RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 USH2AO75445 5202 aa15.6■□□□□ 0.09
HMG20B-209ENST00000470356 MT2AP02795 61 aa15.58■□□□□ 0.08
HMG20B-209ENST00000470356 BAALC-AS2P0C853 105 aa15.56■□□□□ 0.08
HMG20B-209ENST00000470356 C21orf62-AS1Q17RA5 79 aa15.56■□□□□ 0.08
HMG20B-209ENST00000470356 J3KT08 172 aa15.55■□□□□ 0.08
HMG20B-209ENST00000470356 C9JAW5 83 aa15.54■□□□□ 0.08
HMG20B-209ENST00000470356 Q6ZQT0 140 aa15.5■□□□□ 0.07
HMG20B-209ENST00000470356 SSPOA2VEC9 5147 aa15.5■□□□□ 0.07
HMG20B-209ENST00000470356 ZCCHC13Q8WW36 166 aaKnown RBP15.49■□□□□ 0.07
HMG20B-209ENST00000470356 TMA7Q9Y2S6 64 aaKnown RBP15.47■□□□□ 0.07
HMG20B-209ENST00000470356 MT1FP04733 61 aa15.45■□□□□ 0.06
HMG20B-209ENST00000470356 MTURNQ8N3F0 131 aa15.44■□□□□ 0.06
HMG20B-209ENST00000470356 NDUFB1O75438 58 aa15.41■□□□□ 0.06
HMG20B-209ENST00000470356 SPINK7P58062 85 aa15.41■□□□□ 0.06
HMG20B-209ENST00000470356 Q8N9P0 234 aaPredicted RBP15.39■□□□□ 0.05
HMG20B-209ENST00000470356 KRTAP10-10P60014 251 aa15.38■□□□□ 0.05
HMG20B-209ENST00000470356 KRTAP9-1A8MXZ3 250 aaPredicted RBP15.37■□□□□ 0.05
HMG20B-209ENST00000470356 A0A1B0GW54 56 aa15.36■□□□□ 0.05
HMG20B-209ENST00000470356 JMJD7-PLA2G4BH0Y9G9 81 aa15.36■□□□□ 0.05
HMG20B-209ENST00000470356 KRTAP9-3Q9BYQ3 159 aa15.36■□□□□ 0.05
HMG20B-209ENST00000470356 ATXN8Q156A1 80 aa15.35■□□□□ 0.05
HMG20B-209ENST00000470356 LCE2BO14633 110 aa15.34■□□□□ 0.05
HMG20B-209ENST00000470356 LOC110117498A0A087WWA1 95 aa15.33■□□□□ 0.04
HMG20B-209ENST00000470356 A8MWP4 228 aa15.32■□□□□ 0.04
HMG20B-209ENST00000470356 C8orf17Q9NRJ1 99 aa15.31■□□□□ 0.04
HMG20B-209ENST00000470356 M0R143 59 aa15.3■□□□□ 0.04
HMG20B-209ENST00000470356 PDE6GP18545 87 aa15.29■□□□□ 0.04
HMG20B-209ENST00000470356 NAA38Q9BRA0 125 aaKnown RBP15.29■□□□□ 0.04
HMG20B-209ENST00000470356 IGKV3D-7A0A0C4DH55 119 aa15.26■□□□□ 0.03
HMG20B-209ENST00000470356 KRTAP9-7A8MTY7 169 aa15.25■□□□□ 0.03
HMG20B-209ENST00000470356 LYRM7Q5U5X0 104 aa15.23■□□□□ 0.03
HMG20B-209ENST00000470356 FCGBPQ9Y6R7 5405 aaPredicted RBP15.22■□□□□ 0.03
HMG20B-209ENST00000470356 C14orf132Q9NPU4 83 aa15.2■□□□□ 0.02
HMG20B-209ENST00000470356 Q6ZVQ6 151 aa15.19■□□□□ 0.02
HMG20B-209ENST00000470356 WFDC13Q8IUB5 93 aa15.18■□□□□ 0.02
HMG20B-209ENST00000470356 KRTAP19-1Q8IUB9 90 aa15.18■□□□□ 0.02
HMG20B-209ENST00000470356 PRR15Q8IV56 129 aa15.16■□□□□ 0.02
HMG20B-209ENST00000470356 NREPQ16612 68 aa15.12■□□□□ 0.01
HMG20B-209ENST00000470356 TMEM254Q8TBM7 123 aa15.05■□□□□ -0
HMG20B-209ENST00000470356 MMP24-AS1A0A0U1RRL7 71 aa15.04■□□□□ -0
HMG20B-209ENST00000470356 MRPL34Q9BQ48 92 aaKnown RBP15.04■□□□□ -0
HMG20B-209ENST00000470356 SMIM6P0DI80 62 aa14.99□□□□□ -0.01
HMG20B-209ENST00000470356 hDV103S1A0JD37 113 aa14.95□□□□□ -0.02
HMG20B-209ENST00000470356 K7EQZ3 153 aa14.93□□□□□ -0.02
HMG20B-209ENST00000470356 NDUFS5O43920 106 aa14.9□□□□□ -0.02
HMG20B-209ENST00000470356 BATFQ16520 125 aa14.9□□□□□ -0.02
HMG20B-209ENST00000470356 H1FX-AS1Q4G0G2 97 aa14.9□□□□□ -0.02
HMG20B-209ENST00000470356 H3BT86 120 aa14.88□□□□□ -0.03
HMG20B-209ENST00000470356 LINC00846Q9NV44 126 aa14.88□□□□□ -0.03
HMG20B-209ENST00000470356 TSTD3H0UI37 97 aa14.86□□□□□ -0.03
HMG20B-209ENST00000470356 KRTAP19-6Q3LI70 58 aa14.86□□□□□ -0.03
HMG20B-209ENST00000470356 C9orf118A6NHY6 69 aa14.83□□□□□ -0.04
HMG20B-209ENST00000470356 BPY2O14599 106 aa14.82□□□□□ -0.04
HMG20B-209ENST00000470356 MACF1Q9UPN3 7388 aaKnown RBP14.81□□□□□ -0.04
HMG20B-209ENST00000470356 IGKV2D-30A0A075B6S6 120 aa14.77□□□□□ -0.05
HMG20B-209ENST00000470356 IGKV2-30P06310 120 aa14.77□□□□□ -0.05
HMG20B-209ENST00000470356 A0A1W2PPM0 123 aa14.76□□□□□ -0.05
HMG20B-209ENST00000470356 Q5W150 140 aa14.76□□□□□ -0.05
HMG20B-209ENST00000470356 TAX1BP3O14907 124 aa14.74□□□□□ -0.05
HMG20B-209ENST00000470356 C7orf65Q6ZTY9 151 aa14.74□□□□□ -0.05
HMG20B-209ENST00000470356 SYNE2Q8WXH0 6885 aaKnown RBP14.67□□□□□ -0.06
HMG20B-209ENST00000470356 CASC2Q6XLA1 102 aa14.67□□□□□ -0.06
HMG20B-209ENST00000470356 Q8N9L7 120 aa14.66□□□□□ -0.06
HMG20B-209ENST00000470356 HCG22E2RYF7 251 aa14.62□□□□□ -0.07
HMG20B-209ENST00000470356 CXCL6P80162 114 aa14.56□□□□□ -0.08
HMG20B-209ENST00000470356 C4orf26Q17RF5 130 aa14.55□□□□□ -0.08
HMG20B-209ENST00000470356 SPCS1Q9Y6A9 102 aa14.53□□□□□ -0.08
HMG20B-209ENST00000470356 SMCPP49901 116 aaPredicted RBP14.5□□□□□ -0.09
HMG20B-209ENST00000470356 LOC105371267A0A1B0GV96 52 aa14.45□□□□□ -0.1
HMG20B-209ENST00000470356 UBL5Q9BZL1 73 aa14.42□□□□□ -0.1
HMG20B-209ENST00000470356 C5orf47Q569G3 176 aa14.37□□□□□ -0.11
HMG20B-209ENST00000470356 KRTAP3-1Q9BYR8 98 aa14.35□□□□□ -0.11
HMG20B-209ENST00000470356 PRO0461Q9UI25 63 aa14.34□□□□□ -0.11
HMG20B-209ENST00000470356 KRTAP6-3Q3LI67 103 aa14.31□□□□□ -0.12
HMG20B-209ENST00000470356 S4R3F8 94 aa14.27□□□□□ -0.13
HMG20B-209ENST00000470356 FAM236AA0A1B0GUQ0 79 aa14.26□□□□□ -0.13
HMG20B-209ENST00000470356 FAM236BA0A1B0GV22 79 aa14.26□□□□□ -0.13
HMG20B-209ENST00000470356 COL5A1-AS1Q5SY13 56 aa14.26□□□□□ -0.13
HMG20B-209ENST00000470356 C1orf64Q8NEQ6 169 aa14.26□□□□□ -0.13
HMG20B-209ENST00000470356 CSAG1Q6PB30 78 aa14.24□□□□□ -0.13
HMG20B-209ENST00000470356 K7EP34 96 aa14.23□□□□□ -0.13
HMG20B-209ENST00000470356 TP53AIP1Q9HCN2 124 aa14.2□□□□□ -0.14
HMG20B-209ENST00000470356 LCA10Q71F78 164 aa14.18□□□□□ -0.14
HMG20B-209ENST00000470356 SPRR2GQ9BYE4 73 aa14.12□□□□□ -0.15
HMG20B-209ENST00000470356 MT1BP07438 61 aa14.11□□□□□ -0.15
HMG20B-209ENST00000470356 Q5VV11 94 aa14.09□□□□□ -0.15
HMG20B-209ENST00000470356 KRTAP19-8Q3LI54 63 aa14.07□□□□□ -0.16
HMG20B-209ENST00000470356 A6NN06 94 aa14.06□□□□□ -0.16
HMG20B-209ENST00000470356 GTF2H5Q6ZYL4 71 aa14□□□□□ -0.17
HMG20B-209ENST00000470356 F8W1H4 67 aa13.98□□□□□ -0.17
HMG20B-209ENST00000470356 KLKP1Q107X0 134 aa13.97□□□□□ -0.17
HMG20B-209ENST00000470356 KRTAP3-3Q9BYR6 98 aa13.97□□□□□ -0.17
HMG20B-209ENST00000470356 CYP4F30PQ9H0H9 118 aa13.97□□□□□ -0.17
HMG20B-209ENST00000470356 ETDBQ3ZM63 59 aa13.95□□□□□ -0.18
HMG20B-209ENST00000470356 KRTAP10-5P60370 271 aa13.86□□□□□ -0.19
HMG20B-209ENST00000470356 NEBP20929 6669 aa13.85□□□□□ -0.19
HMG20B-209ENST00000470356 TRAV22A0A0B4J277 110 aa13.84□□□□□ -0.19
HMG20B-209ENST00000470356 LOC101927531A0A1B0GV80 90 aa13.82□□□□□ -0.2
HMG20B-209ENST00000470356 A0A087WVE0 104 aa13.81□□□□□ -0.2
HMG20B-209ENST00000470356 CRIPTQ9P021 101 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms