RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 UQCR10Q9UDW1 63 aa7.18□□□□□ -1.26
SNRNP40-203ENST00000463988 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
SNRNP40-203ENST00000463988 C21orf62-AS1Q17RA5 79 aa7.17□□□□□ -1.26
SNRNP40-203ENST00000463988 A0A1B0GVX0 72 aa7.16□□□□□ -1.26
SNRNP40-203ENST00000463988 DSCR8Q96T75 97 aa7.16□□□□□ -1.26
SNRNP40-203ENST00000463988 MT2AP02795 61 aa7.15□□□□□ -1.26
SNRNP40-203ENST00000463988 SCGB1C2P0DMR2 95 aa7.15□□□□□ -1.26
SNRNP40-203ENST00000463988 VPS25Q9BRG1 176 aa7.15□□□□□ -1.26
SNRNP40-203ENST00000463988 J3KT08 172 aa7.14□□□□□ -1.27
SNRNP40-203ENST00000463988 C9JAW5 83 aa7.11□□□□□ -1.27
SNRNP40-203ENST00000463988 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
SNRNP40-203ENST00000463988 Q6ZQT0 140 aa7.1□□□□□ -1.27
SNRNP40-203ENST00000463988 MTURNQ8N3F0 131 aa7.1□□□□□ -1.27
SNRNP40-203ENST00000463988 ZCCHC13Q8WW36 166 aaKnown RBP7.1□□□□□ -1.27
SNRNP40-203ENST00000463988 MT1FP04733 61 aa7.09□□□□□ -1.27
SNRNP40-203ENST00000463988 A0A1B0GW54 56 aa7.07□□□□□ -1.28
SNRNP40-203ENST00000463988 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.07□□□□□ -1.28
SNRNP40-203ENST00000463988 NDUFB1O75438 58 aa7.07□□□□□ -1.28
SNRNP40-203ENST00000463988 SPINK7P58062 85 aa7.06□□□□□ -1.28
SNRNP40-203ENST00000463988 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
SNRNP40-203ENST00000463988 Q8N9P0 234 aaPredicted RBP7.06□□□□□ -1.28
SNRNP40-203ENST00000463988 KRTAP9-3Q9BYQ3 159 aa7.06□□□□□ -1.28
SNRNP40-203ENST00000463988 JMJD7-PLA2G4BH0Y9G9 81 aa7.04□□□□□ -1.28
SNRNP40-203ENST00000463988 LOC110117498A0A087WWA1 95 aa7.02□□□□□ -1.29
SNRNP40-203ENST00000463988 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
SNRNP40-203ENST00000463988 A8MWP4 228 aa7.02□□□□□ -1.29
SNRNP40-203ENST00000463988 PDE6GP18545 87 aa7.02□□□□□ -1.29
SNRNP40-203ENST00000463988 ATXN8Q156A1 80 aa7.02□□□□□ -1.29
SNRNP40-203ENST00000463988 C8orf17Q9NRJ1 99 aa7.01□□□□□ -1.29
SNRNP40-203ENST00000463988 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-203ENST00000463988 M0R143 59 aa7□□□□□ -1.29
SNRNP40-203ENST00000463988 FCGBPQ9Y6R7 5405 aaPredicted RBP7□□□□□ -1.29
SNRNP40-203ENST00000463988 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
SNRNP40-203ENST00000463988 LYRM7Q5U5X0 104 aa6.96□□□□□ -1.3
SNRNP40-203ENST00000463988 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
SNRNP40-203ENST00000463988 Q6ZVQ6 151 aa6.95□□□□□ -1.3
SNRNP40-203ENST00000463988 WFDC13Q8IUB5 93 aa6.95□□□□□ -1.3
SNRNP40-203ENST00000463988 PRR15Q8IV56 129 aa6.95□□□□□ -1.3
SNRNP40-203ENST00000463988 NAA38Q9BRA0 125 aaKnown RBP6.94□□□□□ -1.3
SNRNP40-203ENST00000463988 C14orf132Q9NPU4 83 aa6.93□□□□□ -1.3
SNRNP40-203ENST00000463988 NREPQ16612 68 aa6.92□□□□□ -1.3
SNRNP40-203ENST00000463988 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
SNRNP40-203ENST00000463988 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
SNRNP40-203ENST00000463988 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
SNRNP40-203ENST00000463988 LINC00846Q9NV44 126 aa6.88□□□□□ -1.31
SNRNP40-203ENST00000463988 hDV103S1A0JD37 113 aa6.85□□□□□ -1.31
SNRNP40-203ENST00000463988 SMIM6P0DI80 62 aa6.84□□□□□ -1.31
SNRNP40-203ENST00000463988 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
SNRNP40-203ENST00000463988 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
SNRNP40-203ENST00000463988 K7EQZ3 153 aa6.82□□□□□ -1.32
SNRNP40-203ENST00000463988 H3BT86 120 aa6.81□□□□□ -1.32
SNRNP40-203ENST00000463988 NDUFS5O43920 106 aa6.8□□□□□ -1.32
SNRNP40-203ENST00000463988 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
SNRNP40-203ENST00000463988 TSTD3H0UI37 97 aa6.78□□□□□ -1.32
SNRNP40-203ENST00000463988 BPY2O14599 106 aa6.78□□□□□ -1.32
SNRNP40-203ENST00000463988 C9orf118A6NHY6 69 aa6.77□□□□□ -1.33
SNRNP40-203ENST00000463988 BATFQ16520 125 aa6.77□□□□□ -1.33
SNRNP40-203ENST00000463988 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
SNRNP40-203ENST00000463988 SYNE2Q8WXH0 6885 aaKnown RBP6.75□□□□□ -1.33
SNRNP40-203ENST00000463988 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
SNRNP40-203ENST00000463988 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
SNRNP40-203ENST00000463988 Q5W150 140 aa6.75□□□□□ -1.33
SNRNP40-203ENST00000463988 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
SNRNP40-203ENST00000463988 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
SNRNP40-203ENST00000463988 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
SNRNP40-203ENST00000463988 HCG22E2RYF7 251 aa6.68□□□□□ -1.34
SNRNP40-203ENST00000463988 CXCL6P80162 114 aa6.68□□□□□ -1.34
SNRNP40-203ENST00000463988 Q8N9L7 120 aa6.68□□□□□ -1.34
SNRNP40-203ENST00000463988 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
SNRNP40-203ENST00000463988 SPCS1Q9Y6A9 102 aa6.62□□□□□ -1.35
SNRNP40-203ENST00000463988 H3BS24 57 aa6.61□□□□□ -1.35
SNRNP40-203ENST00000463988 KRTAP6-3Q3LI67 103 aa6.6□□□□□ -1.35
SNRNP40-203ENST00000463988 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
SNRNP40-203ENST00000463988 C5orf47Q569G3 176 aa6.57□□□□□ -1.36
SNRNP40-203ENST00000463988 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
SNRNP40-203ENST00000463988 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
SNRNP40-203ENST00000463988 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
SNRNP40-203ENST00000463988 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
SNRNP40-203ENST00000463988 PRO0461Q9UI25 63 aa6.55□□□□□ -1.36
SNRNP40-203ENST00000463988 S4R3F8 94 aa6.54□□□□□ -1.36
SNRNP40-203ENST00000463988 FAM236AA0A1B0GUQ0 79 aa6.53□□□□□ -1.36
SNRNP40-203ENST00000463988 FAM236BA0A1B0GV22 79 aa6.53□□□□□ -1.36
SNRNP40-203ENST00000463988 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SNRNP40-203ENST00000463988 C1orf64Q8NEQ6 169 aa6.53□□□□□ -1.36
SNRNP40-203ENST00000463988 TP53AIP1Q9HCN2 124 aa6.52□□□□□ -1.37
SNRNP40-203ENST00000463988 COL5A1-AS1Q5SY13 56 aa6.51□□□□□ -1.37
SNRNP40-203ENST00000463988 K7EP34 96 aa6.49□□□□□ -1.37
SNRNP40-203ENST00000463988 LCA10Q71F78 164 aa6.49□□□□□ -1.37
SNRNP40-203ENST00000463988 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
SNRNP40-203ENST00000463988 MT1BP07438 61 aa6.47□□□□□ -1.37
SNRNP40-203ENST00000463988 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
SNRNP40-203ENST00000463988 Q5VV11 94 aa6.47□□□□□ -1.37
SNRNP40-203ENST00000463988 A6NN06 94 aa6.46□□□□□ -1.38
SNRNP40-203ENST00000463988 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
SNRNP40-203ENST00000463988 GTF2H5Q6ZYL4 71 aa6.4□□□□□ -1.38
SNRNP40-203ENST00000463988 CYP4F30PQ9H0H9 118 aa6.4□□□□□ -1.38
SNRNP40-203ENST00000463988 F8W1H4 67 aa6.39□□□□□ -1.39
SNRNP40-203ENST00000463988 KRTAP10-5P60370 271 aa6.37□□□□□ -1.39
SNRNP40-203ENST00000463988 NEBP20929 6669 aa6.36□□□□□ -1.39
SNRNP40-203ENST00000463988 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms