RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 C20orf166-AS1Q96NR2 134 aa11.34□□□□□ -0.59
LIME1-203ENST00000465591 COX6B2Q6YFQ2 88 aa11.33□□□□□ -0.6
LIME1-203ENST00000465591 A8MUU9 505 aa11.32□□□□□ -0.6
LIME1-203ENST00000465591 DSCR10P59022 87 aa11.32□□□□□ -0.6
LIME1-203ENST00000465591 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
LIME1-203ENST00000465591 Q6ZQT0 140 aa11.31□□□□□ -0.6
LIME1-203ENST00000465591 C14orf132Q9NPU4 83 aa11.31□□□□□ -0.6
LIME1-203ENST00000465591 KRTAP10-6P60371 365 aaPredicted RBP11.3□□□□□ -0.6
LIME1-203ENST00000465591 SIGMAR1Q99720 223 aa11.3□□□□□ -0.6
LIME1-203ENST00000465591 A0A1B0GW54 56 aa11.28□□□□□ -0.6
LIME1-203ENST00000465591 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
LIME1-203ENST00000465591 IGKV4-1P06312 121 aa11.25□□□□□ -0.61
LIME1-203ENST00000465591 PRO0461Q9UI25 63 aa11.25□□□□□ -0.61
LIME1-203ENST00000465591 M0R2T5 61 aa11.24□□□□□ -0.61
LIME1-203ENST00000465591 DEFB116Q30KQ4 102 aa11.24□□□□□ -0.61
LIME1-203ENST00000465591 LINC00472Q9H8W2 130 aa11.23□□□□□ -0.61
LIME1-203ENST00000465591 KRTAP16-1A8MUX0 517 aa11.22□□□□□ -0.61
LIME1-203ENST00000465591 F8W1H4 67 aa11.22□□□□□ -0.61
LIME1-203ENST00000465591 NOTCH2NLQ7Z3S9 236 aa11.22□□□□□ -0.61
LIME1-203ENST00000465591 LINC00313P59037 77 aa11.2□□□□□ -0.62
LIME1-203ENST00000465591 FSIP2Q5CZC0 6907 aa11.16□□□□□ -0.62
LIME1-203ENST00000465591 J3KT08 172 aa11.13□□□□□ -0.63
LIME1-203ENST00000465591 IGHV6-1A0A0B4J1U7 121 aa11.11□□□□□ -0.63
LIME1-203ENST00000465591 NREPQ16612 68 aa11.11□□□□□ -0.63
LIME1-203ENST00000465591 CRCT1Q9UGL9 99 aa11.09□□□□□ -0.63
LIME1-203ENST00000465591 ETDBQ3ZM63 59 aa11.07□□□□□ -0.64
LIME1-203ENST00000465591 A0A1B0GVX0 72 aa11.05□□□□□ -0.64
LIME1-203ENST00000465591 A0A1B0GV90 55 aa11.03□□□□□ -0.64
LIME1-203ENST00000465591 NDUFB1O75438 58 aa11.03□□□□□ -0.64
LIME1-203ENST00000465591 C8orf87E5RJ46 101 aa11□□□□□ -0.65
LIME1-203ENST00000465591 A8MWP4 228 aa10.98□□□□□ -0.65
LIME1-203ENST00000465591 HRES1P13985 223 aa10.97□□□□□ -0.65
LIME1-203ENST00000465591 Q6ZVQ6 151 aa10.96□□□□□ -0.65
LIME1-203ENST00000465591 MPLKIPQ8TAP9 179 aa10.96□□□□□ -0.65
LIME1-203ENST00000465591 UBL5Q9BZL1 73 aa10.96□□□□□ -0.65
LIME1-203ENST00000465591 BPY2O14599 106 aa10.94□□□□□ -0.66
LIME1-203ENST00000465591 LINC00846Q9NV44 126 aa10.93□□□□□ -0.66
LIME1-203ENST00000465591 KRTAP9-8Q9BYQ0 159 aa10.92□□□□□ -0.66
LIME1-203ENST00000465591 IGKV3D-7A0A0C4DH55 119 aa10.91□□□□□ -0.66
LIME1-203ENST00000465591 PRR15Q8IV56 129 aa10.9□□□□□ -0.66
LIME1-203ENST00000465591 FAM236DA0A1B0GTK5 79 aa10.89□□□□□ -0.67
LIME1-203ENST00000465591 FAM236CP0DP71 79 aa10.89□□□□□ -0.67
LIME1-203ENST00000465591 ZCCHC13Q8WW36 166 aaKnown RBP10.88□□□□□ -0.67
LIME1-203ENST00000465591 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
LIME1-203ENST00000465591 ACYP1P07311 99 aa10.85□□□□□ -0.67
LIME1-203ENST00000465591 Q8N9P0 234 aaPredicted RBP10.85□□□□□ -0.67
LIME1-203ENST00000465591 RBM12B-AS1Q9P1G2 102 aa10.84□□□□□ -0.67
LIME1-203ENST00000465591 K7EQZ3 153 aa10.82□□□□□ -0.68
LIME1-203ENST00000465591 FAM240AA0A1B0GVK7 77 aa10.8□□□□□ -0.68
LIME1-203ENST00000465591 SPINK7P58062 85 aa10.79□□□□□ -0.68
LIME1-203ENST00000465591 MMP24-AS1A0A0U1RRL7 71 aa10.76□□□□□ -0.69
LIME1-203ENST00000465591 MT2AP02795 61 aa10.76□□□□□ -0.69
LIME1-203ENST00000465591 TMEM254Q8TBM7 123 aa10.75□□□□□ -0.69
LIME1-203ENST00000465591 Q8N9L7 120 aa10.74□□□□□ -0.69
LIME1-203ENST00000465591 hDV103S1A0JD37 113 aa10.73□□□□□ -0.69
LIME1-203ENST00000465591 CXCL6P80162 114 aa10.73□□□□□ -0.69
LIME1-203ENST00000465591 MRPL34Q9BQ48 92 aaKnown RBP10.72□□□□□ -0.69
LIME1-203ENST00000465591 USH2AO75445 5202 aa10.7□□□□□ -0.7
LIME1-203ENST00000465591 J3QR89 54 aa10.69□□□□□ -0.7
LIME1-203ENST00000465591 MT1FP04733 61 aa10.69□□□□□ -0.7
LIME1-203ENST00000465591 CASC2Q6XLA1 102 aa10.67□□□□□ -0.7
LIME1-203ENST00000465591 WFDC13Q8IUB5 93 aa10.66□□□□□ -0.7
LIME1-203ENST00000465591 NDUFS5O43920 106 aa10.64□□□□□ -0.71
LIME1-203ENST00000465591 ATP5EP2Q5VTU8 51 aa10.64□□□□□ -0.71
LIME1-203ENST00000465591 SSPOA2VEC9 5147 aa10.63□□□□□ -0.71
LIME1-203ENST00000465591 HCG22E2RYF7 251 aa10.62□□□□□ -0.71
LIME1-203ENST00000465591 LINC00643Q86TS7 51 aa10.59□□□□□ -0.71
LIME1-203ENST00000465591 KRTAP9-3Q9BYQ3 159 aa10.58□□□□□ -0.72
LIME1-203ENST00000465591 KRTAP10-10P60014 251 aa10.57□□□□□ -0.72
LIME1-203ENST00000465591 LCE2BO14633 110 aa10.55□□□□□ -0.72
LIME1-203ENST00000465591 HIST1H4AP62805 103 aaKnown RBP10.51□□□□□ -0.73
LIME1-203ENST00000465591 Q5W150 140 aa10.5□□□□□ -0.73
LIME1-203ENST00000465591 K7ERU9 68 aa10.47□□□□□ -0.73
LIME1-203ENST00000465591 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
LIME1-203ENST00000465591 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
LIME1-203ENST00000465591 IGKV2-30P06310 120 aa10.43□□□□□ -0.74
LIME1-203ENST00000465591 H1FX-AS1Q4G0G2 97 aa10.39□□□□□ -0.75
LIME1-203ENST00000465591 C7orf65Q6ZTY9 151 aa10.38□□□□□ -0.75
LIME1-203ENST00000465591 KRTAP19-1Q8IUB9 90 aa10.36□□□□□ -0.75
LIME1-203ENST00000465591 FCGBPQ9Y6R7 5405 aaPredicted RBP10.35□□□□□ -0.75
LIME1-203ENST00000465591 A0A087WVE0 104 aa10.35□□□□□ -0.75
LIME1-203ENST00000465591 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.35□□□□□ -0.75
LIME1-203ENST00000465591 C4orf26Q17RF5 130 aa10.27□□□□□ -0.77
LIME1-203ENST00000465591 UQCRQO14949 82 aa10.25□□□□□ -0.77
LIME1-203ENST00000465591 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
LIME1-203ENST00000465591 TRAV22A0A0B4J277 110 aa10.23□□□□□ -0.77
LIME1-203ENST00000465591 KRTAP9-7A8MTY7 169 aa10.21□□□□□ -0.77
LIME1-203ENST00000465591 MT-ATP8P03928 68 aa10.19□□□□□ -0.78
LIME1-203ENST00000465591 ATOX1O00244 68 aa10.17□□□□□ -0.78
LIME1-203ENST00000465591 SCGB1A1P11684 91 aa10.17□□□□□ -0.78
LIME1-203ENST00000465591 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
LIME1-203ENST00000465591 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
LIME1-203ENST00000465591 H0Y9P7 68 aa10.15□□□□□ -0.78
LIME1-203ENST00000465591 KRTAP19-6Q3LI70 58 aa10.14□□□□□ -0.79
LIME1-203ENST00000465591 OCR1Q9BZK8 76 aa10.14□□□□□ -0.79
LIME1-203ENST00000465591 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
LIME1-203ENST00000465591 MP68P56378 58 aa10.09□□□□□ -0.79
LIME1-203ENST00000465591 C5orf47Q569G3 176 aa10.07□□□□□ -0.8
LIME1-203ENST00000465591 C1orf64Q8NEQ6 169 aa10.05□□□□□ -0.8
LIME1-203ENST00000465591 LINC00208Q96KT6 92 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms