RNA–Protein interactions for RNA: ENST00000453216.1

TRAM2-AS1-201, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 664 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-201ENST00000453216 DSCR8Q96T75 97 aa13.02□□□□□ -0.33
TRAM2-AS1-201ENST00000453216 UQCR10Q9UDW1 63 aa13.02□□□□□ -0.33
TRAM2-AS1-201ENST00000453216 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.94□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 J3KT08 172 aa12.94□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 MT1FP04733 61 aa12.94□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 C21orf62-AS1Q17RA5 79 aa12.94□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 ZCCHC13Q8WW36 166 aaKnown RBP12.93□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 C9JAW5 83 aa12.92□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 BAALC-AS2P0C853 105 aa12.92□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 MTURNQ8N3F0 131 aa12.92□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 KRTAP10-10P60014 251 aa12.9□□□□□ -0.34
TRAM2-AS1-201ENST00000453216 Q6ZQT0 140 aa12.88□□□□□ -0.35
TRAM2-AS1-201ENST00000453216 KRTAP9-7A8MTY7 169 aa12.87□□□□□ -0.35
TRAM2-AS1-201ENST00000453216 SPINK7P58062 85 aa12.86□□□□□ -0.35
TRAM2-AS1-201ENST00000453216 LCE2BO14633 110 aa12.85□□□□□ -0.35
TRAM2-AS1-201ENST00000453216 NDUFB1O75438 58 aa12.85□□□□□ -0.35
TRAM2-AS1-201ENST00000453216 KRTAP9-3Q9BYQ3 159 aa12.85□□□□□ -0.35
TRAM2-AS1-201ENST00000453216 Q8N9P0 234 aaPredicted RBP12.81□□□□□ -0.36
TRAM2-AS1-201ENST00000453216 TMA7Q9Y2S6 64 aaKnown RBP12.8□□□□□ -0.36
TRAM2-AS1-201ENST00000453216 FCGBPQ9Y6R7 5405 aaPredicted RBP12.79□□□□□ -0.36
TRAM2-AS1-201ENST00000453216 JMJD7-PLA2G4BH0Y9G9 81 aa12.76□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 KRTAP19-1Q8IUB9 90 aa12.76□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 C8orf17Q9NRJ1 99 aa12.76□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 A8MWP4 228 aa12.75□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 ATXN8Q156A1 80 aa12.75□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 LYRM7Q5U5X0 104 aa12.75□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 A0A1B0GW54 56 aa12.74□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 LOC110117498A0A087WWA1 95 aa12.72□□□□□ -0.37
TRAM2-AS1-201ENST00000453216 IGKV3D-7A0A0C4DH55 119 aa12.7□□□□□ -0.38
TRAM2-AS1-201ENST00000453216 WFDC13Q8IUB5 93 aa12.7□□□□□ -0.38
TRAM2-AS1-201ENST00000453216 NAA38Q9BRA0 125 aaKnown RBP12.7□□□□□ -0.38
TRAM2-AS1-201ENST00000453216 PDE6GP18545 87 aa12.69□□□□□ -0.38
TRAM2-AS1-201ENST00000453216 M0R143 59 aa12.67□□□□□ -0.38
TRAM2-AS1-201ENST00000453216 Q6ZVQ6 151 aa12.65□□□□□ -0.38
TRAM2-AS1-201ENST00000453216 C14orf132Q9NPU4 83 aa12.64□□□□□ -0.39
TRAM2-AS1-201ENST00000453216 PRR15Q8IV56 129 aa12.61□□□□□ -0.39
TRAM2-AS1-201ENST00000453216 NREPQ16612 68 aa12.59□□□□□ -0.39
TRAM2-AS1-201ENST00000453216 TMEM254Q8TBM7 123 aa12.54□□□□□ -0.4
TRAM2-AS1-201ENST00000453216 MRPL34Q9BQ48 92 aaKnown RBP12.54□□□□□ -0.4
TRAM2-AS1-201ENST00000453216 MMP24-AS1A0A0U1RRL7 71 aa12.52□□□□□ -0.41
TRAM2-AS1-201ENST00000453216 LINC00846Q9NV44 126 aa12.52□□□□□ -0.41
TRAM2-AS1-201ENST00000453216 MACF1Q9UPN3 7388 aaKnown RBP12.45□□□□□ -0.42
TRAM2-AS1-201ENST00000453216 hDV103S1A0JD37 113 aa12.45□□□□□ -0.42
TRAM2-AS1-201ENST00000453216 NDUFS5O43920 106 aa12.45□□□□□ -0.42
TRAM2-AS1-201ENST00000453216 KRTAP19-6Q3LI70 58 aa12.45□□□□□ -0.42
TRAM2-AS1-201ENST00000453216 H1FX-AS1Q4G0G2 97 aa12.44□□□□□ -0.42
TRAM2-AS1-201ENST00000453216 K7EQZ3 153 aa12.43□□□□□ -0.42
TRAM2-AS1-201ENST00000453216 SMIM6P0DI80 62 aa12.37□□□□□ -0.43
TRAM2-AS1-201ENST00000453216 BATFQ16520 125 aa12.37□□□□□ -0.43
TRAM2-AS1-201ENST00000453216 SYNE2Q8WXH0 6885 aaKnown RBP12.36□□□□□ -0.43
TRAM2-AS1-201ENST00000453216 IGKV2D-30A0A075B6S6 120 aa12.34□□□□□ -0.43
TRAM2-AS1-201ENST00000453216 H3BT86 120 aa12.34□□□□□ -0.43
TRAM2-AS1-201ENST00000453216 IGKV2-30P06310 120 aa12.34□□□□□ -0.43
TRAM2-AS1-201ENST00000453216 BPY2O14599 106 aa12.33□□□□□ -0.44
TRAM2-AS1-201ENST00000453216 C7orf65Q6ZTY9 151 aa12.3□□□□□ -0.44
TRAM2-AS1-201ENST00000453216 TSTD3H0UI37 97 aa12.29□□□□□ -0.44
TRAM2-AS1-201ENST00000453216 Q5W150 140 aa12.29□□□□□ -0.44
TRAM2-AS1-201ENST00000453216 C9orf118A6NHY6 69 aa12.27□□□□□ -0.45
TRAM2-AS1-201ENST00000453216 A0A1W2PPM0 123 aa12.23□□□□□ -0.45
TRAM2-AS1-201ENST00000453216 CASC2Q6XLA1 102 aa12.22□□□□□ -0.45
TRAM2-AS1-201ENST00000453216 Q8N9L7 120 aa12.21□□□□□ -0.45
TRAM2-AS1-201ENST00000453216 HCG22E2RYF7 251 aa12.19□□□□□ -0.46
TRAM2-AS1-201ENST00000453216 TAX1BP3O14907 124 aa12.19□□□□□ -0.46
TRAM2-AS1-201ENST00000453216 C4orf26Q17RF5 130 aa12.15□□□□□ -0.46
TRAM2-AS1-201ENST00000453216 CXCL6P80162 114 aa12.11□□□□□ -0.47
TRAM2-AS1-201ENST00000453216 SPCS1Q9Y6A9 102 aa12.04□□□□□ -0.48
TRAM2-AS1-201ENST00000453216 KRTAP6-3Q3LI67 103 aa12.02□□□□□ -0.49
TRAM2-AS1-201ENST00000453216 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
TRAM2-AS1-201ENST00000453216 SMCPP49901 116 aaPredicted RBP12□□□□□ -0.49
TRAM2-AS1-201ENST00000453216 UBL5Q9BZL1 73 aa11.99□□□□□ -0.49
TRAM2-AS1-201ENST00000453216 FAM236AA0A1B0GUQ0 79 aa11.97□□□□□ -0.49
TRAM2-AS1-201ENST00000453216 FAM236BA0A1B0GV22 79 aa11.97□□□□□ -0.49
TRAM2-AS1-201ENST00000453216 KRTAP3-1Q9BYR8 98 aa11.94□□□□□ -0.5
TRAM2-AS1-201ENST00000453216 S4R3F8 94 aa11.93□□□□□ -0.5
TRAM2-AS1-201ENST00000453216 C1orf64Q8NEQ6 169 aa11.89□□□□□ -0.51
TRAM2-AS1-201ENST00000453216 LOC105371267A0A1B0GV96 52 aa11.88□□□□□ -0.51
TRAM2-AS1-201ENST00000453216 CSAG1Q6PB30 78 aa11.88□□□□□ -0.51
TRAM2-AS1-201ENST00000453216 PRO0461Q9UI25 63 aa11.85□□□□□ -0.51
TRAM2-AS1-201ENST00000453216 LCA10Q71F78 164 aa11.84□□□□□ -0.51
TRAM2-AS1-201ENST00000453216 A6NN06 94 aa11.81□□□□□ -0.52
TRAM2-AS1-201ENST00000453216 MT1BP07438 61 aa11.81□□□□□ -0.52
TRAM2-AS1-201ENST00000453216 Q5VV11 94 aa11.81□□□□□ -0.52
TRAM2-AS1-201ENST00000453216 TP53AIP1Q9HCN2 124 aa11.8□□□□□ -0.52
TRAM2-AS1-201ENST00000453216 COL5A1-AS1Q5SY13 56 aa11.78□□□□□ -0.52
TRAM2-AS1-201ENST00000453216 SPRR2GQ9BYE4 73 aa11.78□□□□□ -0.52
TRAM2-AS1-201ENST00000453216 K7EP34 96 aa11.77□□□□□ -0.53
TRAM2-AS1-201ENST00000453216 KRTAP19-8Q3LI54 63 aa11.75□□□□□ -0.53
TRAM2-AS1-201ENST00000453216 KLKP1Q107X0 134 aa11.68□□□□□ -0.54
TRAM2-AS1-201ENST00000453216 NEBP20929 6669 aa11.64□□□□□ -0.55
TRAM2-AS1-201ENST00000453216 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
TRAM2-AS1-201ENST00000453216 CYP4F30PQ9H0H9 118 aa11.61□□□□□ -0.55
TRAM2-AS1-201ENST00000453216 KRTAP10-5P60370 271 aa11.6□□□□□ -0.55
TRAM2-AS1-201ENST00000453216 GTF2H5Q6ZYL4 71 aa11.58□□□□□ -0.56
TRAM2-AS1-201ENST00000453216 F8W1H4 67 aa11.55□□□□□ -0.56
TRAM2-AS1-201ENST00000453216 ETDBQ3ZM63 59 aa11.54□□□□□ -0.56
TRAM2-AS1-201ENST00000453216 MUC12Q9UKN1 5478 aa11.52□□□□□ -0.57
TRAM2-AS1-201ENST00000453216 A0A087WVE0 104 aa11.51□□□□□ -0.57
TRAM2-AS1-201ENST00000453216 TRAV22A0A0B4J277 110 aa11.51□□□□□ -0.57
TRAM2-AS1-201ENST00000453216 LOC101927531A0A1B0GV80 90 aa11.5□□□□□ -0.57
TRAM2-AS1-201ENST00000453216 CRIPTQ9P021 101 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms