RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 JMJD7-PLA2G4BH0Y9G9 81 aa6.05□□□□□ -1.44
CPNE1-222ENST00000473373 C21orf62-AS1Q17RA5 79 aa6.05□□□□□ -1.44
CPNE1-222ENST00000473373 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
CPNE1-222ENST00000473373 A8MUU9 505 aa6.04□□□□□ -1.44
CPNE1-222ENST00000473373 MT1HP80294 61 aa6.03□□□□□ -1.44
CPNE1-222ENST00000473373 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
CPNE1-222ENST00000473373 NDUFB1O75438 58 aa6.01□□□□□ -1.45
CPNE1-222ENST00000473373 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
CPNE1-222ENST00000473373 C8orf87E5RJ46 101 aa6□□□□□ -1.45
CPNE1-222ENST00000473373 J3KT08 172 aa6□□□□□ -1.45
CPNE1-222ENST00000473373 C14orf132Q9NPU4 83 aa6□□□□□ -1.45
CPNE1-222ENST00000473373 FAM236DA0A1B0GTK5 79 aa5.99□□□□□ -1.45
CPNE1-222ENST00000473373 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
CPNE1-222ENST00000473373 FAM236CP0DP71 79 aa5.99□□□□□ -1.45
CPNE1-222ENST00000473373 PDE6GP18545 87 aa5.99□□□□□ -1.45
CPNE1-222ENST00000473373 Q6ZQT0 140 aa5.97□□□□□ -1.45
CPNE1-222ENST00000473373 NOTCH2NLQ7Z3S9 236 aa5.97□□□□□ -1.45
CPNE1-222ENST00000473373 LOC110117498A0A087WWA1 95 aa5.96□□□□□ -1.46
CPNE1-222ENST00000473373 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
CPNE1-222ENST00000473373 LOC105371267A0A1B0GV96 52 aa5.95□□□□□ -1.46
CPNE1-222ENST00000473373 C9orf118A6NHY6 69 aa5.95□□□□□ -1.46
CPNE1-222ENST00000473373 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
CPNE1-222ENST00000473373 KRTAP10-6P60371 365 aaPredicted RBP5.95□□□□□ -1.46
CPNE1-222ENST00000473373 A0A1B0GW54 56 aa5.94□□□□□ -1.46
CPNE1-222ENST00000473373 NREPQ16612 68 aa5.94□□□□□ -1.46
CPNE1-222ENST00000473373 MTURNQ8N3F0 131 aa5.94□□□□□ -1.46
CPNE1-222ENST00000473373 RBM12B-AS1Q9P1G2 102 aa5.93□□□□□ -1.46
CPNE1-222ENST00000473373 A0A1W2PPM0 123 aa5.92□□□□□ -1.46
CPNE1-222ENST00000473373 A8MWP4 228 aa5.91□□□□□ -1.46
CPNE1-222ENST00000473373 H3BT86 120 aa5.91□□□□□ -1.46
CPNE1-222ENST00000473373 TAX1BP3O14907 124 aa5.9□□□□□ -1.46
CPNE1-222ENST00000473373 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
CPNE1-222ENST00000473373 ZCCHC13Q8WW36 166 aaKnown RBP5.88□□□□□ -1.47
CPNE1-222ENST00000473373 SPCS1Q9Y6A9 102 aa5.88□□□□□ -1.47
CPNE1-222ENST00000473373 IGKV3D-7A0A0C4DH55 119 aa5.86□□□□□ -1.47
CPNE1-222ENST00000473373 NDUFS5O43920 106 aa5.86□□□□□ -1.47
CPNE1-222ENST00000473373 Q6ZVQ6 151 aa5.86□□□□□ -1.47
CPNE1-222ENST00000473373 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
CPNE1-222ENST00000473373 KRTAP19-4Q3LI73 84 aa5.84□□□□□ -1.47
CPNE1-222ENST00000473373 COL5A1-AS1Q5SY13 56 aa5.84□□□□□ -1.47
CPNE1-222ENST00000473373 PRR15Q8IV56 129 aa5.84□□□□□ -1.47
CPNE1-222ENST00000473373 BPY2O14599 106 aa5.83□□□□□ -1.48
CPNE1-222ENST00000473373 KRTAP4-12Q9BQ66 201 aa5.83□□□□□ -1.48
CPNE1-222ENST00000473373 USH2AO75445 5202 aa5.83□□□□□ -1.48
CPNE1-222ENST00000473373 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
CPNE1-222ENST00000473373 Q8N9P0 234 aaPredicted RBP5.82□□□□□ -1.48
CPNE1-222ENST00000473373 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
CPNE1-222ENST00000473373 HRES1P13985 223 aa5.81□□□□□ -1.48
CPNE1-222ENST00000473373 SPINK7P58062 85 aa5.81□□□□□ -1.48
CPNE1-222ENST00000473373 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
CPNE1-222ENST00000473373 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
CPNE1-222ENST00000473373 K7EQZ3 153 aa5.8□□□□□ -1.48
CPNE1-222ENST00000473373 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
CPNE1-222ENST00000473373 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
CPNE1-222ENST00000473373 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
CPNE1-222ENST00000473373 WFDC13Q8IUB5 93 aa5.78□□□□□ -1.48
CPNE1-222ENST00000473373 FLGP20930 4061 aaPredicted RBP5.77□□□□□ -1.49
CPNE1-222ENST00000473373 PCP4L1A6NKN8 68 aa5.77□□□□□ -1.49
CPNE1-222ENST00000473373 UBL5Q9BZL1 73 aa5.76□□□□□ -1.49
CPNE1-222ENST00000473373 K7EP34 96 aa5.75□□□□□ -1.49
CPNE1-222ENST00000473373 GTF2H5Q6ZYL4 71 aa5.75□□□□□ -1.49
CPNE1-222ENST00000473373 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
CPNE1-222ENST00000473373 CASC2Q6XLA1 102 aa5.73□□□□□ -1.49
CPNE1-222ENST00000473373 Q8N9L7 120 aa5.73□□□□□ -1.49
CPNE1-222ENST00000473373 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
CPNE1-222ENST00000473373 IGKV2-30P06310 120 aa5.72□□□□□ -1.49
CPNE1-222ENST00000473373 HCG22E2RYF7 251 aa5.71□□□□□ -1.5
CPNE1-222ENST00000473373 LCE3BQ5TA77 95 aa5.7□□□□□ -1.5
CPNE1-222ENST00000473373 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
CPNE1-222ENST00000473373 LINC00846Q9NV44 126 aa5.69□□□□□ -1.5
CPNE1-222ENST00000473373 C7orf65Q6ZTY9 151 aa5.68□□□□□ -1.5
CPNE1-222ENST00000473373 PRO0461Q9UI25 63 aa5.68□□□□□ -1.5
CPNE1-222ENST00000473373 F8W1H4 67 aa5.66□□□□□ -1.5
CPNE1-222ENST00000473373 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
CPNE1-222ENST00000473373 KRTAP9-8Q9BYQ0 159 aa5.66□□□□□ -1.5
CPNE1-222ENST00000473373 CXCL6P80162 114 aa5.64□□□□□ -1.51
CPNE1-222ENST00000473373 ETDBQ3ZM63 59 aa5.64□□□□□ -1.51
CPNE1-222ENST00000473373 MT2AP02795 61 aa5.62□□□□□ -1.51
CPNE1-222ENST00000473373 H1FX-AS1Q4G0G2 97 aa5.62□□□□□ -1.51
CPNE1-222ENST00000473373 Q5W150 140 aa5.62□□□□□ -1.51
CPNE1-222ENST00000473373 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
CPNE1-222ENST00000473373 MT1FP04733 61 aa5.58□□□□□ -1.52
CPNE1-222ENST00000473373 C4orf26Q17RF5 130 aa5.57□□□□□ -1.52
CPNE1-222ENST00000473373 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
CPNE1-222ENST00000473373 TP53AIP1Q9HCN2 124 aa5.55□□□□□ -1.52
CPNE1-222ENST00000473373 ACYP1P07311 99 aa5.52□□□□□ -1.53
CPNE1-222ENST00000473373 HIST1H4AP62805 103 aaKnown RBP5.51□□□□□ -1.53
CPNE1-222ENST00000473373 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
CPNE1-222ENST00000473373 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
CPNE1-222ENST00000473373 C1orf64Q8NEQ6 169 aa5.48□□□□□ -1.53
CPNE1-222ENST00000473373 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
CPNE1-222ENST00000473373 FAM236AA0A1B0GUQ0 79 aa5.47□□□□□ -1.53
CPNE1-222ENST00000473373 FAM236BA0A1B0GV22 79 aa5.47□□□□□ -1.53
CPNE1-222ENST00000473373 C5orf47Q569G3 176 aa5.47□□□□□ -1.53
CPNE1-222ENST00000473373 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
CPNE1-222ENST00000473373 S4R3F8 94 aa5.47□□□□□ -1.53
CPNE1-222ENST00000473373 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
CPNE1-222ENST00000473373 FAM240AA0A1B0GVK7 77 aa5.45□□□□□ -1.54
CPNE1-222ENST00000473373 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
CPNE1-222ENST00000473373 LOC101927531A0A1B0GV80 90 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms