RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 H3BQ85 93 aa6.79□□□□□ -1.32
EPCAM-205ENST00000474691 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
EPCAM-205ENST00000474691 NOTCH2NLQ7Z3S9 236 aa6.79□□□□□ -1.32
EPCAM-205ENST00000474691 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
EPCAM-205ENST00000474691 ORMDL1Q9P0S3 153 aa6.78□□□□□ -1.32
EPCAM-205ENST00000474691 C8orf87E5RJ46 101 aa6.76□□□□□ -1.33
EPCAM-205ENST00000474691 DLEU1O43261 78 aa6.76□□□□□ -1.33
EPCAM-205ENST00000474691 CCKP06307 115 aa6.76□□□□□ -1.33
EPCAM-205ENST00000474691 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
EPCAM-205ENST00000474691 LYRM7Q5U5X0 104 aa6.75□□□□□ -1.33
EPCAM-205ENST00000474691 C14orf144Q96I85 54 aa6.75□□□□□ -1.33
EPCAM-205ENST00000474691 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
EPCAM-205ENST00000474691 A8MWP4 228 aa6.74□□□□□ -1.33
EPCAM-205ENST00000474691 TMEM256-PLSCR3K7ERE1 68 aa6.74□□□□□ -1.33
EPCAM-205ENST00000474691 PSMB2P49721 201 aa6.73□□□□□ -1.33
EPCAM-205ENST00000474691 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
EPCAM-205ENST00000474691 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
EPCAM-205ENST00000474691 SPINK7P58062 85 aa6.72□□□□□ -1.33
EPCAM-205ENST00000474691 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
EPCAM-205ENST00000474691 A0A1B0GVX0 72 aa6.71□□□□□ -1.34
EPCAM-205ENST00000474691 COX6CP09669 75 aa6.71□□□□□ -1.34
EPCAM-205ENST00000474691 CEND1Q8N111 149 aa6.71□□□□□ -1.34
EPCAM-205ENST00000474691 TRIAP1O43715 76 aa6.7□□□□□ -1.34
EPCAM-205ENST00000474691 S100A1P23297 94 aa6.7□□□□□ -1.34
EPCAM-205ENST00000474691 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
EPCAM-205ENST00000474691 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
EPCAM-205ENST00000474691 PAM16Q9Y3D7 125 aa6.69□□□□□ -1.34
EPCAM-205ENST00000474691 NDUFB1O75438 58 aa6.68□□□□□ -1.34
EPCAM-205ENST00000474691 J3KT08 172 aa6.67□□□□□ -1.34
EPCAM-205ENST00000474691 WFDC13Q8IUB5 93 aa6.66□□□□□ -1.34
EPCAM-205ENST00000474691 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
EPCAM-205ENST00000474691 DSCR8Q96T75 97 aa6.66□□□□□ -1.34
EPCAM-205ENST00000474691 VAMP8Q9BV40 100 aa6.66□□□□□ -1.34
EPCAM-205ENST00000474691 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.34
EPCAM-205ENST00000474691 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.34
EPCAM-205ENST00000474691 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
EPCAM-205ENST00000474691 UBE2V1Q13404 147 aa6.64□□□□□ -1.35
EPCAM-205ENST00000474691 C2orf91Q6ZV80 131 aa6.63□□□□□ -1.35
EPCAM-205ENST00000474691 FXYD2P54710 66 aa6.62□□□□□ -1.35
EPCAM-205ENST00000474691 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
EPCAM-205ENST00000474691 KRTAP6-3Q3LI67 103 aa6.6□□□□□ -1.35
EPCAM-205ENST00000474691 C9JAW5 83 aa6.59□□□□□ -1.35
EPCAM-205ENST00000474691 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
EPCAM-205ENST00000474691 K7ERJ3 54 aa6.56□□□□□ -1.36
EPCAM-205ENST00000474691 IGKV3D-7A0A0C4DH55 119 aa6.55□□□□□ -1.36
EPCAM-205ENST00000474691 HSD52Q0P140 79 aa6.55□□□□□ -1.36
EPCAM-205ENST00000474691 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
EPCAM-205ENST00000474691 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
EPCAM-205ENST00000474691 Q6ZQT0 140 aa6.53□□□□□ -1.36
EPCAM-205ENST00000474691 Q6ZVQ6 151 aa6.52□□□□□ -1.37
EPCAM-205ENST00000474691 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
EPCAM-205ENST00000474691 NDUFS5O43920 106 aa6.49□□□□□ -1.37
EPCAM-205ENST00000474691 A0A1B0GW54 56 aa6.46□□□□□ -1.38
EPCAM-205ENST00000474691 JMJD7-PLA2G4BH0Y9G9 81 aa6.46□□□□□ -1.38
EPCAM-205ENST00000474691 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
EPCAM-205ENST00000474691 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 FAM236AA0A1B0GUQ0 79 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 FAM236BA0A1B0GV22 79 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 PDE6GP18545 87 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 NREPQ16612 68 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
EPCAM-205ENST00000474691 A6NN06 94 aa6.41□□□□□ -1.38
EPCAM-205ENST00000474691 ATXN8Q156A1 80 aa6.41□□□□□ -1.38
EPCAM-205ENST00000474691 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
EPCAM-205ENST00000474691 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
EPCAM-205ENST00000474691 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
EPCAM-205ENST00000474691 LOC110117498A0A087WWA1 95 aa6.38□□□□□ -1.39
EPCAM-205ENST00000474691 MMP24-AS1A0A0U1RRL7 71 aa6.36□□□□□ -1.39
EPCAM-205ENST00000474691 C14orf132Q9NPU4 83 aa6.36□□□□□ -1.39
EPCAM-205ENST00000474691 C5orf47Q569G3 176 aa6.33□□□□□ -1.4
EPCAM-205ENST00000474691 PYY3Q5JQD4 70 aa6.33□□□□□ -1.4
EPCAM-205ENST00000474691 Q5VV11 94 aa6.33□□□□□ -1.4
EPCAM-205ENST00000474691 K7EQZ3 153 aa6.31□□□□□ -1.4
EPCAM-205ENST00000474691 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
EPCAM-205ENST00000474691 C4orf26Q17RF5 130 aa6.3□□□□□ -1.4
EPCAM-205ENST00000474691 BPY2O14599 106 aa6.28□□□□□ -1.4
EPCAM-205ENST00000474691 NAA38Q9BRA0 125 aaKnown RBP6.27□□□□□ -1.41
EPCAM-205ENST00000474691 CSAG1Q6PB30 78 aa6.26□□□□□ -1.41
EPCAM-205ENST00000474691 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
EPCAM-205ENST00000474691 HCG22E2RYF7 251 aa6.25□□□□□ -1.41
EPCAM-205ENST00000474691 M0R143 59 aa6.25□□□□□ -1.41
EPCAM-205ENST00000474691 Q5W150 140 aa6.25□□□□□ -1.41
EPCAM-205ENST00000474691 IMUPQ9GZP8 106 aa6.25□□□□□ -1.41
EPCAM-205ENST00000474691 S4R3F8 94 aa6.25□□□□□ -1.41
EPCAM-205ENST00000474691 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
EPCAM-205ENST00000474691 NEBP20929 6669 aa6.23□□□□□ -1.41
EPCAM-205ENST00000474691 C9orf118A6NHY6 69 aa6.21□□□□□ -1.42
EPCAM-205ENST00000474691 MT1BP07438 61 aa6.21□□□□□ -1.42
EPCAM-205ENST00000474691 CXCL6P80162 114 aa6.21□□□□□ -1.42
EPCAM-205ENST00000474691 TSTD3H0UI37 97 aa6.19□□□□□ -1.42
EPCAM-205ENST00000474691 KRTAP10-5P60370 271 aa6.17□□□□□ -1.42
EPCAM-205ENST00000474691 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
EPCAM-205ENST00000474691 C1orf64Q8NEQ6 169 aa6.17□□□□□ -1.42
EPCAM-205ENST00000474691 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
EPCAM-205ENST00000474691 Q8N9L7 120 aa6.15□□□□□ -1.42
EPCAM-205ENST00000474691 KLKP1Q107X0 134 aa6.14□□□□□ -1.43
EPCAM-205ENST00000474691 LCA10Q71F78 164 aa6.14□□□□□ -1.43
EPCAM-205ENST00000474691 MUC12Q9UKN1 5478 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms