RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 A0A1B0GVX0 72 aa7.66□□□□□ -1.18
PRKN-207ENST00000479615 ATXN8Q156A1 80 aa7.66□□□□□ -1.18
PRKN-207ENST00000479615 PDE6GP18545 87 aa7.65□□□□□ -1.18
PRKN-207ENST00000479615 NOTCH2NLQ7Z3S9 236 aa7.65□□□□□ -1.18
PRKN-207ENST00000479615 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
PRKN-207ENST00000479615 NDUFB1O75438 58 aa7.64□□□□□ -1.19
PRKN-207ENST00000479615 Q6ZQT0 140 aa7.64□□□□□ -1.19
PRKN-207ENST00000479615 FAM236DA0A1B0GTK5 79 aa7.62□□□□□ -1.19
PRKN-207ENST00000479615 FAM236CP0DP71 79 aa7.62□□□□□ -1.19
PRKN-207ENST00000479615 LYRM7Q5U5X0 104 aa7.62□□□□□ -1.19
PRKN-207ENST00000479615 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
PRKN-207ENST00000479615 MTURNQ8N3F0 131 aa7.59□□□□□ -1.19
PRKN-207ENST00000479615 SMIM6P0DI80 62 aa7.58□□□□□ -1.2
PRKN-207ENST00000479615 MPLKIPQ8TAP9 179 aa7.58□□□□□ -1.2
PRKN-207ENST00000479615 HRES1P13985 223 aa7.56□□□□□ -1.2
PRKN-207ENST00000479615 ZCCHC13Q8WW36 166 aaKnown RBP7.56□□□□□ -1.2
PRKN-207ENST00000479615 Q8N9P0 234 aaPredicted RBP7.55□□□□□ -1.2
PRKN-207ENST00000479615 A8MWP4 228 aa7.54□□□□□ -1.2
PRKN-207ENST00000479615 KRTAP9-8Q9BYQ0 159 aa7.54□□□□□ -1.2
PRKN-207ENST00000479615 TSTD3H0UI37 97 aa7.52□□□□□ -1.21
PRKN-207ENST00000479615 NAA38Q9BRA0 125 aaKnown RBP7.52□□□□□ -1.21
PRKN-207ENST00000479615 SPINK7P58062 85 aa7.5□□□□□ -1.21
PRKN-207ENST00000479615 NREPQ16612 68 aa7.5□□□□□ -1.21
PRKN-207ENST00000479615 C8orf17Q9NRJ1 99 aa7.5□□□□□ -1.21
PRKN-207ENST00000479615 C14orf132Q9NPU4 83 aa7.49□□□□□ -1.21
PRKN-207ENST00000479615 IGKV3D-7A0A0C4DH55 119 aa7.47□□□□□ -1.21
PRKN-207ENST00000479615 PRR15Q8IV56 129 aa7.47□□□□□ -1.21
PRKN-207ENST00000479615 Q6ZVQ6 151 aa7.46□□□□□ -1.22
PRKN-207ENST00000479615 H3BT86 120 aa7.45□□□□□ -1.22
PRKN-207ENST00000479615 BATFQ16520 125 aa7.43□□□□□ -1.22
PRKN-207ENST00000479615 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
PRKN-207ENST00000479615 MT2AP02795 61 aa7.41□□□□□ -1.22
PRKN-207ENST00000479615 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
PRKN-207ENST00000479615 MRPL34Q9BQ48 92 aaKnown RBP7.4□□□□□ -1.22
PRKN-207ENST00000479615 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
PRKN-207ENST00000479615 MMP24-AS1A0A0U1RRL7 71 aa7.37□□□□□ -1.23
PRKN-207ENST00000479615 hDV103S1A0JD37 113 aa7.37□□□□□ -1.23
PRKN-207ENST00000479615 KRTAP10-10P60014 251 aa7.37□□□□□ -1.23
PRKN-207ENST00000479615 WFDC13Q8IUB5 93 aa7.37□□□□□ -1.23
PRKN-207ENST00000479615 BPY2O14599 106 aa7.35□□□□□ -1.23
PRKN-207ENST00000479615 TAX1BP3O14907 124 aa7.35□□□□□ -1.23
PRKN-207ENST00000479615 MT1FP04733 61 aa7.34□□□□□ -1.23
PRKN-207ENST00000479615 K7EQZ3 153 aa7.33□□□□□ -1.24
PRKN-207ENST00000479615 NDUFS5O43920 106 aa7.32□□□□□ -1.24
PRKN-207ENST00000479615 USH2AO75445 5202 aa7.31□□□□□ -1.24
PRKN-207ENST00000479615 KRTAP9-3Q9BYQ3 159 aa7.31□□□□□ -1.24
PRKN-207ENST00000479615 LOC105371267A0A1B0GV96 52 aa7.28□□□□□ -1.24
PRKN-207ENST00000479615 SPCS1Q9Y6A9 102 aa7.28□□□□□ -1.24
PRKN-207ENST00000479615 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
PRKN-207ENST00000479615 SSPOA2VEC9 5147 aa7.25□□□□□ -1.25
PRKN-207ENST00000479615 LCE2BO14633 110 aa7.25□□□□□ -1.25
PRKN-207ENST00000479615 CASC2Q6XLA1 102 aa7.24□□□□□ -1.25
PRKN-207ENST00000479615 C7orf65Q6ZTY9 151 aa7.24□□□□□ -1.25
PRKN-207ENST00000479615 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
PRKN-207ENST00000479615 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
PRKN-207ENST00000479615 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
PRKN-207ENST00000479615 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
PRKN-207ENST00000479615 CXCL6P80162 114 aa7.21□□□□□ -1.26
PRKN-207ENST00000479615 COL5A1-AS1Q5SY13 56 aa7.21□□□□□ -1.26
PRKN-207ENST00000479615 UBL5Q9BZL1 73 aa7.21□□□□□ -1.26
PRKN-207ENST00000479615 HCG22E2RYF7 251 aa7.19□□□□□ -1.26
PRKN-207ENST00000479615 Q5W150 140 aa7.19□□□□□ -1.26
PRKN-207ENST00000479615 SMCPP49901 116 aaPredicted RBP7.17□□□□□ -1.26
PRKN-207ENST00000479615 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
PRKN-207ENST00000479615 Q8N9L7 120 aa7.17□□□□□ -1.26
PRKN-207ENST00000479615 KRTAP9-7A8MTY7 169 aa7.14□□□□□ -1.27
PRKN-207ENST00000479615 K7EP34 96 aa7.14□□□□□ -1.27
PRKN-207ENST00000479615 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
PRKN-207ENST00000479615 FCGBPQ9Y6R7 5405 aaPredicted RBP7.11□□□□□ -1.27
PRKN-207ENST00000479615 GTF2H5Q6ZYL4 71 aa7.1□□□□□ -1.27
PRKN-207ENST00000479615 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
PRKN-207ENST00000479615 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
PRKN-207ENST00000479615 F8W1H4 67 aa7.07□□□□□ -1.28
PRKN-207ENST00000479615 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
PRKN-207ENST00000479615 C1orf64Q8NEQ6 169 aa6.98□□□□□ -1.29
PRKN-207ENST00000479615 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
PRKN-207ENST00000479615 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
PRKN-207ENST00000479615 S4R3F8 94 aa6.97□□□□□ -1.29
PRKN-207ENST00000479615 C5orf47Q569G3 176 aa6.96□□□□□ -1.3
PRKN-207ENST00000479615 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
PRKN-207ENST00000479615 ACYP1P07311 99 aa6.94□□□□□ -1.3
PRKN-207ENST00000479615 FAM236AA0A1B0GUQ0 79 aa6.93□□□□□ -1.3
PRKN-207ENST00000479615 FAM236BA0A1B0GV22 79 aa6.93□□□□□ -1.3
PRKN-207ENST00000479615 MACF1Q9UPN3 7388 aaKnown RBP6.89□□□□□ -1.31
PRKN-207ENST00000479615 LCA10Q71F78 164 aa6.89□□□□□ -1.31
PRKN-207ENST00000479615 PCP4L1A6NKN8 68 aa6.88□□□□□ -1.31
PRKN-207ENST00000479615 ATP5EP2Q5VTU8 51 aa6.88□□□□□ -1.31
PRKN-207ENST00000479615 CYP4F30PQ9H0H9 118 aa6.88□□□□□ -1.31
PRKN-207ENST00000479615 TRAV22A0A0B4J277 110 aa6.87□□□□□ -1.31
PRKN-207ENST00000479615 LOC101927531A0A1B0GV80 90 aa6.87□□□□□ -1.31
PRKN-207ENST00000479615 FAM240AA0A1B0GVK7 77 aa6.86□□□□□ -1.31
PRKN-207ENST00000479615 SYNE2Q8WXH0 6885 aaKnown RBP6.83□□□□□ -1.32
PRKN-207ENST00000479615 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
PRKN-207ENST00000479615 ATOX1O00244 68 aa6.81□□□□□ -1.32
PRKN-207ENST00000479615 Q5VV11 94 aa6.81□□□□□ -1.32
PRKN-207ENST00000479615 UQCRQO14949 82 aa6.8□□□□□ -1.32
PRKN-207ENST00000479615 KLKP1Q107X0 134 aa6.8□□□□□ -1.32
PRKN-207ENST00000479615 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
PRKN-207ENST00000479615 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
PRKN-207ENST00000479615 KRTAP6-3Q3LI67 103 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms