RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
USP39-211ENST00000465282 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
USP39-211ENST00000465282 DSCR10P59022 87 aa9.1□□□□□ -0.95
USP39-211ENST00000465282 IGHV6-1A0A0B4J1U7 121 aa9.09□□□□□ -0.95
USP39-211ENST00000465282 ETDBQ3ZM63 59 aa9.09□□□□□ -0.95
USP39-211ENST00000465282 PCOTHQ58A44 107 aa9.09□□□□□ -0.95
USP39-211ENST00000465282 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
USP39-211ENST00000465282 A8MWP4 228 aa9.08□□□□□ -0.96
USP39-211ENST00000465282 MUC2Q02817 5179 aa9.07□□□□□ -0.96
USP39-211ENST00000465282 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
USP39-211ENST00000465282 A8MUU9 505 aa9.06□□□□□ -0.96
USP39-211ENST00000465282 ATP11AUNQ6ZP68 121 aa9.05□□□□□ -0.96
USP39-211ENST00000465282 KRTAP16-1A8MUX0 517 aa9.03□□□□□ -0.96
USP39-211ENST00000465282 Q6ZVQ6 151 aa9.03□□□□□ -0.96
USP39-211ENST00000465282 NOTCH2NLQ7Z3S9 236 aa9.03□□□□□ -0.96
USP39-211ENST00000465282 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
USP39-211ENST00000465282 BPY2O14599 106 aa9.02□□□□□ -0.97
USP39-211ENST00000465282 UBL5Q9BZL1 73 aa9.02□□□□□ -0.97
USP39-211ENST00000465282 PRR15Q8IV56 129 aa9.01□□□□□ -0.97
USP39-211ENST00000465282 A0A1B0GV90 55 aa9□□□□□ -0.97
USP39-211ENST00000465282 LINC00846Q9NV44 126 aa9□□□□□ -0.97
USP39-211ENST00000465282 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
USP39-211ENST00000465282 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
USP39-211ENST00000465282 ACYP1P07311 99 aa8.94□□□□□ -0.98
USP39-211ENST00000465282 K7EQZ3 153 aa8.93□□□□□ -0.98
USP39-211ENST00000465282 Q8N9P0 234 aaPredicted RBP8.92□□□□□ -0.98
USP39-211ENST00000465282 FAM240AA0A1B0GVK7 77 aa8.9□□□□□ -0.98
USP39-211ENST00000465282 MMP24-AS1A0A0U1RRL7 71 aa8.89□□□□□ -0.99
USP39-211ENST00000465282 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
USP39-211ENST00000465282 hDV103S1A0JD37 113 aa8.87□□□□□ -0.99
USP39-211ENST00000465282 CXCL6P80162 114 aa8.87□□□□□ -0.99
USP39-211ENST00000465282 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
USP39-211ENST00000465282 KRTAP9-2Q9BYQ4 174 aa8.86□□□□□ -0.99
USP39-211ENST00000465282 Q8N9L7 120 aa8.83□□□□□ -1
USP39-211ENST00000465282 ZCCHC13Q8WW36 166 aaKnown RBP8.83□□□□□ -1
USP39-211ENST00000465282 FAT4Q6V0I7 4981 aa8.81□□□□□ -1
USP39-211ENST00000465282 CASC2Q6XLA1 102 aa8.8□□□□□ -1
USP39-211ENST00000465282 HCG22E2RYF7 251 aa8.77□□□□□ -1.01
USP39-211ENST00000465282 J3QR89 54 aa8.77□□□□□ -1.01
USP39-211ENST00000465282 ATP5EP2Q5VTU8 51 aa8.77□□□□□ -1.01
USP39-211ENST00000465282 WFDC13Q8IUB5 93 aa8.76□□□□□ -1.01
USP39-211ENST00000465282 NDUFS5O43920 106 aa8.75□□□□□ -1.01
USP39-211ENST00000465282 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
USP39-211ENST00000465282 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
USP39-211ENST00000465282 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
USP39-211ENST00000465282 KRTAP9-6A0A140TA67 174 aa8.72□□□□□ -1.01
USP39-211ENST00000465282 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
USP39-211ENST00000465282 LINC00643Q86TS7 51 aa8.71□□□□□ -1.02
USP39-211ENST00000465282 COX6B2Q6YFQ2 88 aa8.7□□□□□ -1.02
USP39-211ENST00000465282 SPINK7P58062 85 aa8.68□□□□□ -1.02
USP39-211ENST00000465282 RBM12B-AS1Q9P1G2 102 aa8.65□□□□□ -1.02
USP39-211ENST00000465282 HRES1P13985 223 aa8.64□□□□□ -1.03
USP39-211ENST00000465282 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
USP39-211ENST00000465282 MPLKIPQ8TAP9 179 aa8.63□□□□□ -1.03
USP39-211ENST00000465282 HIST1H4AP62805 103 aaKnown RBP8.62□□□□□ -1.03
USP39-211ENST00000465282 Q5W150 140 aa8.61□□□□□ -1.03
USP39-211ENST00000465282 MT1HP80294 61 aa8.6□□□□□ -1.03
USP39-211ENST00000465282 K7ERU9 68 aa8.57□□□□□ -1.04
USP39-211ENST00000465282 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
USP39-211ENST00000465282 FAM236DA0A1B0GTK5 79 aa8.56□□□□□ -1.04
USP39-211ENST00000465282 FAM236CP0DP71 79 aa8.56□□□□□ -1.04
USP39-211ENST00000465282 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
USP39-211ENST00000465282 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
USP39-211ENST00000465282 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
USP39-211ENST00000465282 M0R2T5 61 aa8.5□□□□□ -1.05
USP39-211ENST00000465282 A0A087WVE0 104 aa8.49□□□□□ -1.05
USP39-211ENST00000465282 UQCRQO14949 82 aa8.46□□□□□ -1.06
USP39-211ENST00000465282 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
USP39-211ENST00000465282 IMUPQ9GZP8 106 aa8.44□□□□□ -1.06
USP39-211ENST00000465282 ATOX1O00244 68 aa8.4□□□□□ -1.06
USP39-211ENST00000465282 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
USP39-211ENST00000465282 LOC101927531A0A1B0GV80 90 aa8.38□□□□□ -1.07
USP39-211ENST00000465282 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
USP39-211ENST00000465282 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
USP39-211ENST00000465282 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
USP39-211ENST00000465282 OCR1Q9BZK8 76 aa8.36□□□□□ -1.07
USP39-211ENST00000465282 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
USP39-211ENST00000465282 H0Y9P7 68 aa8.35□□□□□ -1.07
USP39-211ENST00000465282 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
USP39-211ENST00000465282 MT-ATP8P03928 68 aa8.33□□□□□ -1.08
USP39-211ENST00000465282 SCGB1A1P11684 91 aa8.33□□□□□ -1.08
USP39-211ENST00000465282 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
USP39-211ENST00000465282 MP68P56378 58 aa8.3□□□□□ -1.08
USP39-211ENST00000465282 CRCT1Q9UGL9 99 aa8.29□□□□□ -1.08
USP39-211ENST00000465282 C1orf64Q8NEQ6 169 aa8.27□□□□□ -1.09
USP39-211ENST00000465282 H3BPC8 53 aa8.25□□□□□ -1.09
USP39-211ENST00000465282 LINC00208Q96KT6 92 aa8.25□□□□□ -1.09
USP39-211ENST00000465282 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
USP39-211ENST00000465282 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
USP39-211ENST00000465282 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
USP39-211ENST00000465282 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
USP39-211ENST00000465282 FAM236AA0A1B0GUQ0 79 aa8.2□□□□□ -1.1
USP39-211ENST00000465282 FAM236BA0A1B0GV22 79 aa8.2□□□□□ -1.1
USP39-211ENST00000465282 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
USP39-211ENST00000465282 TRAV7A0A075B6U4 112 aa8.17□□□□□ -1.1
USP39-211ENST00000465282 S4R3F8 94 aa8.13□□□□□ -1.11
USP39-211ENST00000465282 KLKP1Q107X0 134 aa8.12□□□□□ -1.11
USP39-211ENST00000465282 A8MUN3 132 aa8.11□□□□□ -1.11
USP39-211ENST00000465282 MT2AP02795 61 aa8.1□□□□□ -1.11
USP39-211ENST00000465282 CSAG1Q6PB30 78 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms