RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 C9orf118A6NHY6 69 aa12.45□□□□□ -0.42
CPNE1-223ENST00000475146 C14orf132Q9NPU4 83 aa12.45□□□□□ -0.42
CPNE1-223ENST00000475146 J3KT08 172 aa12.44□□□□□ -0.42
CPNE1-223ENST00000475146 PDE6GP18545 87 aa12.44□□□□□ -0.42
CPNE1-223ENST00000475146 C8orf87E5RJ46 101 aa12.43□□□□□ -0.42
CPNE1-223ENST00000475146 TAX1BP3O14907 124 aa12.42□□□□□ -0.42
CPNE1-223ENST00000475146 M0R2T5 61 aa12.41□□□□□ -0.42
CPNE1-223ENST00000475146 A0A1B0GW54 56 aa12.39□□□□□ -0.43
CPNE1-223ENST00000475146 A0A1W2PPM0 123 aa12.39□□□□□ -0.43
CPNE1-223ENST00000475146 MTURNQ8N3F0 131 aa12.36□□□□□ -0.43
CPNE1-223ENST00000475146 NDUFB1O75438 58 aa12.35□□□□□ -0.43
CPNE1-223ENST00000475146 H3BT86 120 aa12.34□□□□□ -0.43
CPNE1-223ENST00000475146 KRTAP10-6P60371 365 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-223ENST00000475146 A8MWP4 228 aa12.29□□□□□ -0.44
CPNE1-223ENST00000475146 LORP23490 312 aaPredicted RBP12.27□□□□□ -0.45
CPNE1-223ENST00000475146 NREPQ16612 68 aa12.27□□□□□ -0.45
CPNE1-223ENST00000475146 LCE2DQ5TA82 110 aaPredicted RBP12.26□□□□□ -0.45
CPNE1-223ENST00000475146 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
CPNE1-223ENST00000475146 IGKV3D-7A0A0C4DH55 119 aa12.24□□□□□ -0.45
CPNE1-223ENST00000475146 C8orf17Q9NRJ1 99 aa12.24□□□□□ -0.45
CPNE1-223ENST00000475146 FLGP20930 4061 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-223ENST00000475146 ZCCHC13Q8WW36 166 aaKnown RBP12.2□□□□□ -0.46
CPNE1-223ENST00000475146 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
CPNE1-223ENST00000475146 FAM236DA0A1B0GTK5 79 aa12.18□□□□□ -0.46
CPNE1-223ENST00000475146 FAM236CP0DP71 79 aa12.18□□□□□ -0.46
CPNE1-223ENST00000475146 PRR15Q8IV56 129 aa12.17□□□□□ -0.46
CPNE1-223ENST00000475146 Q8N9P0 234 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-223ENST00000475146 HRES1P13985 223 aa12.15□□□□□ -0.46
CPNE1-223ENST00000475146 Q6ZVQ6 151 aa12.14□□□□□ -0.47
CPNE1-223ENST00000475146 RBM12B-AS1Q9P1G2 102 aa12.14□□□□□ -0.47
CPNE1-223ENST00000475146 KRTAP9-6A0A140TA67 174 aa12.12□□□□□ -0.47
CPNE1-223ENST00000475146 SMCPP49901 116 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-223ENST00000475146 MPLKIPQ8TAP9 179 aa12.09□□□□□ -0.47
CPNE1-223ENST00000475146 MMP24-AS1A0A0U1RRL7 71 aa12.08□□□□□ -0.48
CPNE1-223ENST00000475146 K7EQZ3 153 aa12.07□□□□□ -0.48
CPNE1-223ENST00000475146 BPY2O14599 106 aa12.07□□□□□ -0.48
CPNE1-223ENST00000475146 K7EP34 96 aa12.06□□□□□ -0.48
CPNE1-223ENST00000475146 SPINK7P58062 85 aa12.06□□□□□ -0.48
CPNE1-223ENST00000475146 TMEM254Q8TBM7 123 aa12.05□□□□□ -0.48
CPNE1-223ENST00000475146 MRPL34Q9BQ48 92 aaKnown RBP12.04□□□□□ -0.48
CPNE1-223ENST00000475146 PRO0461Q9UI25 63 aa12.02□□□□□ -0.49
CPNE1-223ENST00000475146 hDV103S1A0JD37 113 aa12.01□□□□□ -0.49
CPNE1-223ENST00000475146 PCP4L1A6NKN8 68 aa12□□□□□ -0.49
CPNE1-223ENST00000475146 NDUFS5O43920 106 aa11.98□□□□□ -0.49
CPNE1-223ENST00000475146 Q8N9L7 120 aa11.94□□□□□ -0.5
CPNE1-223ENST00000475146 GTF2H5Q6ZYL4 71 aa11.93□□□□□ -0.5
CPNE1-223ENST00000475146 WFDC13Q8IUB5 93 aa11.92□□□□□ -0.5
CPNE1-223ENST00000475146 CRCT1Q9UGL9 99 aa11.91□□□□□ -0.5
CPNE1-223ENST00000475146 UBL5Q9BZL1 73 aa11.9□□□□□ -0.5
CPNE1-223ENST00000475146 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
CPNE1-223ENST00000475146 KRTAP9-8Q9BYQ0 159 aa11.88□□□□□ -0.51
CPNE1-223ENST00000475146 CASC2Q6XLA1 102 aa11.86□□□□□ -0.51
CPNE1-223ENST00000475146 FSIP2Q5CZC0 6907 aa11.85□□□□□ -0.51
CPNE1-223ENST00000475146 F8W1H4 67 aa11.81□□□□□ -0.52
CPNE1-223ENST00000475146 HCG22E2RYF7 251 aa11.8□□□□□ -0.52
CPNE1-223ENST00000475146 IGKV2D-30A0A075B6S6 120 aa11.77□□□□□ -0.53
CPNE1-223ENST00000475146 IGKV2-30P06310 120 aa11.77□□□□□ -0.53
CPNE1-223ENST00000475146 ETDBQ3ZM63 59 aa11.77□□□□□ -0.53
CPNE1-223ENST00000475146 Q5W150 140 aa11.77□□□□□ -0.53
CPNE1-223ENST00000475146 MT2AP02795 61 aa11.75□□□□□ -0.53
CPNE1-223ENST00000475146 C7orf65Q6ZTY9 151 aa11.73□□□□□ -0.53
CPNE1-223ENST00000475146 CXCL6P80162 114 aa11.7□□□□□ -0.54
CPNE1-223ENST00000475146 MT1FP04733 61 aa11.66□□□□□ -0.54
CPNE1-223ENST00000475146 KRTAP10-10P60014 251 aa11.64□□□□□ -0.55
CPNE1-223ENST00000475146 H1FX-AS1Q4G0G2 97 aa11.62□□□□□ -0.55
CPNE1-223ENST00000475146 C4orf26Q17RF5 130 aa11.53□□□□□ -0.56
CPNE1-223ENST00000475146 KRTAP9-3Q9BYQ3 159 aa11.5□□□□□ -0.57
CPNE1-223ENST00000475146 TP53AIP1Q9HCN2 124 aa11.5□□□□□ -0.57
CPNE1-223ENST00000475146 ACYP1P07311 99 aa11.49□□□□□ -0.57
CPNE1-223ENST00000475146 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
CPNE1-223ENST00000475146 LCE2BO14633 110 aa11.43□□□□□ -0.58
CPNE1-223ENST00000475146 USH2AO75445 5202 aa11.39□□□□□ -0.59
CPNE1-223ENST00000475146 ATP5EP2Q5VTU8 51 aa11.39□□□□□ -0.59
CPNE1-223ENST00000475146 HIST1H4AP62805 103 aaKnown RBP11.34□□□□□ -0.59
CPNE1-223ENST00000475146 C1orf64Q8NEQ6 169 aa11.33□□□□□ -0.6
CPNE1-223ENST00000475146 A0A1B0GV90 55 aa11.32□□□□□ -0.6
CPNE1-223ENST00000475146 KRTAP3-1Q9BYR8 98 aa11.3□□□□□ -0.6
CPNE1-223ENST00000475146 TRAV22A0A0B4J277 110 aa11.28□□□□□ -0.6
CPNE1-223ENST00000475146 SSPOA2VEC9 5147 aa11.27□□□□□ -0.6
CPNE1-223ENST00000475146 C5orf47Q569G3 176 aa11.27□□□□□ -0.61
CPNE1-223ENST00000475146 S4R3F8 94 aa11.27□□□□□ -0.61
CPNE1-223ENST00000475146 CYP4F30PQ9H0H9 118 aa11.25□□□□□ -0.61
CPNE1-223ENST00000475146 LINC00643Q86TS7 51 aa11.23□□□□□ -0.61
CPNE1-223ENST00000475146 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.61
CPNE1-223ENST00000475146 KRTAP19-1Q8IUB9 90 aa11.21□□□□□ -0.61
CPNE1-223ENST00000475146 UQCRQO14949 82 aa11.19□□□□□ -0.62
CPNE1-223ENST00000475146 A0A087WVE0 104 aa11.18□□□□□ -0.62
CPNE1-223ENST00000475146 LCA10Q71F78 164 aa11.17□□□□□ -0.62
CPNE1-223ENST00000475146 CSAG1Q6PB30 78 aa11.15□□□□□ -0.62
CPNE1-223ENST00000475146 H0Y9P7 68 aa11.14□□□□□ -0.63
CPNE1-223ENST00000475146 FAM236AA0A1B0GUQ0 79 aa11.11□□□□□ -0.63
CPNE1-223ENST00000475146 FAM236BA0A1B0GV22 79 aa11.11□□□□□ -0.63
CPNE1-223ENST00000475146 ATOX1O00244 68 aa11.11□□□□□ -0.63
CPNE1-223ENST00000475146 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.08□□□□□ -0.64
CPNE1-223ENST00000475146 J3QR89 54 aa11.04□□□□□ -0.64
CPNE1-223ENST00000475146 FCGBPQ9Y6R7 5405 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-223ENST00000475146 KRTAP19-6Q3LI70 58 aa11.01□□□□□ -0.65
CPNE1-223ENST00000475146 KRTAP3-3Q9BYR6 98 aa10.98□□□□□ -0.65
CPNE1-223ENST00000475146 LINC00208Q96KT6 92 aa10.97□□□□□ -0.65
CPNE1-223ENST00000475146 OCR1Q9BZK8 76 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms