RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
CHCHD3-204ENST00000457942 C9orf118A6NHY6 69 aa8.07□□□□□ -1.12
CHCHD3-204ENST00000457942 LINC00313P59037 77 aa8.07□□□□□ -1.12
CHCHD3-204ENST00000457942 C9JAW5 83 aa8.06□□□□□ -1.12
CHCHD3-204ENST00000457942 MTURNQ8N3F0 131 aa8.06□□□□□ -1.12
CHCHD3-204ENST00000457942 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
CHCHD3-204ENST00000457942 FAM236DA0A1B0GTK5 79 aa8.04□□□□□ -1.12
CHCHD3-204ENST00000457942 FAM236CP0DP71 79 aa8.04□□□□□ -1.12
CHCHD3-204ENST00000457942 DEFB116Q30KQ4 102 aa8.04□□□□□ -1.12
CHCHD3-204ENST00000457942 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
CHCHD3-204ENST00000457942 IGHV6-1A0A0B4J1U7 121 aa8□□□□□ -1.13
CHCHD3-204ENST00000457942 KRTAP9-8Q9BYQ0 159 aa8□□□□□ -1.13
CHCHD3-204ENST00000457942 C14orf132Q9NPU4 83 aa8□□□□□ -1.13
CHCHD3-204ENST00000457942 PCP4L1A6NKN8 68 aa7.99□□□□□ -1.13
CHCHD3-204ENST00000457942 KRTAP19-1Q8IUB9 90 aa7.99□□□□□ -1.13
CHCHD3-204ENST00000457942 KRTAP16-1A8MUX0 517 aa7.98□□□□□ -1.13
CHCHD3-204ENST00000457942 JMJD7-PLA2G4BH0Y9G9 81 aa7.97□□□□□ -1.13
CHCHD3-204ENST00000457942 Q6ZQT0 140 aa7.97□□□□□ -1.13
CHCHD3-204ENST00000457942 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
CHCHD3-204ENST00000457942 LINC00472Q9H8W2 130 aa7.97□□□□□ -1.13
CHCHD3-204ENST00000457942 MACF1Q9UPN3 7388 aaKnown RBP7.97□□□□□ -1.13
CHCHD3-204ENST00000457942 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.13
CHCHD3-204ENST00000457942 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
CHCHD3-204ENST00000457942 SPCS1Q9Y6A9 102 aa7.95□□□□□ -1.14
CHCHD3-204ENST00000457942 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
CHCHD3-204ENST00000457942 LOC110117498A0A087WWA1 95 aa7.93□□□□□ -1.14
CHCHD3-204ENST00000457942 H3BT86 120 aa7.92□□□□□ -1.14
CHCHD3-204ENST00000457942 A0A1B0GVX0 72 aa7.91□□□□□ -1.14
CHCHD3-204ENST00000457942 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
CHCHD3-204ENST00000457942 LCE2BO14633 110 aa7.89□□□□□ -1.15
CHCHD3-204ENST00000457942 HRES1P13985 223 aa7.89□□□□□ -1.15
CHCHD3-204ENST00000457942 MT2AP02795 61 aa7.88□□□□□ -1.15
CHCHD3-204ENST00000457942 PDE6GP18545 87 aa7.87□□□□□ -1.15
CHCHD3-204ENST00000457942 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
CHCHD3-204ENST00000457942 C21orf62-AS1Q17RA5 79 aa7.86□□□□□ -1.15
CHCHD3-204ENST00000457942 J3KT08 172 aa7.85□□□□□ -1.15
CHCHD3-204ENST00000457942 K7EP34 96 aa7.84□□□□□ -1.15
CHCHD3-204ENST00000457942 MPLKIPQ8TAP9 179 aa7.84□□□□□ -1.15
CHCHD3-204ENST00000457942 NDUFB1O75438 58 aa7.83□□□□□ -1.16
CHCHD3-204ENST00000457942 MT1FP04733 61 aa7.83□□□□□ -1.16
CHCHD3-204ENST00000457942 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
CHCHD3-204ENST00000457942 NREPQ16612 68 aa7.8□□□□□ -1.16
CHCHD3-204ENST00000457942 PRO0461Q9UI25 63 aa7.8□□□□□ -1.16
CHCHD3-204ENST00000457942 A0A1B0GW54 56 aa7.79□□□□□ -1.16
CHCHD3-204ENST00000457942 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
CHCHD3-204ENST00000457942 A8MWP4 228 aa7.77□□□□□ -1.17
CHCHD3-204ENST00000457942 SPINK7P58062 85 aa7.77□□□□□ -1.17
CHCHD3-204ENST00000457942 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
CHCHD3-204ENST00000457942 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
CHCHD3-204ENST00000457942 C8orf17Q9NRJ1 99 aa7.76□□□□□ -1.17
CHCHD3-204ENST00000457942 GTF2H5Q6ZYL4 71 aa7.74□□□□□ -1.17
CHCHD3-204ENST00000457942 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
CHCHD3-204ENST00000457942 K7EQZ3 153 aa7.71□□□□□ -1.18
CHCHD3-204ENST00000457942 Q6ZVQ6 151 aa7.71□□□□□ -1.18
CHCHD3-204ENST00000457942 WFDC13Q8IUB5 93 aa7.71□□□□□ -1.18
CHCHD3-204ENST00000457942 PRR15Q8IV56 129 aa7.71□□□□□ -1.18
CHCHD3-204ENST00000457942 BPY2O14599 106 aa7.69□□□□□ -1.18
CHCHD3-204ENST00000457942 MMP24-AS1A0A0U1RRL7 71 aa7.68□□□□□ -1.18
CHCHD3-204ENST00000457942 Q8N9L7 120 aa7.67□□□□□ -1.18
CHCHD3-204ENST00000457942 ETDBQ3ZM63 59 aa7.66□□□□□ -1.18
CHCHD3-204ENST00000457942 LINC00846Q9NV44 126 aa7.66□□□□□ -1.18
CHCHD3-204ENST00000457942 KRTAP19-6Q3LI70 58 aa7.64□□□□□ -1.19
CHCHD3-204ENST00000457942 F8W1H4 67 aa7.63□□□□□ -1.19
CHCHD3-204ENST00000457942 NDUFS5O43920 106 aa7.62□□□□□ -1.19
CHCHD3-204ENST00000457942 TMEM254Q8TBM7 123 aa7.62□□□□□ -1.19
CHCHD3-204ENST00000457942 MRPL34Q9BQ48 92 aaKnown RBP7.62□□□□□ -1.19
CHCHD3-204ENST00000457942 hDV103S1A0JD37 113 aa7.61□□□□□ -1.19
CHCHD3-204ENST00000457942 KRTAP6-3Q3LI67 103 aa7.6□□□□□ -1.19
CHCHD3-204ENST00000457942 UBL5Q9BZL1 73 aa7.6□□□□□ -1.19
CHCHD3-204ENST00000457942 A0A1B0GV90 55 aa7.54□□□□□ -1.2
CHCHD3-204ENST00000457942 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
CHCHD3-204ENST00000457942 IGKV2D-30A0A075B6S6 120 aa7.53□□□□□ -1.2
CHCHD3-204ENST00000457942 IGKV2-30P06310 120 aa7.53□□□□□ -1.2
CHCHD3-204ENST00000457942 NEBP20929 6669 aa7.52□□□□□ -1.21
CHCHD3-204ENST00000457942 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
CHCHD3-204ENST00000457942 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
CHCHD3-204ENST00000457942 Q5W150 140 aa7.48□□□□□ -1.21
CHCHD3-204ENST00000457942 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
CHCHD3-204ENST00000457942 CXCL6P80162 114 aa7.43□□□□□ -1.22
CHCHD3-204ENST00000457942 MUC12Q9UKN1 5478 aa7.39□□□□□ -1.23
CHCHD3-204ENST00000457942 ACYP1P07311 99 aa7.38□□□□□ -1.23
CHCHD3-204ENST00000457942 FAM240AA0A1B0GVK7 77 aa7.37□□□□□ -1.23
CHCHD3-204ENST00000457942 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
CHCHD3-204ENST00000457942 KRTAP20-1Q3LI63 56 aa7.36□□□□□ -1.23
CHCHD3-204ENST00000457942 HIST1H4AP62805 103 aaKnown RBP7.32□□□□□ -1.24
CHCHD3-204ENST00000457942 FAM236AA0A1B0GUQ0 79 aa7.3□□□□□ -1.24
CHCHD3-204ENST00000457942 FAM236BA0A1B0GV22 79 aa7.3□□□□□ -1.24
CHCHD3-204ENST00000457942 ATP5EP2Q5VTU8 51 aa7.3□□□□□ -1.24
CHCHD3-204ENST00000457942 C5orf47Q569G3 176 aa7.29□□□□□ -1.24
CHCHD3-204ENST00000457942 A0A087WVE0 104 aa7.27□□□□□ -1.25
CHCHD3-204ENST00000457942 TP53AIP1Q9HCN2 124 aa7.26□□□□□ -1.25
CHCHD3-204ENST00000457942 S4R3F8 94 aa7.26□□□□□ -1.25
CHCHD3-204ENST00000457942 LINC00643Q86TS7 51 aa7.25□□□□□ -1.25
CHCHD3-204ENST00000457942 C1orf64Q8NEQ6 169 aa7.22□□□□□ -1.25
CHCHD3-204ENST00000457942 TRAV22A0A0B4J277 110 aa7.19□□□□□ -1.26
CHCHD3-204ENST00000457942 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
CHCHD3-204ENST00000457942 J3QR89 54 aa7.18□□□□□ -1.26
CHCHD3-204ENST00000457942 KRTAP3-1Q9BYR8 98 aa7.18□□□□□ -1.26
CHCHD3-204ENST00000457942 LCA10Q71F78 164 aa7.17□□□□□ -1.26
CHCHD3-204ENST00000457942 A6NN06 94 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms