RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MT1BP07438 61 aa9.26□□□□□ -0.93
PDLIM1-202ENST00000477757 KRTAP2-3P0C7H8 128 aa9.23□□□□□ -0.93
PDLIM1-202ENST00000477757 KRTAP2-4Q9BYR9 128 aa9.23□□□□□ -0.93
PDLIM1-202ENST00000477757 KRTAP10-5P60370 271 aa9.2□□□□□ -0.94
PDLIM1-202ENST00000477757 LYRM7Q5U5X0 104 aa9.19□□□□□ -0.94
PDLIM1-202ENST00000477757 Q5VV11 94 aa9.19□□□□□ -0.94
PDLIM1-202ENST00000477757 ORMDL1Q9P0S3 153 aa9.19□□□□□ -0.94
PDLIM1-202ENST00000477757 J3KT08 172 aa9.18□□□□□ -0.94
PDLIM1-202ENST00000477757 H3BQ85 93 aa9.17□□□□□ -0.94
PDLIM1-202ENST00000477757 DSCR8Q96T75 97 aa9.17□□□□□ -0.94
PDLIM1-202ENST00000477757 DNAL4O96015 105 aa9.16□□□□□ -0.94
PDLIM1-202ENST00000477757 COX8AP10176 69 aa9.15□□□□□ -0.94
PDLIM1-202ENST00000477757 IGKV3D-7A0A0C4DH55 119 aa9.14□□□□□ -0.95
PDLIM1-202ENST00000477757 TRIAP1O43715 76 aa9.14□□□□□ -0.95
PDLIM1-202ENST00000477757 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
PDLIM1-202ENST00000477757 TMEM256-PLSCR3K7ERE1 68 aa9.13□□□□□ -0.95
PDLIM1-202ENST00000477757 VPS25Q9BRG1 176 aa9.13□□□□□ -0.95
PDLIM1-202ENST00000477757 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
PDLIM1-202ENST00000477757 TMEM238LA0A1B0GVL6 79 aa9.11□□□□□ -0.95
PDLIM1-202ENST00000477757 DLEU1O43261 78 aa9.11□□□□□ -0.95
PDLIM1-202ENST00000477757 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
PDLIM1-202ENST00000477757 PRO1854Q9UHT4 67 aa9.11□□□□□ -0.95
PDLIM1-202ENST00000477757 NDUFB1O75438 58 aa9.1□□□□□ -0.95
PDLIM1-202ENST00000477757 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
PDLIM1-202ENST00000477757 SPRR2GQ9BYE4 73 aa9.08□□□□□ -0.96
PDLIM1-202ENST00000477757 UBE2V1Q13404 147 aa9.06□□□□□ -0.96
PDLIM1-202ENST00000477757 HIGD1BQ9P298 99 aa9.06□□□□□ -0.96
PDLIM1-202ENST00000477757 FAM236AA0A1B0GUQ0 79 aa9.05□□□□□ -0.96
PDLIM1-202ENST00000477757 FAM236BA0A1B0GV22 79 aa9.05□□□□□ -0.96
PDLIM1-202ENST00000477757 S100A2P29034 98 aa9.04□□□□□ -0.96
PDLIM1-202ENST00000477757 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
PDLIM1-202ENST00000477757 Q6ZVQ6 151 aa9.04□□□□□ -0.96
PDLIM1-202ENST00000477757 Q6ZQT0 140 aa9.01□□□□□ -0.97
PDLIM1-202ENST00000477757 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
PDLIM1-202ENST00000477757 CEND1Q8N111 149 aa9□□□□□ -0.97
PDLIM1-202ENST00000477757 C2orf91Q6ZV80 131 aa8.99□□□□□ -0.97
PDLIM1-202ENST00000477757 C14orf144Q96I85 54 aa8.98□□□□□ -0.97
PDLIM1-202ENST00000477757 FXYD2P54710 66 aa8.95□□□□□ -0.98
PDLIM1-202ENST00000477757 SPRR2EP22531 72 aa8.94□□□□□ -0.98
PDLIM1-202ENST00000477757 SPRR2BP35325 72 aa8.94□□□□□ -0.98
PDLIM1-202ENST00000477757 SPRR2AP35326 72 aa8.94□□□□□ -0.98
PDLIM1-202ENST00000477757 C5orf47Q569G3 176 aa8.94□□□□□ -0.98
PDLIM1-202ENST00000477757 PSMB2P49721 201 aa8.93□□□□□ -0.98
PDLIM1-202ENST00000477757 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
PDLIM1-202ENST00000477757 IGKV2-30P06310 120 aa8.92□□□□□ -0.98
PDLIM1-202ENST00000477757 C9JAW5 83 aa8.91□□□□□ -0.98
PDLIM1-202ENST00000477757 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
PDLIM1-202ENST00000477757 TMEM254Q8TBM7 123 aa8.91□□□□□ -0.98
PDLIM1-202ENST00000477757 SPRR2FQ96RM1 72 aa8.91□□□□□ -0.98
PDLIM1-202ENST00000477757 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
PDLIM1-202ENST00000477757 COX6CP09669 75 aa8.9□□□□□ -0.98
PDLIM1-202ENST00000477757 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
PDLIM1-202ENST00000477757 KRTAP2-1Q9BYU5 128 aa8.9□□□□□ -0.98
PDLIM1-202ENST00000477757 PRR15Q8IV56 129 aa8.89□□□□□ -0.99
PDLIM1-202ENST00000477757 MMP24-AS1A0A0U1RRL7 71 aa8.88□□□□□ -0.99
PDLIM1-202ENST00000477757 PAM16Q9Y3D7 125 aa8.86□□□□□ -0.99
PDLIM1-202ENST00000477757 SPATA45Q537H7 98 aa8.85□□□□□ -0.99
PDLIM1-202ENST00000477757 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
PDLIM1-202ENST00000477757 K7ERJ3 54 aa8.84□□□□□ -0.99
PDLIM1-202ENST00000477757 C4orf26Q17RF5 130 aa8.84□□□□□ -0.99
PDLIM1-202ENST00000477757 NDUFS5O43920 106 aa8.83□□□□□ -1
PDLIM1-202ENST00000477757 A0A1B0GW54 56 aa8.81□□□□□ -1
PDLIM1-202ENST00000477757 KLKP1Q107X0 134 aa8.81□□□□□ -1
PDLIM1-202ENST00000477757 hDV103S1A0JD37 113 aa8.79□□□□□ -1
PDLIM1-202ENST00000477757 Q5W150 140 aa8.79□□□□□ -1
PDLIM1-202ENST00000477757 CSAG1Q6PB30 78 aa8.79□□□□□ -1
PDLIM1-202ENST00000477757 S100A6P06703 90 aa8.78□□□□□ -1
PDLIM1-202ENST00000477757 S4R3F8 94 aa8.77□□□□□ -1.01
PDLIM1-202ENST00000477757 LCE1AQ5T7P2 110 aa8.75□□□□□ -1.01
PDLIM1-202ENST00000477757 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
PDLIM1-202ENST00000477757 BAALC-AS2P0C853 105 aa8.74□□□□□ -1.01
PDLIM1-202ENST00000477757 LOC110117498A0A087WWA1 95 aa8.73□□□□□ -1.01
PDLIM1-202ENST00000477757 GPR98Q8WXG9 6306 aa8.72□□□□□ -1.01
PDLIM1-202ENST00000477757 HSD52Q0P140 79 aa8.71□□□□□ -1.02
PDLIM1-202ENST00000477757 LCA10Q71F78 164 aa8.71□□□□□ -1.02
PDLIM1-202ENST00000477757 KRTAP3-1Q9BYR8 98 aa8.71□□□□□ -1.02
PDLIM1-202ENST00000477757 K7EQZ3 153 aa8.69□□□□□ -1.02
PDLIM1-202ENST00000477757 JMJD7-PLA2G4BH0Y9G9 81 aa8.67□□□□□ -1.02
PDLIM1-202ENST00000477757 SCGB1C2P0DMR2 95 aa8.67□□□□□ -1.02
PDLIM1-202ENST00000477757 NREPQ16612 68 aa8.67□□□□□ -1.02
PDLIM1-202ENST00000477757 SPRR2DP22532 72 aa8.66□□□□□ -1.02
PDLIM1-202ENST00000477757 PDE6GP18545 87 aa8.65□□□□□ -1.02
PDLIM1-202ENST00000477757 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
PDLIM1-202ENST00000477757 CRIPTQ9P021 101 aa8.64□□□□□ -1.03
PDLIM1-202ENST00000477757 S100A1P23297 94 aa8.63□□□□□ -1.03
PDLIM1-202ENST00000477757 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
PDLIM1-202ENST00000477757 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
PDLIM1-202ENST00000477757 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
PDLIM1-202ENST00000477757 PRO2289Q9P1D8 64 aa8.55□□□□□ -1.04
PDLIM1-202ENST00000477757 CXCL6P80162 114 aa8.53□□□□□ -1.04
PDLIM1-202ENST00000477757 ATXN8Q156A1 80 aa8.52□□□□□ -1.05
PDLIM1-202ENST00000477757 MT1XP80297 61 aa8.51□□□□□ -1.05
PDLIM1-202ENST00000477757 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
PDLIM1-202ENST00000477757 LCE3BQ5TA77 95 aa8.47□□□□□ -1.05
PDLIM1-202ENST00000477757 BPY2O14599 106 aa8.46□□□□□ -1.06
PDLIM1-202ENST00000477757 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
PDLIM1-202ENST00000477757 Q8N9L7 120 aa8.43□□□□□ -1.06
PDLIM1-202ENST00000477757 UQCR10Q9UDW1 63 aa8.35□□□□□ -1.07
PDLIM1-202ENST00000477757 KRTAP4-8A0A0G2JLE6 195 aa8.34□□□□□ -1.07
PDLIM1-202ENST00000477757 KRTAP4-8Q9BYQ9 185 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms