RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 NOTCH2NLQ7Z3S9 236 aa7.92□□□□□ -1.14
DNMT3A-209ENST00000470983 LCE2CQ5TA81 110 aa7.91□□□□□ -1.14
DNMT3A-209ENST00000470983 IGHV6-1A0A0B4J1U7 121 aa7.9□□□□□ -1.14
DNMT3A-209ENST00000470983 H3BT86 120 aa7.9□□□□□ -1.14
DNMT3A-209ENST00000470983 LINC00313P59037 77 aa7.9□□□□□ -1.14
DNMT3A-209ENST00000470983 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
DNMT3A-209ENST00000470983 SPCS1Q9Y6A9 102 aa7.89□□□□□ -1.15
DNMT3A-209ENST00000470983 PDE6GP18545 87 aa7.88□□□□□ -1.15
DNMT3A-209ENST00000470983 C21orf62-AS1Q17RA5 79 aa7.88□□□□□ -1.15
DNMT3A-209ENST00000470983 MT1HP80294 61 aa7.87□□□□□ -1.15
DNMT3A-209ENST00000470983 A0A1B0GVX0 72 aa7.86□□□□□ -1.15
DNMT3A-209ENST00000470983 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
DNMT3A-209ENST00000470983 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
DNMT3A-209ENST00000470983 J3KT08 172 aa7.84□□□□□ -1.15
DNMT3A-209ENST00000470983 M0R2T5 61 aa7.84□□□□□ -1.15
DNMT3A-209ENST00000470983 A0A1B0GW54 56 aa7.82□□□□□ -1.16
DNMT3A-209ENST00000470983 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
DNMT3A-209ENST00000470983 SMCPP49901 116 aaPredicted RBP7.81□□□□□ -1.16
DNMT3A-209ENST00000470983 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
DNMT3A-209ENST00000470983 COX6B2Q6YFQ2 88 aa7.8□□□□□ -1.16
DNMT3A-209ENST00000470983 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
DNMT3A-209ENST00000470983 K7EP34 96 aa7.78□□□□□ -1.16
DNMT3A-209ENST00000470983 NREPQ16612 68 aa7.78□□□□□ -1.16
DNMT3A-209ENST00000470983 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
DNMT3A-209ENST00000470983 A8MWP4 228 aa7.77□□□□□ -1.17
DNMT3A-209ENST00000470983 NDUFB1O75438 58 aa7.77□□□□□ -1.17
DNMT3A-209ENST00000470983 PRO0461Q9UI25 63 aa7.76□□□□□ -1.17
DNMT3A-209ENST00000470983 C8orf17Q9NRJ1 99 aa7.75□□□□□ -1.17
DNMT3A-209ENST00000470983 PRR15Q8IV56 129 aa7.71□□□□□ -1.18
DNMT3A-209ENST00000470983 K7EQZ3 153 aa7.68□□□□□ -1.18
DNMT3A-209ENST00000470983 Q6ZVQ6 151 aa7.68□□□□□ -1.18
DNMT3A-209ENST00000470983 Q8N9P0 234 aaPredicted RBP7.68□□□□□ -1.18
DNMT3A-209ENST00000470983 ZCCHC13Q8WW36 166 aaKnown RBP7.68□□□□□ -1.18
DNMT3A-209ENST00000470983 MMP24-AS1A0A0U1RRL7 71 aa7.67□□□□□ -1.18
DNMT3A-209ENST00000470983 GTF2H5Q6ZYL4 71 aa7.67□□□□□ -1.18
DNMT3A-209ENST00000470983 BPY2O14599 106 aa7.66□□□□□ -1.18
DNMT3A-209ENST00000470983 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
DNMT3A-209ENST00000470983 HRES1P13985 223 aa7.64□□□□□ -1.19
DNMT3A-209ENST00000470983 Q8N9L7 120 aa7.62□□□□□ -1.19
DNMT3A-209ENST00000470983 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
DNMT3A-209ENST00000470983 LINC00846Q9NV44 126 aa7.62□□□□□ -1.19
DNMT3A-209ENST00000470983 MRPL34Q9BQ48 92 aaKnown RBP7.61□□□□□ -1.19
DNMT3A-209ENST00000470983 hDV103S1A0JD37 113 aa7.6□□□□□ -1.19
DNMT3A-209ENST00000470983 FAM236DA0A1B0GTK5 79 aa7.59□□□□□ -1.19
DNMT3A-209ENST00000470983 F8W1H4 67 aa7.59□□□□□ -1.19
DNMT3A-209ENST00000470983 FAM236CP0DP71 79 aa7.59□□□□□ -1.19
DNMT3A-209ENST00000470983 ETDBQ3ZM63 59 aa7.59□□□□□ -1.19
DNMT3A-209ENST00000470983 MPLKIPQ8TAP9 179 aa7.59□□□□□ -1.19
DNMT3A-209ENST00000470983 SPINK7P58062 85 aa7.58□□□□□ -1.2
DNMT3A-209ENST00000470983 KRTAP9-7A8MTY7 169 aa7.57□□□□□ -1.2
DNMT3A-209ENST00000470983 NDUFS5O43920 106 aa7.57□□□□□ -1.2
DNMT3A-209ENST00000470983 WFDC13Q8IUB5 93 aa7.57□□□□□ -1.2
DNMT3A-209ENST00000470983 UBL5Q9BZL1 73 aa7.57□□□□□ -1.2
DNMT3A-209ENST00000470983 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
DNMT3A-209ENST00000470983 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.53□□□□□ -1.2
DNMT3A-209ENST00000470983 CASC2Q6XLA1 102 aa7.52□□□□□ -1.21
DNMT3A-209ENST00000470983 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
DNMT3A-209ENST00000470983 Q5W150 140 aa7.47□□□□□ -1.21
DNMT3A-209ENST00000470983 A0A1B0GV90 55 aa7.46□□□□□ -1.22
DNMT3A-209ENST00000470983 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
DNMT3A-209ENST00000470983 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
DNMT3A-209ENST00000470983 CXCL6P80162 114 aa7.41□□□□□ -1.22
DNMT3A-209ENST00000470983 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
DNMT3A-209ENST00000470983 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
DNMT3A-209ENST00000470983 ACYP1P07311 99 aa7.35□□□□□ -1.23
DNMT3A-209ENST00000470983 FAM240AA0A1B0GVK7 77 aa7.34□□□□□ -1.23
DNMT3A-209ENST00000470983 MT2AP02795 61 aa7.33□□□□□ -1.24
DNMT3A-209ENST00000470983 MT1FP04733 61 aa7.28□□□□□ -1.24
DNMT3A-209ENST00000470983 C4orf26Q17RF5 130 aa7.28□□□□□ -1.24
DNMT3A-209ENST00000470983 H1FX-AS1Q4G0G2 97 aa7.28□□□□□ -1.24
DNMT3A-209ENST00000470983 ATP5EP2Q5VTU8 51 aa7.27□□□□□ -1.25
DNMT3A-209ENST00000470983 TP53AIP1Q9HCN2 124 aa7.27□□□□□ -1.25
DNMT3A-209ENST00000470983 USH2AO75445 5202 aa7.26□□□□□ -1.25
DNMT3A-209ENST00000470983 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
DNMT3A-209ENST00000470983 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
DNMT3A-209ENST00000470983 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
DNMT3A-209ENST00000470983 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
DNMT3A-209ENST00000470983 LINC00643Q86TS7 51 aa7.21□□□□□ -1.26
DNMT3A-209ENST00000470983 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.26
DNMT3A-209ENST00000470983 A0A087WVE0 104 aa7.2□□□□□ -1.26
DNMT3A-209ENST00000470983 TRAV22A0A0B4J277 110 aa7.17□□□□□ -1.26
DNMT3A-209ENST00000470983 LCE2BO14633 110 aa7.17□□□□□ -1.26
DNMT3A-209ENST00000470983 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
DNMT3A-209ENST00000470983 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
DNMT3A-209ENST00000470983 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.26
DNMT3A-209ENST00000470983 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
DNMT3A-209ENST00000470983 UQCRQO14949 82 aa7.11□□□□□ -1.27
DNMT3A-209ENST00000470983 LOC101927531A0A1B0GV80 90 aa7.1□□□□□ -1.27
DNMT3A-209ENST00000470983 H0Y9P7 68 aa7.1□□□□□ -1.27
DNMT3A-209ENST00000470983 J3QR89 54 aa7.1□□□□□ -1.27
DNMT3A-209ENST00000470983 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
DNMT3A-209ENST00000470983 S4R3F8 94 aa7.08□□□□□ -1.28
DNMT3A-209ENST00000470983 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
DNMT3A-209ENST00000470983 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
DNMT3A-209ENST00000470983 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
DNMT3A-209ENST00000470983 LCA10Q71F78 164 aa7.04□□□□□ -1.28
DNMT3A-209ENST00000470983 K7ERU9 68 aa7.03□□□□□ -1.28
DNMT3A-209ENST00000470983 ATOX1O00244 68 aa7.03□□□□□ -1.28
DNMT3A-209ENST00000470983 OCR1Q9BZK8 76 aa7.02□□□□□ -1.29
DNMT3A-209ENST00000470983 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms