RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 WFDC13Q8IUB5 93 aa3.24□□□□□ -1.89
SPTLC1-205ENST00000477888 PMCHL2Q9BQD1 86 aa3.24□□□□□ -1.89
SPTLC1-205ENST00000477888 IGKCP01834 107 aa3.23□□□□□ -1.89
SPTLC1-205ENST00000477888 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
SPTLC1-205ENST00000477888 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
SPTLC1-205ENST00000477888 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
SPTLC1-205ENST00000477888 hADV29S1A0JD25 119 aa3.22□□□□□ -1.89
SPTLC1-205ENST00000477888 ZCCHC13Q8WW36 166 aaKnown RBP3.22□□□□□ -1.89
SPTLC1-205ENST00000477888 SIGMAR1Q99720 223 aa3.22□□□□□ -1.89
SPTLC1-205ENST00000477888 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
SPTLC1-205ENST00000477888 SNHG12Q9BXW3 62 aa3.21□□□□□ -1.9
SPTLC1-205ENST00000477888 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
SPTLC1-205ENST00000477888 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
SPTLC1-205ENST00000477888 TMEM218A2RU14 115 aa3.2□□□□□ -1.9
SPTLC1-205ENST00000477888 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
SPTLC1-205ENST00000477888 C4orf26Q17RF5 130 aa3.2□□□□□ -1.9
SPTLC1-205ENST00000477888 PPDPFLQ8WWR9 84 aa3.2□□□□□ -1.9
SPTLC1-205ENST00000477888 IGKV4-1P06312 121 aa3.19□□□□□ -1.9
SPTLC1-205ENST00000477888 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
SPTLC1-205ENST00000477888 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.18□□□□□ -1.9
SPTLC1-205ENST00000477888 TTTY13Q9BZ97 58 aa3.18□□□□□ -1.9
SPTLC1-205ENST00000477888 HSPB8Q9UJY1 196 aa3.18□□□□□ -1.9
SPTLC1-205ENST00000477888 ANAPC13Q9BS18 74 aa3.17□□□□□ -1.9
SPTLC1-205ENST00000477888 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
SPTLC1-205ENST00000477888 IFITM1P13164 125 aa3.16□□□□□ -1.9
SPTLC1-205ENST00000477888 IMUPQ9GZP8 106 aa3.16□□□□□ -1.9
SPTLC1-205ENST00000477888 FAM236AA0A1B0GUQ0 79 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 FAM236BA0A1B0GV22 79 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 C3orf79P0CE67 100 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 SCGB1C2P0DMR2 95 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 FABP4P15090 132 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 MUSTN1Q8IVN3 82 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 COPS9Q8WXC6 57 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 YPEL4Q96NS1 127 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 LINC00472Q9H8W2 130 aa3.15□□□□□ -1.91
SPTLC1-205ENST00000477888 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
SPTLC1-205ENST00000477888 DEFB116Q30KQ4 102 aa3.14□□□□□ -1.91
SPTLC1-205ENST00000477888 C8orf87E5RJ46 101 aa3.13□□□□□ -1.91
SPTLC1-205ENST00000477888 SCGB1D4Q6XE38 83 aa3.12□□□□□ -1.91
SPTLC1-205ENST00000477888 BPY2O14599 106 aa3.11□□□□□ -1.91
SPTLC1-205ENST00000477888 RAB37Q96AX2 223 aa3.11□□□□□ -1.91
SPTLC1-205ENST00000477888 C8orf17Q9NRJ1 99 aa3.11□□□□□ -1.91
SPTLC1-205ENST00000477888 H3BMG7 143 aa3.1□□□□□ -1.91
SPTLC1-205ENST00000477888 MP68P56378 58 aa3.1□□□□□ -1.91
SPTLC1-205ENST00000477888 CLLU1Q5K131 121 aa3.1□□□□□ -1.91
SPTLC1-205ENST00000477888 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
SPTLC1-205ENST00000477888 MT3P25713 68 aa3.09□□□□□ -1.91
SPTLC1-205ENST00000477888 TRBV7-4A0A0J9YYF1 115 aa3.08□□□□□ -1.92
SPTLC1-205ENST00000477888 SYS1-DBNDD2H3BUS1 97 aa3.08□□□□□ -1.92
SPTLC1-205ENST00000477888 C12orf57Q99622 126 aa3.08□□□□□ -1.92
SPTLC1-205ENST00000477888 IGKV3D-7A0A0C4DH55 119 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 TRGC2P03986 189 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 MT1XP80297 61 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 KLKP1Q107X0 134 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 BVES-AS1Q5T3Y7 98 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 LINC01545Q5VT33 79 aa3.07□□□□□ -1.92
SPTLC1-205ENST00000477888 LOC105371267A0A1B0GV96 52 aa3.06□□□□□ -1.92
SPTLC1-205ENST00000477888 S100A2P29034 98 aa3.06□□□□□ -1.92
SPTLC1-205ENST00000477888 BATFQ16520 125 aa3.06□□□□□ -1.92
SPTLC1-205ENST00000477888 LUZP6Q538Z0 58 aa3.06□□□□□ -1.92
SPTLC1-205ENST00000477888 LYRM7Q5U5X0 104 aa3.05□□□□□ -1.92
SPTLC1-205ENST00000477888 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
SPTLC1-205ENST00000477888 DSCR8Q96T75 97 aa3.05□□□□□ -1.92
SPTLC1-205ENST00000477888 PRO2289Q9P1D8 64 aa3.05□□□□□ -1.92
SPTLC1-205ENST00000477888 ANKRD29Q8N6D5 301 aa3.03□□□□□ -1.92
SPTLC1-205ENST00000477888 CSAG1Q6PB30 78 aa3.02□□□□□ -1.93
SPTLC1-205ENST00000477888 FABP2P12104 132 aa3.01□□□□□ -1.93
SPTLC1-205ENST00000477888 CRIPTQ9P021 101 aa3.01□□□□□ -1.93
SPTLC1-205ENST00000477888 SNCGO76070 127 aa3□□□□□ -1.93
SPTLC1-205ENST00000477888 K7ERS5 55 aa2.99□□□□□ -1.93
SPTLC1-205ENST00000477888 TRACP01848 142 aa2.99□□□□□ -1.93
SPTLC1-205ENST00000477888 APOC3P02656 99 aa2.99□□□□□ -1.93
SPTLC1-205ENST00000477888 CCKP06307 115 aa2.99□□□□□ -1.93
SPTLC1-205ENST00000477888 S100A1P23297 94 aa2.99□□□□□ -1.93
SPTLC1-205ENST00000477888 PRR15Q8IV56 129 aa2.99□□□□□ -1.93
SPTLC1-205ENST00000477888 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
SPTLC1-205ENST00000477888 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
SPTLC1-205ENST00000477888 H0YGX0 51 aa2.98□□□□□ -1.93
SPTLC1-205ENST00000477888 J3KT08 172 aa2.98□□□□□ -1.93
SPTLC1-205ENST00000477888 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
SPTLC1-205ENST00000477888 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
SPTLC1-205ENST00000477888 C2orf91Q6ZV80 131 aa2.97□□□□□ -1.93
SPTLC1-205ENST00000477888 LCA10Q71F78 164 aa2.97□□□□□ -1.93
SPTLC1-205ENST00000477888 SVBPQ8N300 66 aa2.97□□□□□ -1.93
SPTLC1-205ENST00000477888 A0A1B0GV72 72 aa2.96□□□□□ -1.94
SPTLC1-205ENST00000477888 NDUFB1O75438 58 aa2.96□□□□□ -1.94
SPTLC1-205ENST00000477888 S4R3F8 94 aa2.96□□□□□ -1.94
SPTLC1-205ENST00000477888 A0A1B0GX51 115 aa2.95□□□□□ -1.94
SPTLC1-205ENST00000477888 NDUFA5Q16718 116 aa2.95□□□□□ -1.94
SPTLC1-205ENST00000477888 Q5W150 140 aa2.94□□□□□ -1.94
SPTLC1-205ENST00000477888 C7orf65Q6ZTY9 151 aa2.94□□□□□ -1.94
SPTLC1-205ENST00000477888 RBM3P98179 157 aaKnown RBP2.93□□□□□ -1.94
SPTLC1-205ENST00000477888 ATOH7Q8N100 152 aa2.93□□□□□ -1.94
SPTLC1-205ENST00000477888 MT4P47944 62 aa2.92□□□□□ -1.94
SPTLC1-205ENST00000477888 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
SPTLC1-205ENST00000477888 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
SPTLC1-205ENST00000477888 MRPL34Q9BQ48 92 aaKnown RBP2.91□□□□□ -1.94
SPTLC1-205ENST00000477888 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
SPTLC1-205ENST00000477888 KRTDAPP60985 99 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms