RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 F8WEM9 126 aa8.65□□□□□ -1.02
SND1-203ENST00000463020 SPINK1P00995 79 aa8.65□□□□□ -1.02
SND1-203ENST00000463020 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
SND1-203ENST00000463020 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
SND1-203ENST00000463020 MOBPQ13875 183 aa8.63□□□□□ -1.03
SND1-203ENST00000463020 ST20-AS1Q8NBB2 130 aa8.63□□□□□ -1.03
SND1-203ENST00000463020 ZNF706Q9Y5V0 76 aaPredicted RBP8.63□□□□□ -1.03
SND1-203ENST00000463020 ERC2-IT1O76042 136 aa8.62□□□□□ -1.03
SND1-203ENST00000463020 A0A087WVE0 104 aa8.61□□□□□ -1.03
SND1-203ENST00000463020 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
SND1-203ENST00000463020 UQCRQO14949 82 aa8.61□□□□□ -1.03
SND1-203ENST00000463020 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
SND1-203ENST00000463020 NREPQ16612 68 aa8.61□□□□□ -1.03
SND1-203ENST00000463020 FLGP20930 4061 aaPredicted RBP8.6□□□□□ -1.03
SND1-203ENST00000463020 COX7CP15954 63 aa8.59□□□□□ -1.03
SND1-203ENST00000463020 KRTAP10-6P60371 365 aaPredicted RBP8.58□□□□□ -1.04
SND1-203ENST00000463020 C9orf153Q5TBE3 101 aa8.57□□□□□ -1.04
SND1-203ENST00000463020 SERP2Q8N6R1 65 aa8.57□□□□□ -1.04
SND1-203ENST00000463020 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
SND1-203ENST00000463020 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
SND1-203ENST00000463020 SMIM20Q8N5G0 67 aa8.55□□□□□ -1.04
SND1-203ENST00000463020 BPY2O14599 106 aa8.54□□□□□ -1.04
SND1-203ENST00000463020 SMIM29Q86T20 159 aa8.54□□□□□ -1.04
SND1-203ENST00000463020 A0A1W2PNM2 257 aa8.53□□□□□ -1.04
SND1-203ENST00000463020 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
SND1-203ENST00000463020 SPRR1BP22528 89 aa8.52□□□□□ -1.05
SND1-203ENST00000463020 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
SND1-203ENST00000463020 TRAV7A0A075B6U4 112 aa8.48□□□□□ -1.05
SND1-203ENST00000463020 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
SND1-203ENST00000463020 IGFL1Q6UW32 110 aa8.47□□□□□ -1.05
SND1-203ENST00000463020 IGKV4-1P06312 121 aa8.45□□□□□ -1.06
SND1-203ENST00000463020 SS18L2Q9UHA2 77 aa8.45□□□□□ -1.06
SND1-203ENST00000463020 HRCT1Q6UXD1 115 aa8.42□□□□□ -1.06
SND1-203ENST00000463020 SSPOA2VEC9 5147 aa8.4□□□□□ -1.06
SND1-203ENST00000463020 Q8N9L7 120 aa8.39□□□□□ -1.07
SND1-203ENST00000463020 M0R2T5 61 aa8.38□□□□□ -1.07
SND1-203ENST00000463020 USH2AO75445 5202 aa8.38□□□□□ -1.07
SND1-203ENST00000463020 A0A087WSZ3 146 aa8.37□□□□□ -1.07
SND1-203ENST00000463020 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
SND1-203ENST00000463020 KRTAP9-7A8MTY7 169 aa8.36□□□□□ -1.07
SND1-203ENST00000463020 TMEM258P61165 79 aa8.36□□□□□ -1.07
SND1-203ENST00000463020 A0A0G2JQZ4 141 aa8.35□□□□□ -1.07
SND1-203ENST00000463020 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
SND1-203ENST00000463020 DSCR10P59022 87 aa8.34□□□□□ -1.07
SND1-203ENST00000463020 J3KT08 172 aa8.31□□□□□ -1.08
SND1-203ENST00000463020 NDUFC1O43677 76 aa8.3□□□□□ -1.08
SND1-203ENST00000463020 LIMD2Q9BT23 127 aa8.3□□□□□ -1.08
SND1-203ENST00000463020 HCG22E2RYF7 251 aa8.29□□□□□ -1.08
SND1-203ENST00000463020 K7EQZ3 153 aa8.29□□□□□ -1.08
SND1-203ENST00000463020 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
SND1-203ENST00000463020 COX6B2Q6YFQ2 88 aa8.29□□□□□ -1.08
SND1-203ENST00000463020 OCR1Q9BZK8 76 aa8.29□□□□□ -1.08
SND1-203ENST00000463020 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
SND1-203ENST00000463020 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
SND1-203ENST00000463020 DEFB116Q30KQ4 102 aa8.25□□□□□ -1.09
SND1-203ENST00000463020 C1orf195Q5TG92 126 aa8.25□□□□□ -1.09
SND1-203ENST00000463020 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
SND1-203ENST00000463020 A8MWP4 228 aa8.24□□□□□ -1.09
SND1-203ENST00000463020 NDUFB1O75438 58 aa8.24□□□□□ -1.09
SND1-203ENST00000463020 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
SND1-203ENST00000463020 SNURFQ9Y675 71 aa8.23□□□□□ -1.09
SND1-203ENST00000463020 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
SND1-203ENST00000463020 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
SND1-203ENST00000463020 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
SND1-203ENST00000463020 FAM236DA0A1B0GTK5 79 aa8.21□□□□□ -1.1
SND1-203ENST00000463020 FAM236CP0DP71 79 aa8.21□□□□□ -1.1
SND1-203ENST00000463020 H7BZZ5 65 aa8.2□□□□□ -1.1
SND1-203ENST00000463020 ATP5EP56381 51 aaPredicted RBP8.19□□□□□ -1.1
SND1-203ENST00000463020 C5orf47Q569G3 176 aa8.19□□□□□ -1.1
SND1-203ENST00000463020 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
SND1-203ENST00000463020 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
SND1-203ENST00000463020 CD164Q04900 197 aa8.18□□□□□ -1.1
SND1-203ENST00000463020 Q5XG85 94 aa8.17□□□□□ -1.1
SND1-203ENST00000463020 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
SND1-203ENST00000463020 MP68P56378 58 aa8.14□□□□□ -1.11
SND1-203ENST00000463020 Q96NJ1 140 aa8.12□□□□□ -1.11
SND1-203ENST00000463020 SERP1Q9Y6X1 66 aa8.11□□□□□ -1.11
SND1-203ENST00000463020 MMP24-AS1A0A0U1RRL7 71 aa8.1□□□□□ -1.11
SND1-203ENST00000463020 H3BPC8 53 aa8.1□□□□□ -1.11
SND1-203ENST00000463020 A0A1B0GVX0 72 aa8.09□□□□□ -1.11
SND1-203ENST00000463020 hDV103S1A0JD37 113 aa8.09□□□□□ -1.11
SND1-203ENST00000463020 C8orf17Q9NRJ1 99 aa8.08□□□□□ -1.12
SND1-203ENST00000463020 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
SND1-203ENST00000463020 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
SND1-203ENST00000463020 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
SND1-203ENST00000463020 MACF1Q9UPN3 7388 aaKnown RBP8.05□□□□□ -1.12
SND1-203ENST00000463020 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
SND1-203ENST00000463020 H0Y9P7 68 aa8.05□□□□□ -1.12
SND1-203ENST00000463020 KRTAP19-1Q8IUB9 90 aa8.04□□□□□ -1.12
SND1-203ENST00000463020 LCE2BO14633 110 aa8.03□□□□□ -1.12
SND1-203ENST00000463020 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
SND1-203ENST00000463020 MT2AP02795 61 aa8.01□□□□□ -1.13
SND1-203ENST00000463020 C8orf87E5RJ46 101 aa8□□□□□ -1.13
SND1-203ENST00000463020 TRAV22A0A0B4J277 110 aa7.99□□□□□ -1.13
SND1-203ENST00000463020 Q75L30 129 aa7.99□□□□□ -1.13
SND1-203ENST00000463020 MRPL34Q9BQ48 92 aaKnown RBP7.99□□□□□ -1.13
SND1-203ENST00000463020 NDUFS5O43920 106 aa7.98□□□□□ -1.13
SND1-203ENST00000463020 MT1FP04733 61 aa7.97□□□□□ -1.13
SND1-203ENST00000463020 ATP11AUNQ6ZP68 121 aa7.97□□□□□ -1.13
SND1-203ENST00000463020 C1orf64Q8NEQ6 169 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms