RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	KRTAP19-2	Q3LHN2	52 aa		5.43	□□□□□ -1.54
MRPL55-223	ENST00000459783		Q75L30	129 aa		5.43	□□□□□ -1.54
MRPL55-223	ENST00000459783	C20orf166-AS1	Q96NR2	134 aa		5.43	□□□□□ -1.54
MRPL55-223	ENST00000459783		A8MUU9	505 aa		5.42	□□□□□ -1.54
MRPL55-223	ENST00000459783		A0A1B0GW54	56 aa		5.41	□□□□□ -1.54
MRPL55-223	ENST00000459783	LCE2A	Q5TA79	106 aa	Predicted RBP	5.41	□□□□□ -1.54
MRPL55-223	ENST00000459783	IGHV6-1	A0A0B4J1U7	121 aa		5.4	□□□□□ -1.54
MRPL55-223	ENST00000459783		A0A1B0GVX0	72 aa		5.4	□□□□□ -1.54
MRPL55-223	ENST00000459783	LCE2C	Q5TA81	110 aa		5.4	□□□□□ -1.54
MRPL55-223	ENST00000459783	LINC00313	P59037	77 aa		5.39	□□□□□ -1.55
MRPL55-223	ENST00000459783	C21orf62-AS1	Q17RA5	79 aa		5.39	□□□□□ -1.55
MRPL55-223	ENST00000459783	IGKV3D-7	A0A0C4DH55	119 aa		5.37	□□□□□ -1.55
MRPL55-223	ENST00000459783		J3KT08	172 aa		5.37	□□□□□ -1.55
MRPL55-223	ENST00000459783	CRCT1	Q9UGL9	99 aa		5.37	□□□□□ -1.55
MRPL55-223	ENST00000459783	GTF2H5	Q6ZYL4	71 aa		5.36	□□□□□ -1.55
MRPL55-223	ENST00000459783		A0A0U1RQV1	116 aa		5.35	□□□□□ -1.55
MRPL55-223	ENST00000459783		A8MWP4	228 aa		5.35	□□□□□ -1.55
MRPL55-223	ENST00000459783	C8orf87	E5RJ46	101 aa		5.35	□□□□□ -1.55
MRPL55-223	ENST00000459783	NREP	Q16612	68 aa		5.35	□□□□□ -1.55
MRPL55-223	ENST00000459783	ATP11AUN	Q6ZP68	121 aa		5.34	□□□□□ -1.55
MRPL55-223	ENST00000459783	ETDB	Q3ZM63	59 aa		5.33	□□□□□ -1.56
MRPL55-223	ENST00000459783		Q6ZVQ6	151 aa		5.33	□□□□□ -1.56
MRPL55-223	ENST00000459783	C8orf17	Q9NRJ1	99 aa		5.33	□□□□□ -1.56
MRPL55-223	ENST00000459783		F8W1H4	67 aa		5.32	□□□□□ -1.56
MRPL55-223	ENST00000459783	PRR15	Q8IV56	129 aa		5.32	□□□□□ -1.56
MRPL55-223	ENST00000459783	LINC00846	Q9NV44	126 aa		5.32	□□□□□ -1.56
MRPL55-223	ENST00000459783		K7EQZ3	153 aa		5.31	□□□□□ -1.56
MRPL55-223	ENST00000459783	MMP24-AS1	A0A0U1RRL7	71 aa		5.3	□□□□□ -1.56
MRPL55-223	ENST00000459783	NDUFB1	O75438	58 aa		5.3	□□□□□ -1.56
MRPL55-223	ENST00000459783		A0A1B0GV90	55 aa		5.29	□□□□□ -1.56
MRPL55-223	ENST00000459783		Q8N9L7	120 aa		5.29	□□□□□ -1.56
MRPL55-223	ENST00000459783		Q8N9P0	234 aa	Predicted RBP	5.29	□□□□□ -1.56
MRPL55-223	ENST00000459783	MT1H	P80294	61 aa		5.28	□□□□□ -1.56
MRPL55-223	ENST00000459783	BPY2	O14599	106 aa		5.27	□□□□□ -1.57
MRPL55-223	ENST00000459783	ZCCHC13	Q8WW36	166 aa	Known RBP	5.25	□□□□□ -1.57
MRPL55-223	ENST00000459783	TMEM254	Q8TBM7	123 aa		5.24	□□□□□ -1.57
MRPL55-223	ENST00000459783	HRES1	P13985	223 aa		5.23	□□□□□ -1.57
MRPL55-223	ENST00000459783	MRPL34	Q9BQ48	92 aa	Known RBP	5.23	□□□□□ -1.57
MRPL55-223	ENST00000459783	UBL5	Q9BZL1	73 aa		5.23	□□□□□ -1.57
MRPL55-223	ENST00000459783	hDV103S1	A0JD37	113 aa		5.22	□□□□□ -1.57
MRPL55-223	ENST00000459783	LCE2D	Q5TA82	110 aa	Predicted RBP	5.22	□□□□□ -1.57
MRPL55-223	ENST00000459783	MPLKIP	Q8TAP9	179 aa		5.22	□□□□□ -1.57
MRPL55-223	ENST00000459783	WFDC13	Q8IUB5	93 aa		5.21	□□□□□ -1.58
MRPL55-223	ENST00000459783	COX6B2	Q6YFQ2	88 aa		5.2	□□□□□ -1.58
MRPL55-223	ENST00000459783		Q5W150	140 aa		5.18	□□□□□ -1.58
MRPL55-223	ENST00000459783	CASC2	Q6XLA1	102 aa		5.18	□□□□□ -1.58
MRPL55-223	ENST00000459783	SPINK7	P58062	85 aa		5.17	□□□□□ -1.58
MRPL55-223	ENST00000459783	FAM240A	A0A1B0GVK7	77 aa		5.16	□□□□□ -1.58
MRPL55-223	ENST00000459783	FLG	P20930	4061 aa	Predicted RBP	5.15	□□□□□ -1.58
MRPL55-223	ENST00000459783	LOR	P23490	312 aa	Predicted RBP	5.15	□□□□□ -1.59
MRPL55-223	ENST00000459783	CXCL6	P80162	114 aa		5.15	□□□□□ -1.59
MRPL55-223	ENST00000459783	KRTAP9-7	A8MTY7	169 aa		5.14	□□□□□ -1.59
MRPL55-223	ENST00000459783	HCG22	E2RYF7	251 aa		5.14	□□□□□ -1.59
MRPL55-223	ENST00000459783	NDUFS5	O43920	106 aa		5.14	□□□□□ -1.59
MRPL55-223	ENST00000459783	KRTAP10-6	P60371	365 aa	Predicted RBP	5.14	□□□□□ -1.59
MRPL55-223	ENST00000459783	ACYP1	P07311	99 aa		5.13	□□□□□ -1.59
MRPL55-223	ENST00000459783		M0R2T5	61 aa		5.09	□□□□□ -1.59
MRPL55-223	ENST00000459783	FAM236D	A0A1B0GTK5	79 aa		5.08	□□□□□ -1.6
MRPL55-223	ENST00000459783	FAM236C	P0DP71	79 aa		5.08	□□□□□ -1.6
MRPL55-223	ENST00000459783	RBM12B-AS1	Q9P1G2	102 aa		5.08	□□□□□ -1.6
MRPL55-223	ENST00000459783	IGKV2D-30	A0A075B6S6	120 aa		5.06	□□□□□ -1.6
MRPL55-223	ENST00000459783	IGKV2-30	P06310	120 aa		5.06	□□□□□ -1.6
MRPL55-223	ENST00000459783	ATP5EP2	Q5VTU8	51 aa		5.06	□□□□□ -1.6
MRPL55-223	ENST00000459783	LINC00643	Q86TS7	51 aa		5.05	□□□□□ -1.6
MRPL55-223	ENST00000459783		A0A087WVE0	104 aa		5.04	□□□□□ -1.6
MRPL55-223	ENST00000459783	C7orf65	Q6ZTY9	151 aa		5.04	□□□□□ -1.6
MRPL55-223	ENST00000459783	KRTAP9-8	Q9BYQ0	159 aa		5.04	□□□□□ -1.6
MRPL55-223	ENST00000459783	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.03	□□□□□ -1.6
MRPL55-223	ENST00000459783	HIST1H4A	P62805	103 aa	Known RBP	5.02	□□□□□ -1.61
MRPL55-223	ENST00000459783	TP53AIP1	Q9HCN2	124 aa		5	□□□□□ -1.61
MRPL55-223	ENST00000459783	C4orf26	Q17RF5	130 aa		4.99	□□□□□ -1.61
MRPL55-223	ENST00000459783	MT2A	P02795	61 aa		4.98	□□□□□ -1.61
MRPL55-223	ENST00000459783	KRTAP3-1	Q9BYR8	98 aa		4.98	□□□□□ -1.61
MRPL55-223	ENST00000459783		J3QR89	54 aa		4.96	□□□□□ -1.62
MRPL55-223	ENST00000459783	H1FX-AS1	Q4G0G2	97 aa		4.96	□□□□□ -1.62
MRPL55-223	ENST00000459783	MT1F	P04733	61 aa		4.95	□□□□□ -1.62
MRPL55-223	ENST00000459783	TRAV22	A0A0B4J277	110 aa		4.94	□□□□□ -1.62
MRPL55-223	ENST00000459783	CYP4F30P	Q9H0H9	118 aa		4.93	□□□□□ -1.62
MRPL55-223	ENST00000459783	UQCRQ	O14949	82 aa		4.92	□□□□□ -1.62
MRPL55-223	ENST00000459783	OCR1	Q9BZK8	76 aa		4.92	□□□□□ -1.62
MRPL55-223	ENST00000459783		H0Y9P7	68 aa		4.9	□□□□□ -1.63
MRPL55-223	ENST00000459783	MT-ATP8	P03928	68 aa		4.9	□□□□□ -1.63
MRPL55-223	ENST00000459783	LOC101927531	A0A1B0GV80	90 aa		4.89	□□□□□ -1.63
MRPL55-223	ENST00000459783	C1orf64	Q8NEQ6	169 aa		4.89	□□□□□ -1.63
MRPL55-223	ENST00000459783		K7ERU9	68 aa		4.88	□□□□□ -1.63
MRPL55-223	ENST00000459783	KRTAP9-3	Q9BYQ3	159 aa		4.87	□□□□□ -1.63
MRPL55-223	ENST00000459783	KRTAP10-10	P60014	251 aa		4.86	□□□□□ -1.63
MRPL55-223	ENST00000459783	ATOX1	O00244	68 aa		4.84	□□□□□ -1.63
MRPL55-223	ENST00000459783	LINC00208	Q96KT6	92 aa		4.84	□□□□□ -1.63
MRPL55-223	ENST00000459783	SYNE2	Q8WXH0	6885 aa	Known RBP	4.84	□□□□□ -1.64
MRPL55-223	ENST00000459783	SSPO	A2VEC9	5147 aa		4.84	□□□□□ -1.64
MRPL55-223	ENST00000459783	LCE2B	O14633	110 aa		4.83	□□□□□ -1.64
MRPL55-223	ENST00000459783	KLKP1	Q107X0	134 aa		4.83	□□□□□ -1.64
MRPL55-223	ENST00000459783	IMUP	Q9GZP8	106 aa		4.83	□□□□□ -1.64
MRPL55-223	ENST00000459783	USH2A	O75445	5202 aa		4.82	□□□□□ -1.64
MRPL55-223	ENST00000459783	LCA10	Q71F78	164 aa		4.82	□□□□□ -1.64
MRPL55-223	ENST00000459783	KRTAP3-3	Q9BYR6	98 aa		4.82	□□□□□ -1.64
MRPL55-223	ENST00000459783	C5orf47	Q569G3	176 aa		4.81	□□□□□ -1.64
MRPL55-223	ENST00000459783		S4R3F8	94 aa		4.81	□□□□□ -1.64
MRPL55-223	ENST00000459783	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.79	□□□□□ -1.64

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