RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KRTAP9-6A0A140TA67 174 aa8.08□□□□□ -1.12
CDC42SE1-203ENST00000470278 A0A1B0GV90 55 aa8.07□□□□□ -1.12
CDC42SE1-203ENST00000470278 NREPQ16612 68 aa8.07□□□□□ -1.12
CDC42SE1-203ENST00000470278 A0A0U1RQV1 116 aa8.06□□□□□ -1.12
CDC42SE1-203ENST00000470278 RPL37P61927 97 aaKnown RBP8.06□□□□□ -1.12
CDC42SE1-203ENST00000470278 A0A1B0GVX0 72 aa8.05□□□□□ -1.12
CDC42SE1-203ENST00000470278 A8MWP4 228 aa8.03□□□□□ -1.12
CDC42SE1-203ENST00000470278 C8orf87E5RJ46 101 aa8.03□□□□□ -1.12
CDC42SE1-203ENST00000470278 LINC00313P59037 77 aa8.03□□□□□ -1.12
CDC42SE1-203ENST00000470278 Q75L30 129 aa8.03□□□□□ -1.12
CDC42SE1-203ENST00000470278 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
CDC42SE1-203ENST00000470278 DSCR10P59022 87 aa8.02□□□□□ -1.13
CDC42SE1-203ENST00000470278 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
CDC42SE1-203ENST00000470278 NDUFB1O75438 58 aa8.01□□□□□ -1.13
CDC42SE1-203ENST00000470278 Q6ZVQ6 151 aa8.01□□□□□ -1.13
CDC42SE1-203ENST00000470278 KRTAP16-1A8MUX0 517 aa8□□□□□ -1.13
CDC42SE1-203ENST00000470278 LINC00846Q9NV44 126 aa8□□□□□ -1.13
CDC42SE1-203ENST00000470278 A8MUU9 505 aa7.99□□□□□ -1.13
CDC42SE1-203ENST00000470278 NOTCH2NLQ7Z3S9 236 aa7.99□□□□□ -1.13
CDC42SE1-203ENST00000470278 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
CDC42SE1-203ENST00000470278 IGKV3D-7A0A0C4DH55 119 aa7.98□□□□□ -1.13
CDC42SE1-203ENST00000470278 PCOTHQ58A44 107 aa7.98□□□□□ -1.13
CDC42SE1-203ENST00000470278 BPY2O14599 106 aa7.97□□□□□ -1.13
CDC42SE1-203ENST00000470278 PRR15Q8IV56 129 aa7.97□□□□□ -1.13
CDC42SE1-203ENST00000470278 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
CDC42SE1-203ENST00000470278 FAM240AA0A1B0GVK7 77 aa7.94□□□□□ -1.14
CDC42SE1-203ENST00000470278 K7EQZ3 153 aa7.93□□□□□ -1.14
CDC42SE1-203ENST00000470278 ACYP1P07311 99 aa7.93□□□□□ -1.14
CDC42SE1-203ENST00000470278 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
CDC42SE1-203ENST00000470278 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
CDC42SE1-203ENST00000470278 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
CDC42SE1-203ENST00000470278 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
CDC42SE1-203ENST00000470278 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
CDC42SE1-203ENST00000470278 CXCL6P80162 114 aa7.87□□□□□ -1.15
CDC42SE1-203ENST00000470278 LCE2DQ5TA82 110 aaPredicted RBP7.85□□□□□ -1.15
CDC42SE1-203ENST00000470278 Q8N9L7 120 aa7.85□□□□□ -1.15
CDC42SE1-203ENST00000470278 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
CDC42SE1-203ENST00000470278 hDV103S1A0JD37 113 aa7.83□□□□□ -1.16
CDC42SE1-203ENST00000470278 LCE2CQ5TA81 110 aa7.83□□□□□ -1.16
CDC42SE1-203ENST00000470278 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
CDC42SE1-203ENST00000470278 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
CDC42SE1-203ENST00000470278 ATP5EP2Q5VTU8 51 aa7.81□□□□□ -1.16
CDC42SE1-203ENST00000470278 J3QR89 54 aa7.78□□□□□ -1.16
CDC42SE1-203ENST00000470278 CASC2Q6XLA1 102 aa7.78□□□□□ -1.16
CDC42SE1-203ENST00000470278 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-203ENST00000470278 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
CDC42SE1-203ENST00000470278 WFDC13Q8IUB5 93 aa7.75□□□□□ -1.17
CDC42SE1-203ENST00000470278 CRCT1Q9UGL9 99 aa7.75□□□□□ -1.17
CDC42SE1-203ENST00000470278 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
CDC42SE1-203ENST00000470278 NDUFS5O43920 106 aa7.71□□□□□ -1.18
CDC42SE1-203ENST00000470278 MT1HP80294 61 aa7.67□□□□□ -1.18
CDC42SE1-203ENST00000470278 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
CDC42SE1-203ENST00000470278 K7ERU9 68 aa7.64□□□□□ -1.19
CDC42SE1-203ENST00000470278 SPINK7P58062 85 aa7.64□□□□□ -1.19
CDC42SE1-203ENST00000470278 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
CDC42SE1-203ENST00000470278 HRES1P13985 223 aa7.63□□□□□ -1.19
CDC42SE1-203ENST00000470278 MPLKIPQ8TAP9 179 aa7.63□□□□□ -1.19
CDC42SE1-203ENST00000470278 Q5W150 140 aa7.62□□□□□ -1.19
CDC42SE1-203ENST00000470278 TP53AIP1Q9HCN2 124 aa7.62□□□□□ -1.19
CDC42SE1-203ENST00000470278 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
CDC42SE1-203ENST00000470278 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
CDC42SE1-203ENST00000470278 A0A087WVE0 104 aa7.57□□□□□ -1.2
CDC42SE1-203ENST00000470278 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
CDC42SE1-203ENST00000470278 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
CDC42SE1-203ENST00000470278 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
CDC42SE1-203ENST00000470278 IGKV2D-30A0A075B6S6 120 aa7.52□□□□□ -1.21
CDC42SE1-203ENST00000470278 IGKV2-30P06310 120 aa7.52□□□□□ -1.21
CDC42SE1-203ENST00000470278 IMUPQ9GZP8 106 aa7.51□□□□□ -1.21
CDC42SE1-203ENST00000470278 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
CDC42SE1-203ENST00000470278 FAM236DA0A1B0GTK5 79 aa7.49□□□□□ -1.21
CDC42SE1-203ENST00000470278 FAM236CP0DP71 79 aa7.49□□□□□ -1.21
CDC42SE1-203ENST00000470278 UQCRQO14949 82 aa7.48□□□□□ -1.21
CDC42SE1-203ENST00000470278 MT-ATP8P03928 68 aa7.46□□□□□ -1.22
CDC42SE1-203ENST00000470278 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
CDC42SE1-203ENST00000470278 ATOX1O00244 68 aa7.43□□□□□ -1.22
CDC42SE1-203ENST00000470278 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
CDC42SE1-203ENST00000470278 M0R2T5 61 aa7.4□□□□□ -1.22
CDC42SE1-203ENST00000470278 H0Y9P7 68 aa7.39□□□□□ -1.23
CDC42SE1-203ENST00000470278 CYP4F30PQ9H0H9 118 aa7.38□□□□□ -1.23
CDC42SE1-203ENST00000470278 SCGB1A1P11684 91 aa7.37□□□□□ -1.23
CDC42SE1-203ENST00000470278 C4orf26Q17RF5 130 aa7.36□□□□□ -1.23
CDC42SE1-203ENST00000470278 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
CDC42SE1-203ENST00000470278 USH2AO75445 5202 aa7.34□□□□□ -1.23
CDC42SE1-203ENST00000470278 H1FX-AS1Q4G0G2 97 aa7.34□□□□□ -1.23
CDC42SE1-203ENST00000470278 C5orf47Q569G3 176 aa7.34□□□□□ -1.23
CDC42SE1-203ENST00000470278 FAM236AA0A1B0GUQ0 79 aa7.33□□□□□ -1.24
CDC42SE1-203ENST00000470278 FAM236BA0A1B0GV22 79 aa7.33□□□□□ -1.24
CDC42SE1-203ENST00000470278 MP68P56378 58 aa7.33□□□□□ -1.24
CDC42SE1-203ENST00000470278 C1orf64Q8NEQ6 169 aa7.31□□□□□ -1.24
CDC42SE1-203ENST00000470278 H3BPC8 53 aa7.3□□□□□ -1.24
CDC42SE1-203ENST00000470278 SMIM20Q8N5G0 67 aa7.3□□□□□ -1.24
CDC42SE1-203ENST00000470278 LINC00208Q96KT6 92 aa7.29□□□□□ -1.24
CDC42SE1-203ENST00000470278 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
CDC42SE1-203ENST00000470278 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
CDC42SE1-203ENST00000470278 TRAV7A0A075B6U4 112 aa7.25□□□□□ -1.25
CDC42SE1-203ENST00000470278 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
CDC42SE1-203ENST00000470278 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
CDC42SE1-203ENST00000470278 FCGBPQ9Y6R7 5405 aaPredicted RBP7.21□□□□□ -1.25
CDC42SE1-203ENST00000470278 KLKP1Q107X0 134 aa7.21□□□□□ -1.26
CDC42SE1-203ENST00000470278 A8MUN3 132 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms