RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SS18L2Q9UHA2 77 aa2.49□□□□□ -2.01
SNRNP40-204ENST00000474025 PSPHP1O15172 72 aa2.48□□□□□ -2.01
SNRNP40-204ENST00000474025 NDUFS5O43920 106 aa2.48□□□□□ -2.01
SNRNP40-204ENST00000474025 PPDPFLQ8WWR9 84 aa2.48□□□□□ -2.01
SNRNP40-204ENST00000474025 A0A087WSZ3 146 aa2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 A0A1B0GV90 55 aa2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 KRTAP10-7P60409 375 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 RPS28P62857 69 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 COA6Q5JTJ3 125 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 C12orf57Q99622 126 aa2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 VPS25Q9BRG1 176 aa2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
SNRNP40-204ENST00000474025 KMT2DO14686 5537 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 DLEU1O43261 78 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 C3orf79P0CE67 100 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 NDUFV3P56181 108 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 TEN1Q86WV5 123 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 SNHG12Q9BXW3 62 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
SNRNP40-204ENST00000474025 COLCA2A8K830 154 aa2.45□□□□□ -2.02
SNRNP40-204ENST00000474025 A8MWP4 228 aa2.45□□□□□ -2.02
SNRNP40-204ENST00000474025 LINC00313P59037 77 aa2.45□□□□□ -2.02
SNRNP40-204ENST00000474025 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BKO60814 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BJP06899 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 SMIM6P0DI80 62 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BOP23527 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BBP33778 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BDP58876 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BCP62807 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST2H2BEQ16778 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BHQ93079 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BNQ99877 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 HIST1H2BMQ99879 126 aa2.44□□□□□ -2.02
SNRNP40-204ENST00000474025 A0A1B0GX51 115 aa2.43□□□□□ -2.02
SNRNP40-204ENST00000474025 K7ERU9 68 aa2.43□□□□□ -2.02
SNRNP40-204ENST00000474025 KRTDAPP60985 99 aa2.43□□□□□ -2.02
SNRNP40-204ENST00000474025 BVES-AS1Q5T3Y7 98 aa2.43□□□□□ -2.02
SNRNP40-204ENST00000474025 ATOH7Q8N100 152 aa2.43□□□□□ -2.02
SNRNP40-204ENST00000474025 SMIM26A0A096LP01 95 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 IGHV6-1A0A0B4J1U7 121 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 A0A1W2PNM2 257 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 IGKV4-1P06312 121 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 MP68P56378 58 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 ANKRD29Q8N6D5 301 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 ANAPC13Q9BS18 74 aa2.42□□□□□ -2.02
SNRNP40-204ENST00000474025 H3BMG7 143 aa2.41□□□□□ -2.02
SNRNP40-204ENST00000474025 J3KT08 172 aa2.41□□□□□ -2.02
SNRNP40-204ENST00000474025 SCGB1C2P0DMR2 95 aa2.41□□□□□ -2.02
SNRNP40-204ENST00000474025 SPINK7P58062 85 aa2.41□□□□□ -2.02
SNRNP40-204ENST00000474025 ZCCHC13Q8WW36 166 aaKnown RBP2.4□□□□□ -2.03
SNRNP40-204ENST00000474025 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.03
SNRNP40-204ENST00000474025 KRTAP5-9P26371 169 aa2.39□□□□□ -2.03
SNRNP40-204ENST00000474025 DEFB116Q30KQ4 102 aa2.39□□□□□ -2.03
SNRNP40-204ENST00000474025 WFDC13Q8IUB5 93 aa2.39□□□□□ -2.03
SNRNP40-204ENST00000474025 IGKV2D-30A0A075B6S6 120 aa2.38□□□□□ -2.03
SNRNP40-204ENST00000474025 TRBV7-4A0A0J9YYF1 115 aa2.38□□□□□ -2.03
SNRNP40-204ENST00000474025 SNCGO76070 127 aa2.38□□□□□ -2.03
SNRNP40-204ENST00000474025 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
SNRNP40-204ENST00000474025 C14orf144Q96I85 54 aa2.38□□□□□ -2.03
SNRNP40-204ENST00000474025 A0A1B0GVX0 72 aa2.37□□□□□ -2.03
SNRNP40-204ENST00000474025 A6NN06 94 aa2.37□□□□□ -2.03
SNRNP40-204ENST00000474025 H0YGX0 51 aa2.37□□□□□ -2.03
SNRNP40-204ENST00000474025 FABP2P12104 132 aa2.37□□□□□ -2.03
SNRNP40-204ENST00000474025 RAB37Q96AX2 223 aa2.37□□□□□ -2.03
SNRNP40-204ENST00000474025 IMUPQ9GZP8 106 aa2.37□□□□□ -2.03
SNRNP40-204ENST00000474025 C9JAW5 83 aa2.36□□□□□ -2.03
SNRNP40-204ENST00000474025 J3QR89 54 aa2.36□□□□□ -2.03
SNRNP40-204ENST00000474025 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
SNRNP40-204ENST00000474025 TRACP01848 142 aa2.35□□□□□ -2.03
SNRNP40-204ENST00000474025 MT1BP07438 61 aa2.35□□□□□ -2.03
SNRNP40-204ENST00000474025 CXCL6P80162 114 aa2.35□□□□□ -2.03
SNRNP40-204ENST00000474025 LYRM7Q5U5X0 104 aa2.35□□□□□ -2.03
SNRNP40-204ENST00000474025 CAMK2N1Q7Z7J9 78 aa2.35□□□□□ -2.03
SNRNP40-204ENST00000474025 A0A0B4J2C4 111 aa2.34□□□□□ -2.03
SNRNP40-204ENST00000474025 CCKP06307 115 aa2.34□□□□□ -2.03
SNRNP40-204ENST00000474025 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
SNRNP40-204ENST00000474025 A0A1B0GW54 56 aa2.33□□□□□ -2.04
SNRNP40-204ENST00000474025 KRTAP10-5P60370 271 aa2.33□□□□□ -2.04
SNRNP40-204ENST00000474025 COX8AP10176 69 aa2.32□□□□□ -2.04
SNRNP40-204ENST00000474025 ORMDL1Q9P0S3 153 aa2.32□□□□□ -2.04
SNRNP40-204ENST00000474025 DNAL4O96015 105 aa2.31□□□□□ -2.04
SNRNP40-204ENST00000474025 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
SNRNP40-204ENST00000474025 Q5VV11 94 aa2.31□□□□□ -2.04
SNRNP40-204ENST00000474025 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
SNRNP40-204ENST00000474025 HIST1H2BLQ99880 126 aa2.31□□□□□ -2.04
SNRNP40-204ENST00000474025 IGKV3D-7A0A0C4DH55 119 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 A8MUN3 132 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 H3BQ85 93 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 TMEM256-PLSCR3K7ERE1 68 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 M0R143 59 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 MT3P25713 68 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 PRR15Q8IV56 129 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 DSCR8Q96T75 97 aa2.3□□□□□ -2.04
SNRNP40-204ENST00000474025 SPRR2GQ9BYE4 73 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms