RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 ATXN8Q156A1 80 aa9.4□□□□□ -0.9
PHGDH-204ENST00000469443 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
PHGDH-204ENST00000469443 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
PHGDH-204ENST00000469443 C21orf62-AS1Q17RA5 79 aa9.38□□□□□ -0.91
PHGDH-204ENST00000469443 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.37□□□□□ -0.91
PHGDH-204ENST00000469443 TRBV20-1A0A075B6N2 111 aa9.36□□□□□ -0.91
PHGDH-204ENST00000469443 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
PHGDH-204ENST00000469443 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
PHGDH-204ENST00000469443 JMJD7-PLA2G4BH0Y9G9 81 aa9.34□□□□□ -0.91
PHGDH-204ENST00000469443 Q6ZQT0 140 aa9.33□□□□□ -0.92
PHGDH-204ENST00000469443 J3KT08 172 aa9.32□□□□□ -0.92
PHGDH-204ENST00000469443 TSTD3H0UI37 97 aa9.31□□□□□ -0.92
PHGDH-204ENST00000469443 LYRM7Q5U5X0 104 aa9.31□□□□□ -0.92
PHGDH-204ENST00000469443 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
PHGDH-204ENST00000469443 A0A1B0GW54 56 aa9.28□□□□□ -0.92
PHGDH-204ENST00000469443 PDE6GP18545 87 aa9.28□□□□□ -0.92
PHGDH-204ENST00000469443 BATFQ16520 125 aa9.27□□□□□ -0.93
PHGDH-204ENST00000469443 FSIP2Q5CZC0 6907 aa9.25□□□□□ -0.93
PHGDH-204ENST00000469443 C14orf132Q9NPU4 83 aa9.25□□□□□ -0.93
PHGDH-204ENST00000469443 CRCT1Q9UGL9 99 aa9.25□□□□□ -0.93
PHGDH-204ENST00000469443 NDUFB1O75438 58 aa9.24□□□□□ -0.93
PHGDH-204ENST00000469443 HRES1P13985 223 aa9.22□□□□□ -0.93
PHGDH-204ENST00000469443 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.94
PHGDH-204ENST00000469443 FAM236CP0DP71 79 aa9.21□□□□□ -0.94
PHGDH-204ENST00000469443 MPLKIPQ8TAP9 179 aa9.21□□□□□ -0.94
PHGDH-204ENST00000469443 LOC105371267A0A1B0GV96 52 aa9.2□□□□□ -0.94
PHGDH-204ENST00000469443 A8MWP4 228 aa9.2□□□□□ -0.94
PHGDH-204ENST00000469443 RBM12B-AS1Q9P1G2 102 aa9.2□□□□□ -0.94
PHGDH-204ENST00000469443 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
PHGDH-204ENST00000469443 C9orf118A6NHY6 69 aa9.18□□□□□ -0.94
PHGDH-204ENST00000469443 Q8N9P0 234 aaPredicted RBP9.18□□□□□ -0.94
PHGDH-204ENST00000469443 C8orf17Q9NRJ1 99 aa9.18□□□□□ -0.94
PHGDH-204ENST00000469443 IGKV3D-7A0A0C4DH55 119 aa9.16□□□□□ -0.94
PHGDH-204ENST00000469443 H3BT86 120 aa9.15□□□□□ -0.94
PHGDH-204ENST00000469443 TAX1BP3O14907 124 aa9.15□□□□□ -0.94
PHGDH-204ENST00000469443 A0A1W2PPM0 123 aa9.14□□□□□ -0.95
PHGDH-204ENST00000469443 NREPQ16612 68 aa9.14□□□□□ -0.95
PHGDH-204ENST00000469443 KRTAP9-8Q9BYQ0 159 aa9.12□□□□□ -0.95
PHGDH-204ENST00000469443 PRR15Q8IV56 129 aa9.11□□□□□ -0.95
PHGDH-204ENST00000469443 MTURNQ8N3F0 131 aa9.11□□□□□ -0.95
PHGDH-204ENST00000469443 SPINK7P58062 85 aa9.1□□□□□ -0.95
PHGDH-204ENST00000469443 Q6ZVQ6 151 aa9.1□□□□□ -0.95
PHGDH-204ENST00000469443 LCE3BQ5TA77 95 aa9.06□□□□□ -0.96
PHGDH-204ENST00000469443 MMP24-AS1A0A0U1RRL7 71 aa9.05□□□□□ -0.96
PHGDH-204ENST00000469443 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
PHGDH-204ENST00000469443 MRPL34Q9BQ48 92 aaKnown RBP9.03□□□□□ -0.96
PHGDH-204ENST00000469443 KRTAP4-12Q9BQ66 201 aa9.03□□□□□ -0.96
PHGDH-204ENST00000469443 K7EQZ3 153 aa9.01□□□□□ -0.97
PHGDH-204ENST00000469443 SPCS1Q9Y6A9 102 aa9.01□□□□□ -0.97
PHGDH-204ENST00000469443 MT2AP02795 61 aa9□□□□□ -0.97
PHGDH-204ENST00000469443 hDV103S1A0JD37 113 aa8.99□□□□□ -0.97
PHGDH-204ENST00000469443 BPY2O14599 106 aa8.98□□□□□ -0.97
PHGDH-204ENST00000469443 WFDC13Q8IUB5 93 aa8.97□□□□□ -0.97
PHGDH-204ENST00000469443 NDUFS5O43920 106 aa8.94□□□□□ -0.98
PHGDH-204ENST00000469443 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
PHGDH-204ENST00000469443 MT1FP04733 61 aa8.92□□□□□ -0.98
PHGDH-204ENST00000469443 KRTAP9-9Q9BYP9 154 aa8.9□□□□□ -0.98
PHGDH-204ENST00000469443 KRTAP9-4Q9BYQ2 154 aa8.9□□□□□ -0.98
PHGDH-204ENST00000469443 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
PHGDH-204ENST00000469443 PRO0461Q9UI25 63 aa8.88□□□□□ -0.99
PHGDH-204ENST00000469443 Q8N9L7 120 aa8.87□□□□□ -0.99
PHGDH-204ENST00000469443 K7EP34 96 aa8.85□□□□□ -0.99
PHGDH-204ENST00000469443 CASC2Q6XLA1 102 aa8.85□□□□□ -0.99
PHGDH-204ENST00000469443 USH2AO75445 5202 aa8.84□□□□□ -0.99
PHGDH-204ENST00000469443 Q5W150 140 aa8.83□□□□□ -1
PHGDH-204ENST00000469443 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
PHGDH-204ENST00000469443 UBL5Q9BZL1 73 aa8.82□□□□□ -1
PHGDH-204ENST00000469443 LINC00846Q9NV44 126 aa8.82□□□□□ -1
PHGDH-204ENST00000469443 IGKV2D-30A0A075B6S6 120 aa8.81□□□□□ -1
PHGDH-204ENST00000469443 HCG22E2RYF7 251 aa8.81□□□□□ -1
PHGDH-204ENST00000469443 IGKV2-30P06310 120 aa8.81□□□□□ -1
PHGDH-204ENST00000469443 KRTAP4-8A0A0G2JLE6 195 aa8.8□□□□□ -1
PHGDH-204ENST00000469443 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
PHGDH-204ENST00000469443 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
PHGDH-204ENST00000469443 KRTAP19-1Q8IUB9 90 aa8.79□□□□□ -1
PHGDH-204ENST00000469443 SSPOA2VEC9 5147 aa8.78□□□□□ -1
PHGDH-204ENST00000469443 CXCL6P80162 114 aa8.75□□□□□ -1.01
PHGDH-204ENST00000469443 GTF2H5Q6ZYL4 71 aa8.75□□□□□ -1.01
PHGDH-204ENST00000469443 F8W1H4 67 aa8.7□□□□□ -1.02
PHGDH-204ENST00000469443 PCP4L1A6NKN8 68 aa8.68□□□□□ -1.02
PHGDH-204ENST00000469443 C4orf26Q17RF5 130 aa8.66□□□□□ -1.02
PHGDH-204ENST00000469443 ETDBQ3ZM63 59 aa8.66□□□□□ -1.02
PHGDH-204ENST00000469443 TP53AIP1Q9HCN2 124 aa8.59□□□□□ -1.03
PHGDH-204ENST00000469443 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-204ENST00000469443 KRTAP9-7A8MTY7 169 aa8.55□□□□□ -1.04
PHGDH-204ENST00000469443 KRTAP4-7Q9BYR0 210 aa8.53□□□□□ -1.04
PHGDH-204ENST00000469443 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
PHGDH-204ENST00000469443 C1orf64Q8NEQ6 169 aa8.5□□□□□ -1.05
PHGDH-204ENST00000469443 KRTAP19-6Q3LI70 58 aa8.49□□□□□ -1.05
PHGDH-204ENST00000469443 LCE1DQ5T752 114 aa8.49□□□□□ -1.05
PHGDH-204ENST00000469443 ACYP1P07311 99 aa8.48□□□□□ -1.05
PHGDH-204ENST00000469443 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
PHGDH-204ENST00000469443 S4R3F8 94 aa8.48□□□□□ -1.05
PHGDH-204ENST00000469443 FAM240AA0A1B0GVK7 77 aa8.43□□□□□ -1.06
PHGDH-204ENST00000469443 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
PHGDH-204ENST00000469443 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
PHGDH-204ENST00000469443 LCA10Q71F78 164 aa8.41□□□□□ -1.06
PHGDH-204ENST00000469443 CYP4F30PQ9H0H9 118 aa8.41□□□□□ -1.06
PHGDH-204ENST00000469443 TRAV22A0A0B4J277 110 aa8.4□□□□□ -1.06
PHGDH-204ENST00000469443 MACF1Q9UPN3 7388 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms