RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-204ENST00000476862 M0R143 59 aa9.18□□□□□ -0.94
ABCB1-204ENST00000476862 NOTCH2NLQ7Z3S9 236 aa9.18□□□□□ -0.94
ABCB1-204ENST00000476862 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
ABCB1-204ENST00000476862 NDUFB1O75438 58 aa9.16□□□□□ -0.94
ABCB1-204ENST00000476862 ATXN8Q156A1 80 aa9.16□□□□□ -0.94
ABCB1-204ENST00000476862 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
ABCB1-204ENST00000476862 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
ABCB1-204ENST00000476862 JMJD7-PLA2G4BH0Y9G9 81 aa9.14□□□□□ -0.95
ABCB1-204ENST00000476862 Q6ZQT0 140 aa9.1□□□□□ -0.95
ABCB1-204ENST00000476862 MTURNQ8N3F0 131 aa9.1□□□□□ -0.95
ABCB1-204ENST00000476862 LYRM7Q5U5X0 104 aa9.09□□□□□ -0.95
ABCB1-204ENST00000476862 PDE6GP18545 87 aa9.08□□□□□ -0.96
ABCB1-204ENST00000476862 NAA38Q9BRA0 125 aaKnown RBP9.08□□□□□ -0.96
ABCB1-204ENST00000476862 A0A1B0GW54 56 aa9.07□□□□□ -0.96
ABCB1-204ENST00000476862 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
ABCB1-204ENST00000476862 HRES1P13985 223 aa9.04□□□□□ -0.96
ABCB1-204ENST00000476862 LOC110117498A0A087WWA1 95 aa9.03□□□□□ -0.96
ABCB1-204ENST00000476862 A8MWP4 228 aa9.01□□□□□ -0.97
ABCB1-204ENST00000476862 MPLKIPQ8TAP9 179 aa9□□□□□ -0.97
ABCB1-204ENST00000476862 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
ABCB1-204ENST00000476862 SMIM6P0DI80 62 aa8.99□□□□□ -0.97
ABCB1-204ENST00000476862 NREPQ16612 68 aa8.99□□□□□ -0.97
ABCB1-204ENST00000476862 C14orf132Q9NPU4 83 aa8.99□□□□□ -0.97
ABCB1-204ENST00000476862 C8orf17Q9NRJ1 99 aa8.99□□□□□ -0.97
ABCB1-204ENST00000476862 TSTD3H0UI37 97 aa8.98□□□□□ -0.97
ABCB1-204ENST00000476862 SPINK7P58062 85 aa8.98□□□□□ -0.97
ABCB1-204ENST00000476862 BATFQ16520 125 aa8.98□□□□□ -0.97
ABCB1-204ENST00000476862 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
ABCB1-204ENST00000476862 Q6ZVQ6 151 aa8.94□□□□□ -0.98
ABCB1-204ENST00000476862 IGKV3D-7A0A0C4DH55 119 aa8.93□□□□□ -0.98
ABCB1-204ENST00000476862 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
ABCB1-204ENST00000476862 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
ABCB1-204ENST00000476862 MT2AP02795 61 aa8.88□□□□□ -0.99
ABCB1-204ENST00000476862 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
ABCB1-204ENST00000476862 H3BT86 120 aa8.86□□□□□ -0.99
ABCB1-204ENST00000476862 NDUFS5O43920 106 aa8.86□□□□□ -0.99
ABCB1-204ENST00000476862 MRPL34Q9BQ48 92 aaKnown RBP8.86□□□□□ -0.99
ABCB1-204ENST00000476862 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
ABCB1-204ENST00000476862 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
ABCB1-204ENST00000476862 hDV103S1A0JD37 113 aa8.82□□□□□ -1
ABCB1-204ENST00000476862 MMP24-AS1A0A0U1RRL7 71 aa8.81□□□□□ -1
ABCB1-204ENST00000476862 A0A1W2PPM0 123 aa8.81□□□□□ -1
ABCB1-204ENST00000476862 BPY2O14599 106 aa8.81□□□□□ -1
ABCB1-204ENST00000476862 MT1FP04733 61 aa8.8□□□□□ -1
ABCB1-204ENST00000476862 K7EQZ3 153 aa8.78□□□□□ -1
ABCB1-204ENST00000476862 TAX1BP3O14907 124 aa8.76□□□□□ -1.01
ABCB1-204ENST00000476862 USH2AO75445 5202 aa8.73□□□□□ -1.01
ABCB1-204ENST00000476862 KRTAP9-3Q9BYQ3 159 aa8.72□□□□□ -1.01
ABCB1-204ENST00000476862 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
ABCB1-204ENST00000476862 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
ABCB1-204ENST00000476862 SPCS1Q9Y6A9 102 aa8.7□□□□□ -1.02
ABCB1-204ENST00000476862 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
ABCB1-204ENST00000476862 LCE2BO14633 110 aa8.68□□□□□ -1.02
ABCB1-204ENST00000476862 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
ABCB1-204ENST00000476862 C7orf65Q6ZTY9 151 aa8.68□□□□□ -1.02
ABCB1-204ENST00000476862 LINC00846Q9NV44 126 aa8.68□□□□□ -1.02
ABCB1-204ENST00000476862 LOC105371267A0A1B0GV96 52 aa8.66□□□□□ -1.02
ABCB1-204ENST00000476862 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.65□□□□□ -1.02
ABCB1-204ENST00000476862 HCG22E2RYF7 251 aa8.65□□□□□ -1.02
ABCB1-204ENST00000476862 SSPOA2VEC9 5147 aa8.64□□□□□ -1.03
ABCB1-204ENST00000476862 Q8N9L7 120 aa8.63□□□□□ -1.03
ABCB1-204ENST00000476862 UBL5Q9BZL1 73 aa8.63□□□□□ -1.03
ABCB1-204ENST00000476862 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
ABCB1-204ENST00000476862 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
ABCB1-204ENST00000476862 CXCL6P80162 114 aa8.6□□□□□ -1.03
ABCB1-204ENST00000476862 Q5W150 140 aa8.6□□□□□ -1.03
ABCB1-204ENST00000476862 COL5A1-AS1Q5SY13 56 aa8.59□□□□□ -1.03
ABCB1-204ENST00000476862 SMCPP49901 116 aaPredicted RBP8.55□□□□□ -1.04
ABCB1-204ENST00000476862 C4orf26Q17RF5 130 aa8.52□□□□□ -1.05
ABCB1-204ENST00000476862 FCGBPQ9Y6R7 5405 aaPredicted RBP8.51□□□□□ -1.05
ABCB1-204ENST00000476862 K7EP34 96 aa8.5□□□□□ -1.05
ABCB1-204ENST00000476862 GTF2H5Q6ZYL4 71 aa8.47□□□□□ -1.05
ABCB1-204ENST00000476862 PRO0461Q9UI25 63 aa8.47□□□□□ -1.05
ABCB1-204ENST00000476862 KRTAP19-6Q3LI70 58 aa8.43□□□□□ -1.06
ABCB1-204ENST00000476862 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
ABCB1-204ENST00000476862 C5orf47Q569G3 176 aa8.41□□□□□ -1.06
ABCB1-204ENST00000476862 FAM236AA0A1B0GUQ0 79 aa8.4□□□□□ -1.06
ABCB1-204ENST00000476862 FAM236BA0A1B0GV22 79 aa8.4□□□□□ -1.06
ABCB1-204ENST00000476862 F8W1H4 67 aa8.39□□□□□ -1.07
ABCB1-204ENST00000476862 S4R3F8 94 aa8.39□□□□□ -1.07
ABCB1-204ENST00000476862 C1orf64Q8NEQ6 169 aa8.38□□□□□ -1.07
ABCB1-204ENST00000476862 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
ABCB1-204ENST00000476862 ETDBQ3ZM63 59 aa8.34□□□□□ -1.07
ABCB1-204ENST00000476862 PCP4L1A6NKN8 68 aa8.31□□□□□ -1.08
ABCB1-204ENST00000476862 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
ABCB1-204ENST00000476862 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
ABCB1-204ENST00000476862 LCA10Q71F78 164 aa8.26□□□□□ -1.09
ABCB1-204ENST00000476862 SYNE2Q8WXH0 6885 aaKnown RBP8.23□□□□□ -1.09
ABCB1-204ENST00000476862 ACYP1P07311 99 aa8.23□□□□□ -1.09
ABCB1-204ENST00000476862 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
ABCB1-204ENST00000476862 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
ABCB1-204ENST00000476862 LOC101927531A0A1B0GV80 90 aa8.19□□□□□ -1.1
ABCB1-204ENST00000476862 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
ABCB1-204ENST00000476862 Q5VV11 94 aa8.17□□□□□ -1.1
ABCB1-204ENST00000476862 ATP5EP2Q5VTU8 51 aa8.15□□□□□ -1.1
ABCB1-204ENST00000476862 A6NN06 94 aa8.13□□□□□ -1.11
ABCB1-204ENST00000476862 KLKP1Q107X0 134 aa8.13□□□□□ -1.11
ABCB1-204ENST00000476862 FAM240AA0A1B0GVK7 77 aa8.11□□□□□ -1.11
ABCB1-204ENST00000476862 ATOX1O00244 68 aa8.11□□□□□ -1.11
ABCB1-204ENST00000476862 UQCRQO14949 82 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms