RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PRR4Q16378 134 aa6.44□□□□□ -1.38
HERC4-207ENST00000460168 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.44□□□□□ -1.38
HERC4-207ENST00000460168 DHRS4-AS1Q9P1J3 65 aa6.44□□□□□ -1.38
HERC4-207ENST00000460168 SACSQ9NZJ4 4579 aa6.42□□□□□ -1.38
HERC4-207ENST00000460168 SPINK7P58062 85 aa6.42□□□□□ -1.38
HERC4-207ENST00000460168 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
HERC4-207ENST00000460168 PRLHP81277 87 aa6.41□□□□□ -1.38
HERC4-207ENST00000460168 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
HERC4-207ENST00000460168 CSAG1Q6PB30 78 aa6.4□□□□□ -1.39
HERC4-207ENST00000460168 SMIM29Q86T20 159 aa6.4□□□□□ -1.39
HERC4-207ENST00000460168 DEFB105AQ8NG35 78 aa6.39□□□□□ -1.39
HERC4-207ENST00000460168 Q8N9L7 120 aa6.37□□□□□ -1.39
HERC4-207ENST00000460168 PKD1P98161 4303 aa6.37□□□□□ -1.39
HERC4-207ENST00000460168 DNAH11Q96DT5 4516 aa6.37□□□□□ -1.39
HERC4-207ENST00000460168 KRTAP10-1P60331 282 aa6.36□□□□□ -1.39
HERC4-207ENST00000460168 ST20-AS1Q8NBB2 130 aa6.36□□□□□ -1.39
HERC4-207ENST00000460168 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
HERC4-207ENST00000460168 CDK2AP2O75956 126 aa6.35□□□□□ -1.39
HERC4-207ENST00000460168 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
HERC4-207ENST00000460168 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
HERC4-207ENST00000460168 Q8N377 158 aa6.34□□□□□ -1.39
HERC4-207ENST00000460168 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
HERC4-207ENST00000460168 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
HERC4-207ENST00000460168 Q6ZSA8 131 aa6.34□□□□□ -1.39
HERC4-207ENST00000460168 COA5Q86WW8 74 aa6.34□□□□□ -1.39
HERC4-207ENST00000460168 IGLV5-48A0A075B6I7 105 aa6.33□□□□□ -1.4
HERC4-207ENST00000460168 C1orf137Q5JT78 98 aa6.33□□□□□ -1.4
HERC4-207ENST00000460168 KMT2CQ8NEZ4 4911 aaKnown RBP6.33□□□□□ -1.4
HERC4-207ENST00000460168 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
HERC4-207ENST00000460168 SPAG11AQ6PDA7 123 aa6.32□□□□□ -1.4
HERC4-207ENST00000460168 H3BPC8 53 aa6.31□□□□□ -1.4
HERC4-207ENST00000460168 SRRM2Q9UQ35 2752 aaKnown RBP6.31□□□□□ -1.4
HERC4-207ENST00000460168 KRTAP13-1Q8IUC0 172 aa6.31□□□□□ -1.4
HERC4-207ENST00000460168 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
HERC4-207ENST00000460168 MIR22HGQ0VDD5 57 aa6.3□□□□□ -1.4
HERC4-207ENST00000460168 H0Y9P7 68 aa6.29□□□□□ -1.4
HERC4-207ENST00000460168 A0A1B0GVY2 172 aa6.28□□□□□ -1.4
HERC4-207ENST00000460168 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
HERC4-207ENST00000460168 ZNF861PO60384 105 aa6.27□□□□□ -1.4
HERC4-207ENST00000460168 RYR2Q92736 4967 aa6.27□□□□□ -1.41
HERC4-207ENST00000460168 P0C880 135 aa6.27□□□□□ -1.41
HERC4-207ENST00000460168 IGLV7-43P04211 117 aa6.26□□□□□ -1.41
HERC4-207ENST00000460168 SPRR1BP22528 89 aa6.23□□□□□ -1.41
HERC4-207ENST00000460168 IGLV7-46A0A075B6I9 117 aa6.23□□□□□ -1.41
HERC4-207ENST00000460168 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
HERC4-207ENST00000460168 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
HERC4-207ENST00000460168 SPATA8Q6RVD6 105 aa6.22□□□□□ -1.41
HERC4-207ENST00000460168 LRP1BQ9NZR2 4599 aa6.21□□□□□ -1.42
HERC4-207ENST00000460168 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
HERC4-207ENST00000460168 IGFL1Q6UW32 110 aa6.19□□□□□ -1.42
HERC4-207ENST00000460168 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
HERC4-207ENST00000460168 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
HERC4-207ENST00000460168 Q8NBF4 154 aa6.18□□□□□ -1.42
HERC4-207ENST00000460168 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
HERC4-207ENST00000460168 ANAPC11Q9NYG5 84 aa6.18□□□□□ -1.42
HERC4-207ENST00000460168 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
HERC4-207ENST00000460168 RPL37AP61513 92 aaKnown RBP6.16□□□□□ -1.42
HERC4-207ENST00000460168 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
HERC4-207ENST00000460168 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
HERC4-207ENST00000460168 RYR3Q15413 4870 aa6.16□□□□□ -1.42
HERC4-207ENST00000460168 A0A087WSZ3 146 aa6.13□□□□□ -1.43
HERC4-207ENST00000460168 DSCR10P59022 87 aa6.12□□□□□ -1.43
HERC4-207ENST00000460168 A8MWP4 228 aa6.11□□□□□ -1.43
HERC4-207ENST00000460168 C20orf166-AS1Q96NR2 134 aa6.11□□□□□ -1.43
HERC4-207ENST00000460168 APOBP04114 4563 aaKnown RBP6.1□□□□□ -1.43
HERC4-207ENST00000460168 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
HERC4-207ENST00000460168 SPINK6Q6UWN8 80 aa6.09□□□□□ -1.43
HERC4-207ENST00000460168 LUZP6Q538Z0 58 aa6.09□□□□□ -1.44
HERC4-207ENST00000460168 K7EQZ3 153 aa6.08□□□□□ -1.44
HERC4-207ENST00000460168 KRTAP1-4P0C5Y4 121 aa6.07□□□□□ -1.44
HERC4-207ENST00000460168 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
HERC4-207ENST00000460168 FAT1Q14517 4588 aa6.05□□□□□ -1.44
HERC4-207ENST00000460168 UQCR11O14957 56 aa6.05□□□□□ -1.44
HERC4-207ENST00000460168 KRTAP13-2Q52LG2 175 aa6.05□□□□□ -1.44
HERC4-207ENST00000460168 KRTAP10-4P60372 401 aaPredicted RBP6.04□□□□□ -1.44
HERC4-207ENST00000460168 HRES1P13985 223 aa6.03□□□□□ -1.44
HERC4-207ENST00000460168 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
HERC4-207ENST00000460168 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
HERC4-207ENST00000460168 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
HERC4-207ENST00000460168 K7ERS5 55 aa6.02□□□□□ -1.45
HERC4-207ENST00000460168 A8MUU9 505 aa6.02□□□□□ -1.45
HERC4-207ENST00000460168 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
HERC4-207ENST00000460168 Q5VSD8 79 aa6□□□□□ -1.45
HERC4-207ENST00000460168 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
HERC4-207ENST00000460168 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
HERC4-207ENST00000460168 HSPG2P98160 4391 aa5.98□□□□□ -1.45
HERC4-207ENST00000460168 Q96NJ1 140 aa5.96□□□□□ -1.46
HERC4-207ENST00000460168 WFDC13Q8IUB5 93 aa5.95□□□□□ -1.46
HERC4-207ENST00000460168 EPPK1P58107 5090 aaKnown RBP5.94□□□□□ -1.46
HERC4-207ENST00000460168 A0A1B0GU69 56 aa5.94□□□□□ -1.46
HERC4-207ENST00000460168 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
HERC4-207ENST00000460168 SPINK1P00995 79 aa5.93□□□□□ -1.46
HERC4-207ENST00000460168 Q5W150 140 aa5.91□□□□□ -1.46
HERC4-207ENST00000460168 KIAA1109Q2LD37 5005 aa5.91□□□□□ -1.46
HERC4-207ENST00000460168 Q8N1X5 172 aa5.91□□□□□ -1.46
HERC4-207ENST00000460168 RYR1P21817 5038 aa5.9□□□□□ -1.46
HERC4-207ENST00000460168 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
HERC4-207ENST00000460168 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
HERC4-207ENST00000460168 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
HERC4-207ENST00000460168 XP32Q5T750 250 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms