aa9.01□□□□□ -0.97
ABCF3-214ENST00000480562 KRTAP19-6Q3LI70 58 aa9.01□□□□□ -0.97
ABCF3-214ENST00000480562 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
ABCF3-214ENST00000480562 Q6ZVQ6 151 aa9□□□□□ -0.97
ABCF3-214ENST00000480562 NAA38Q9BRA0 125 aaKnown RBP9□□□□□ -0.97
ABCF3-214ENST00000480562 LINC00846Q9NV44 126 aa8.99□□□□□ -0.97
ABCF3-214ENST00000480562 A0A1B0GW54 56 aa8.98□□□□□ -0.97
ABCF3-214ENST00000480562 M0R143 59 aa8.98□□□□□ -0.97
ABCF3-214ENST00000480562 C14orf132Q9NPU4 83 aa8.96□□□□□ -0.98
ABCF3-214ENST00000480562 PDE6GP18545 87 aa8.95□□□□□ -0.98
ABCF3-214ENST00000480562 PRR15Q8IV56 129 aa8.95□□□□□ -0.98
ABCF3-214ENST00000480562 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
ABCF3-214ENST00000480562 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
ABCF3-214ENST00000480562 NREPQ16612 68 aa8.9□□□□□ -0.98
ABCF3-214ENST00000480562 TMEM254Q8TBM7 123 aa8.9□□□□□ -0.98
ABCF3-214ENST00000480562 H1FX-AS1Q4G0G2 97 aa8.89□□□□□ -0.99
ABCF3-214ENST00000480562 NDUFS5O43920 106 aa8.85□□□□□ -0.99
ABCF3-214ENST00000480562 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
ABCF3-214ENST00000480562 K7EQZ3 153 aa8.83□□□□□ -1
ABCF3-214ENST00000480562 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
ABCF3-214ENST00000480562 IGKV2-30P06310 120 aa8.8□□□□□ -1
ABCF3-214ENST00000480562 BATFQ16520 125 aa8.78□□□□□ -1
ABCF3-214ENST00000480562 Q5W150 140 aa8.78□□□□□ -1
ABCF3-214ENST00000480562 SMIM6P0DI80 62 aa8.77□□□□□ -1.01
ABCF3-214ENST00000480562 C7orf65Q6ZTY9 151 aa8.74□□□□□ -1.01
ABCF3-214ENST00000480562 TSTD3H0UI37 97 aa8.73□□□□□ -1.01
ABCF3-214ENST00000480562 H3BT86 120 aa8.72□□□□□ -1.01
ABCF3-214ENST00000480562 BPY2O14599 106 aa8.72□□□□□ -1.01
ABCF3-214ENST00000480562 KRTAP6-3Q3LI67 103 aa8.72□□□□□ -1.01
ABCF3-214ENST00000480562 C9orf118A6NHY6 69 aa8.69□□□□□ -1.02
ABCF3-214ENST00000480562 Q8N9L7 120 aa8.69□□□□□ -1.02
ABCF3-214ENST00000480562 C4orf26Q17RF5 130 aa8.68□□□□□ -1.02
ABCF3-214ENST00000480562 A0A1W2PPM0 123 aa8.66□□□□□ -1.02
ABCF3-214ENST00000480562 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
ABCF3-214ENST00000480562 CASC2Q6XLA1 102 aa8.66□□□□□ -1.02
ABCF3-214ENST00000480562 TAX1BP3O14907 124 aa8.64□□□□□ -1.03
ABCF3-214ENST00000480562 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
ABCF3-214ENST00000480562 CXCL6P80162 114 aa8.58□□□□□ -1.04
ABCF3-214ENST00000480562 FAM236AA0A1B0GUQ0 79 aa8.57□□□□□ -1.04
ABCF3-214ENST00000480562 FAM236BA0A1B0GV22 79 aa8.57□□□□□ -1.04
ABCF3-214ENST00000480562 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
ABCF3-214ENST00000480562 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
ABCF3-214ENST00000480562 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
ABCF3-214ENST00000480562 NEBP20929 6669 aa8.54□□□□□ -1.04
ABCF3-214ENST00000480562 SPCS1Q9Y6A9 102 aa8.53□□□□□ -1.04
ABCF3-214ENST00000480562 MT1BP07438 61 aa8.52□□□□□ -1.05
ABCF3-214ENST00000480562 A6NN06 94 aa8.51□□□□□ -1.05
ABCF3-214ENST00000480562 S4R3F8 94 aa8.51□□□□□ -1.05
ABCF3-214ENST00000480562 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
ABCF3-214ENST00000480562 Q5VV11 94 aa8.48□□□□□ -1.05
ABCF3-214ENST00000480562 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
ABCF3-214ENST00000480562 LOC105371267A0A1B0GV96 52 aa8.47□□□□□ -1.05
ABCF3-214ENST00000480562 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
ABCF3-214ENST00000480562 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
ABCF3-214ENST00000480562 LCA10Q71F78 164 aa8.46□□□□□ -1.06
ABCF3-214ENST00000480562 SPRR2GQ9BYE4 73 aa8.45□□□□□ -1.06
ABCF3-214ENST00000480562 KRTAP19-8Q3LI54 63 aa8.44□□□□□ -1.06
ABCF3-214ENST00000480562 MUC12Q9UKN1 5478 aa8.42□□□□□ -1.06
ABCF3-214ENST00000480562 PRO0461Q9UI25 63 aa8.38□□□□□ -1.07
ABCF3-214ENST00000480562 COL5A1-AS1Q5SY13 56 aa8.37□□□□□ -1.07
ABCF3-214ENST00000480562 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
ABCF3-214ENST00000480562 K7EP34 96 aa8.34□□□□□ -1.07
ABCF3-214ENST00000480562 KLKP1Q107X0 134 aa8.34□□□□□ -1.07
ABCF3-214ENST00000480562 TP53AIP1Q9HCN2 124 aa8.33□□□□□ -1.08
ABCF3-214ENST00000480562 A0A087WVE0 104 aa8.25□□□□□ -1.09
ABCF3-214ENST00000480562 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
ABCF3-214ENST00000480562 GTF2H5Q6ZYL4 71 aa8.23□□□□□ -1.09
ABCF3-214ENST00000480562 KRTAP5-9P26371 169 aa8.21□□□□□ -1.1
ABCF3-214ENST00000480562 KRTAP20-1Q3LI63 56 aa8.21□□□□□ -1.1
ABCF3-214ENST00000480562 F8W1H4 67 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms