RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 DNAL4O96015 105 aa9.02□□□□□ -0.97
SORT1-203ENST00000471996 PSMB2P49721 201 aa9.01□□□□□ -0.97
SORT1-203ENST00000471996 ORMDL1Q9P0S3 153 aa8.99□□□□□ -0.97
SORT1-203ENST00000471996 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
SORT1-203ENST00000471996 TMA7Q9Y2S6 64 aaKnown RBP8.98□□□□□ -0.97
SORT1-203ENST00000471996 K7ERJ3 54 aa8.95□□□□□ -0.98
SORT1-203ENST00000471996 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
SORT1-203ENST00000471996 IGKV4-1P06312 121 aa8.94□□□□□ -0.98
SORT1-203ENST00000471996 TRBV7-4A0A0J9YYF1 115 aa8.92□□□□□ -0.98
SORT1-203ENST00000471996 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
SORT1-203ENST00000471996 UBE2V1Q13404 147 aa8.92□□□□□ -0.98
SORT1-203ENST00000471996 TRACP01848 142 aa8.91□□□□□ -0.98
SORT1-203ENST00000471996 SPINK7P58062 85 aa8.91□□□□□ -0.98
SORT1-203ENST00000471996 MDN1Q9NU22 5596 aa8.9□□□□□ -0.98
SORT1-203ENST00000471996 SCGB1C2P0DMR2 95 aa8.89□□□□□ -0.99
SORT1-203ENST00000471996 A6NN06 94 aa8.87□□□□□ -0.99
SORT1-203ENST00000471996 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
SORT1-203ENST00000471996 KRTAP5-9P26371 169 aa8.85□□□□□ -0.99
SORT1-203ENST00000471996 ZCCHC13Q8WW36 166 aaKnown RBP8.85□□□□□ -0.99
SORT1-203ENST00000471996 KMT2DO14686 5537 aa8.84□□□□□ -0.99
SORT1-203ENST00000471996 CCKP06307 115 aa8.84□□□□□ -0.99
SORT1-203ENST00000471996 DEFB116Q30KQ4 102 aa8.83□□□□□ -1
SORT1-203ENST00000471996 M0R143 59 aa8.82□□□□□ -1
SORT1-203ENST00000471996 RBM3P98179 157 aaKnown RBP8.82□□□□□ -1
SORT1-203ENST00000471996 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
SORT1-203ENST00000471996 C21orf62-AS1Q17RA5 79 aa8.81□□□□□ -1
SORT1-203ENST00000471996 A0A1B0GV72 72 aa8.8□□□□□ -1
SORT1-203ENST00000471996 DSCR8Q96T75 97 aa8.8□□□□□ -1
SORT1-203ENST00000471996 LINC00472Q9H8W2 130 aa8.8□□□□□ -1
SORT1-203ENST00000471996 KRTAP2-3P0C7H8 128 aa8.79□□□□□ -1
SORT1-203ENST00000471996 KRTAP2-4Q9BYR9 128 aa8.79□□□□□ -1
SORT1-203ENST00000471996 BAALC-AS2P0C853 105 aa8.78□□□□□ -1
SORT1-203ENST00000471996 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
SORT1-203ENST00000471996 SMIM6P0DI80 62 aa8.76□□□□□ -1.01
SORT1-203ENST00000471996 C9JAW5 83 aa8.74□□□□□ -1.01
SORT1-203ENST00000471996 ATXN8Q156A1 80 aa8.74□□□□□ -1.01
SORT1-203ENST00000471996 VPS25Q9BRG1 176 aa8.73□□□□□ -1.01
SORT1-203ENST00000471996 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
SORT1-203ENST00000471996 A0A1B0GVX0 72 aa8.71□□□□□ -1.02
SORT1-203ENST00000471996 A0A1B0GW54 56 aa8.71□□□□□ -1.02
SORT1-203ENST00000471996 J3KT08 172 aa8.7□□□□□ -1.02
SORT1-203ENST00000471996 MT1BP07438 61 aa8.7□□□□□ -1.02
SORT1-203ENST00000471996 LYRM7Q5U5X0 104 aa8.69□□□□□ -1.02
SORT1-203ENST00000471996 PDE6GP18545 87 aa8.68□□□□□ -1.02
SORT1-203ENST00000471996 H1FX-AS1Q4G0G2 97 aa8.68□□□□□ -1.02
SORT1-203ENST00000471996 TSTD3H0UI37 97 aa8.67□□□□□ -1.02
SORT1-203ENST00000471996 Q6ZQT0 140 aa8.66□□□□□ -1.02
SORT1-203ENST00000471996 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.02
SORT1-203ENST00000471996 KRTAP10-5P60370 271 aa8.65□□□□□ -1.02
SORT1-203ENST00000471996 NAA38Q9BRA0 125 aaKnown RBP8.64□□□□□ -1.03
SORT1-203ENST00000471996 NDUFB1O75438 58 aa8.62□□□□□ -1.03
SORT1-203ENST00000471996 Q5VV11 94 aa8.62□□□□□ -1.03
SORT1-203ENST00000471996 KRTAP19-8Q3LI54 63 aa8.57□□□□□ -1.04
SORT1-203ENST00000471996 BATFQ16520 125 aa8.56□□□□□ -1.04
SORT1-203ENST00000471996 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
SORT1-203ENST00000471996 C14orf132Q9NPU4 83 aa8.54□□□□□ -1.04
SORT1-203ENST00000471996 IGKV3D-7A0A0C4DH55 119 aa8.52□□□□□ -1.05
SORT1-203ENST00000471996 LOC105371267A0A1B0GV96 52 aa8.52□□□□□ -1.05
SORT1-203ENST00000471996 H3BT86 120 aa8.52□□□□□ -1.05
SORT1-203ENST00000471996 NREPQ16612 68 aa8.51□□□□□ -1.05
SORT1-203ENST00000471996 SPRR2GQ9BYE4 73 aa8.5□□□□□ -1.05
SORT1-203ENST00000471996 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
SORT1-203ENST00000471996 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
SORT1-203ENST00000471996 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
SORT1-203ENST00000471996 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
SORT1-203ENST00000471996 TAX1BP3O14907 124 aa8.48□□□□□ -1.05
SORT1-203ENST00000471996 PRR15Q8IV56 129 aa8.46□□□□□ -1.06
SORT1-203ENST00000471996 KRTAP2-2Q9BYT5 123 aa8.46□□□□□ -1.06
SORT1-203ENST00000471996 KRTAP2-1Q9BYU5 128 aa8.46□□□□□ -1.06
SORT1-203ENST00000471996 SPRR2EP22531 72 aa8.45□□□□□ -1.06
SORT1-203ENST00000471996 SPRR2BP35325 72 aa8.45□□□□□ -1.06
SORT1-203ENST00000471996 SPRR2AP35326 72 aa8.45□□□□□ -1.06
SORT1-203ENST00000471996 Q6ZVQ6 151 aa8.43□□□□□ -1.06
SORT1-203ENST00000471996 TMEM254Q8TBM7 123 aa8.4□□□□□ -1.06
SORT1-203ENST00000471996 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
SORT1-203ENST00000471996 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
SORT1-203ENST00000471996 MMP24-AS1A0A0U1RRL7 71 aa8.36□□□□□ -1.07
SORT1-203ENST00000471996 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
SORT1-203ENST00000471996 SPCS1Q9Y6A9 102 aa8.36□□□□□ -1.07
SORT1-203ENST00000471996 hDV103S1A0JD37 113 aa8.34□□□□□ -1.07
SORT1-203ENST00000471996 BPY2O14599 106 aa8.34□□□□□ -1.07
SORT1-203ENST00000471996 K7EQZ3 153 aa8.33□□□□□ -1.08
SORT1-203ENST00000471996 IMUPQ9GZP8 106 aa8.33□□□□□ -1.08
SORT1-203ENST00000471996 COL5A1-AS1Q5SY13 56 aa8.31□□□□□ -1.08
SORT1-203ENST00000471996 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
SORT1-203ENST00000471996 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
SORT1-203ENST00000471996 NDUFS5O43920 106 aa8.27□□□□□ -1.09
SORT1-203ENST00000471996 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
SORT1-203ENST00000471996 LCE1AQ5T7P2 110 aa8.26□□□□□ -1.09
SORT1-203ENST00000471996 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
SORT1-203ENST00000471996 C4orf26Q17RF5 130 aa8.24□□□□□ -1.09
SORT1-203ENST00000471996 KLKP1Q107X0 134 aa8.23□□□□□ -1.09
SORT1-203ENST00000471996 K7EP34 96 aa8.22□□□□□ -1.09
SORT1-203ENST00000471996 CSAG1Q6PB30 78 aa8.22□□□□□ -1.09
SORT1-203ENST00000471996 UBL5Q9BZL1 73 aa8.22□□□□□ -1.09
SORT1-203ENST00000471996 PRO0461Q9UI25 63 aa8.22□□□□□ -1.09
SORT1-203ENST00000471996 CASC2Q6XLA1 102 aa8.21□□□□□ -1.1
SORT1-203ENST00000471996 GPR98Q8WXG9 6306 aa8.2□□□□□ -1.1
SORT1-203ENST00000471996 SPRR2DP22532 72 aa8.18□□□□□ -1.1
SORT1-203ENST00000471996 Q5W150 140 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms