RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SS18L2Q9UHA2 77 aa6.42□□□□□ -1.38
IFT88-204ENST00000461115 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
IFT88-204ENST00000461115 ANAPC11Q9NYG5 84 aa6.42□□□□□ -1.38
IFT88-204ENST00000461115 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
IFT88-204ENST00000461115 A8MWP4 228 aa6.4□□□□□ -1.39
IFT88-204ENST00000461115 PRR15Q8IV56 129 aa6.4□□□□□ -1.39
IFT88-204ENST00000461115 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
IFT88-204ENST00000461115 Q5XG85 94 aa6.39□□□□□ -1.39
IFT88-204ENST00000461115 KRTAP29-1A8MX34 341 aaPredicted RBP6.38□□□□□ -1.39
IFT88-204ENST00000461115 KRTAP13-2Q52LG2 175 aa6.38□□□□□ -1.39
IFT88-204ENST00000461115 KMT2CQ8NEZ4 4911 aaKnown RBP6.37□□□□□ -1.39
IFT88-204ENST00000461115 HCG22E2RYF7 251 aa6.37□□□□□ -1.39
IFT88-204ENST00000461115 A0A087X002 238 aa6.36□□□□□ -1.39
IFT88-204ENST00000461115 KLKP1Q107X0 134 aa6.36□□□□□ -1.39
IFT88-204ENST00000461115 SPINK6Q6UWN8 80 aa6.36□□□□□ -1.39
IFT88-204ENST00000461115 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
IFT88-204ENST00000461115 KRTAP10-4P60372 401 aaPredicted RBP6.35□□□□□ -1.39
IFT88-204ENST00000461115 DEFB116Q30KQ4 102 aa6.35□□□□□ -1.39
IFT88-204ENST00000461115 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
IFT88-204ENST00000461115 NDUFB1O75438 58 aa6.32□□□□□ -1.4
IFT88-204ENST00000461115 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
IFT88-204ENST00000461115 CYSTM1Q9H1C7 97 aa6.32□□□□□ -1.4
IFT88-204ENST00000461115 HRCT1Q6UXD1 115 aa6.31□□□□□ -1.4
IFT88-204ENST00000461115 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
IFT88-204ENST00000461115 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
IFT88-204ENST00000461115 A0A0U1RQV1 116 aa6.29□□□□□ -1.4
IFT88-204ENST00000461115 A0A1B0GVX0 72 aa6.29□□□□□ -1.4
IFT88-204ENST00000461115 CASC2Q6XLA1 102 aa6.29□□□□□ -1.4
IFT88-204ENST00000461115 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
IFT88-204ENST00000461115 TMEM258P61165 79 aa6.28□□□□□ -1.4
IFT88-204ENST00000461115 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
IFT88-204ENST00000461115 NDUFC1O43677 76 aa6.27□□□□□ -1.41
IFT88-204ENST00000461115 RPS29P62273 56 aaKnown RBP6.27□□□□□ -1.41
IFT88-204ENST00000461115 C5orf47Q569G3 176 aa6.27□□□□□ -1.41
IFT88-204ENST00000461115 H7BZZ5 65 aa6.26□□□□□ -1.41
IFT88-204ENST00000461115 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
IFT88-204ENST00000461115 C8orf17Q9NRJ1 99 aa6.26□□□□□ -1.41
IFT88-204ENST00000461115 ZCCHC13Q8WW36 166 aaKnown RBP6.25□□□□□ -1.41
IFT88-204ENST00000461115 hDV103S1A0JD37 113 aa6.25□□□□□ -1.41
IFT88-204ENST00000461115 SPINK1P00995 79 aa6.25□□□□□ -1.41
IFT88-204ENST00000461115 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
IFT88-204ENST00000461115 C1orf195Q5TG92 126 aa6.24□□□□□ -1.41
IFT88-204ENST00000461115 LIMD2Q9BT23 127 aa6.24□□□□□ -1.41
IFT88-204ENST00000461115 FAT1Q14517 4588 aa6.23□□□□□ -1.41
IFT88-204ENST00000461115 CDK2AP2O75956 126 aa6.23□□□□□ -1.41
IFT88-204ENST00000461115 TYMSOSQ8TAI1 123 aa6.23□□□□□ -1.41
IFT88-204ENST00000461115 C8orf87E5RJ46 101 aa6.22□□□□□ -1.41
IFT88-204ENST00000461115 H3BPC8 53 aa6.22□□□□□ -1.41
IFT88-204ENST00000461115 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
IFT88-204ENST00000461115 TP53AIP1Q9HCN2 124 aa6.22□□□□□ -1.41
IFT88-204ENST00000461115 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
IFT88-204ENST00000461115 RYR3Q15413 4870 aa6.21□□□□□ -1.41
IFT88-204ENST00000461115 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
IFT88-204ENST00000461115 RPS28P62857 69 aaKnown RBP6.19□□□□□ -1.42
IFT88-204ENST00000461115 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
IFT88-204ENST00000461115 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
IFT88-204ENST00000461115 RYR1P21817 5038 aa6.19□□□□□ -1.42
IFT88-204ENST00000461115 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
IFT88-204ENST00000461115 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
IFT88-204ENST00000461115 HSPG2P98160 4391 aa6.17□□□□□ -1.42
IFT88-204ENST00000461115 MP68P56378 58 aa6.16□□□□□ -1.42
IFT88-204ENST00000461115 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
IFT88-204ENST00000461115 Q8N1X5 172 aa6.16□□□□□ -1.42
IFT88-204ENST00000461115 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.43
IFT88-204ENST00000461115 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.43
IFT88-204ENST00000461115 FAM236CP0DP71 79 aa6.15□□□□□ -1.43
IFT88-204ENST00000461115 H0Y9P7 68 aa6.14□□□□□ -1.43
IFT88-204ENST00000461115 KRTAP13-3Q3SY46 172 aa6.14□□□□□ -1.43
IFT88-204ENST00000461115 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
IFT88-204ENST00000461115 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
IFT88-204ENST00000461115 LINC00313P59037 77 aa6.13□□□□□ -1.43
IFT88-204ENST00000461115 LINC00208Q96KT6 92 aa6.1□□□□□ -1.43
IFT88-204ENST00000461115 FLG2Q5D862 2391 aaPredicted RBP6.1□□□□□ -1.43
IFT88-204ENST00000461115 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
IFT88-204ENST00000461115 TNXBP22105 4242 aa6.09□□□□□ -1.43
IFT88-204ENST00000461115 Q5VSD8 79 aa6.08□□□□□ -1.44
IFT88-204ENST00000461115 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
IFT88-204ENST00000461115 C1orf64Q8NEQ6 169 aa6.08□□□□□ -1.44
IFT88-204ENST00000461115 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
IFT88-204ENST00000461115 SERP1Q9Y6X1 66 aa6.08□□□□□ -1.44
IFT88-204ENST00000461115 NDUFS5O43920 106 aa6.05□□□□□ -1.44
IFT88-204ENST00000461115 Q5W150 140 aa6.05□□□□□ -1.44
IFT88-204ENST00000461115 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
IFT88-204ENST00000461115 LOC101927531A0A1B0GV80 90 aa6.04□□□□□ -1.44
IFT88-204ENST00000461115 OXTP01178 125 aa6.04□□□□□ -1.44
IFT88-204ENST00000461115 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
IFT88-204ENST00000461115 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
IFT88-204ENST00000461115 EPPK1P58107 5090 aaKnown RBP6□□□□□ -1.45
IFT88-204ENST00000461115 LRP1Q07954 4544 aaKnown RBP5.99□□□□□ -1.45
IFT88-204ENST00000461115 A8MUU9 505 aa5.97□□□□□ -1.45
IFT88-204ENST00000461115 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
IFT88-204ENST00000461115 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
IFT88-204ENST00000461115 MT1HL1P0DM35 61 aa5.96□□□□□ -1.46
IFT88-204ENST00000461115 FP248Q71RG6 208 aaPredicted RBP5.95□□□□□ -1.46
IFT88-204ENST00000461115 DMBT1Q9UGM3 2413 aaPredicted RBP5.94□□□□□ -1.46
IFT88-204ENST00000461115 SMIM26A0A096LP01 95 aa5.94□□□□□ -1.46
IFT88-204ENST00000461115 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
IFT88-204ENST00000461115 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
IFT88-204ENST00000461115 Q75L30 129 aa5.9□□□□□ -1.47
IFT88-204ENST00000461115 PRR4Q16378 134 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms