RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 HRES1P13985 223 aa5.41□□□□□ -1.54
USP1-204ENST00000452143 KRTAP10-10P60014 251 aa5.39□□□□□ -1.55
USP1-204ENST00000452143 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
USP1-204ENST00000452143 H3BQ85 93 aa5.38□□□□□ -1.55
USP1-204ENST00000452143 ANKRD29Q8N6D5 301 aa5.38□□□□□ -1.55
USP1-204ENST00000452143 C14orf144Q96I85 54 aa5.38□□□□□ -1.55
USP1-204ENST00000452143 PRO1854Q9UHT4 67 aa5.38□□□□□ -1.55
USP1-204ENST00000452143 DNAL4O96015 105 aa5.37□□□□□ -1.55
USP1-204ENST00000452143 C2orf91Q6ZV80 131 aa5.37□□□□□ -1.55
USP1-204ENST00000452143 NOTCH2NLQ7Z3S9 236 aa5.37□□□□□ -1.55
USP1-204ENST00000452143 MTURNQ8N3F0 131 aa5.37□□□□□ -1.55
USP1-204ENST00000452143 TRIAP1O43715 76 aa5.36□□□□□ -1.55
USP1-204ENST00000452143 CEND1Q8N111 149 aa5.36□□□□□ -1.55
USP1-204ENST00000452143 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
USP1-204ENST00000452143 ORMDL1Q9P0S3 153 aa5.36□□□□□ -1.55
USP1-204ENST00000452143 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
USP1-204ENST00000452143 TRACP01848 142 aa5.35□□□□□ -1.55
USP1-204ENST00000452143 PAM16Q9Y3D7 125 aa5.35□□□□□ -1.55
USP1-204ENST00000452143 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
USP1-204ENST00000452143 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
USP1-204ENST00000452143 CCKP06307 115 aa5.34□□□□□ -1.55
USP1-204ENST00000452143 SPATA45Q537H7 98 aa5.34□□□□□ -1.55
USP1-204ENST00000452143 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
USP1-204ENST00000452143 LINC00846Q9NV44 126 aa5.33□□□□□ -1.56
USP1-204ENST00000452143 A0A1B0GV72 72 aa5.32□□□□□ -1.56
USP1-204ENST00000452143 S100A1P23297 94 aa5.32□□□□□ -1.56
USP1-204ENST00000452143 FXYD2P54710 66 aa5.32□□□□□ -1.56
USP1-204ENST00000452143 VAMP8Q9BV40 100 aa5.32□□□□□ -1.56
USP1-204ENST00000452143 A0A1B0GVX0 72 aa5.31□□□□□ -1.56
USP1-204ENST00000452143 UBE2V1Q13404 147 aa5.3□□□□□ -1.56
USP1-204ENST00000452143 ZCCHC13Q8WW36 166 aaKnown RBP5.3□□□□□ -1.56
USP1-204ENST00000452143 COX6CP09669 75 aa5.29□□□□□ -1.56
USP1-204ENST00000452143 PSMB2P49721 201 aa5.28□□□□□ -1.56
USP1-204ENST00000452143 SPINK7P58062 85 aa5.28□□□□□ -1.56
USP1-204ENST00000452143 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
USP1-204ENST00000452143 A8MWP4 228 aa5.27□□□□□ -1.57
USP1-204ENST00000452143 J3KT08 172 aa5.27□□□□□ -1.57
USP1-204ENST00000452143 HSD52Q0P140 79 aa5.26□□□□□ -1.57
USP1-204ENST00000452143 VPS25Q9BRG1 176 aa5.26□□□□□ -1.57
USP1-204ENST00000452143 K7ERJ3 54 aa5.25□□□□□ -1.57
USP1-204ENST00000452143 RBM3P98179 157 aaKnown RBP5.25□□□□□ -1.57
USP1-204ENST00000452143 DSCR8Q96T75 97 aa5.25□□□□□ -1.57
USP1-204ENST00000452143 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
USP1-204ENST00000452143 WFDC13Q8IUB5 93 aa5.23□□□□□ -1.57
USP1-204ENST00000452143 NDUFB1O75438 58 aa5.22□□□□□ -1.57
USP1-204ENST00000452143 Q6ZQT0 140 aa5.21□□□□□ -1.58
USP1-204ENST00000452143 C9JAW5 83 aa5.2□□□□□ -1.58
USP1-204ENST00000452143 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
USP1-204ENST00000452143 LYRM7Q5U5X0 104 aa5.19□□□□□ -1.58
USP1-204ENST00000452143 A0A1B0GW54 56 aa5.18□□□□□ -1.58
USP1-204ENST00000452143 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
USP1-204ENST00000452143 SCGB1C2P0DMR2 95 aa5.17□□□□□ -1.58
USP1-204ENST00000452143 BAALC-AS2P0C853 105 aa5.15□□□□□ -1.59
USP1-204ENST00000452143 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
USP1-204ENST00000452143 IGKV3D-7A0A0C4DH55 119 aa5.14□□□□□ -1.59
USP1-204ENST00000452143 PYY3Q5JQD4 70 aa5.14□□□□□ -1.59
USP1-204ENST00000452143 Q6ZVQ6 151 aa5.14□□□□□ -1.59
USP1-204ENST00000452143 UQCR10Q9UDW1 63 aa5.14□□□□□ -1.59
USP1-204ENST00000452143 JMJD7-PLA2G4BH0Y9G9 81 aa5.13□□□□□ -1.59
USP1-204ENST00000452143 LOC110117498A0A087WWA1 95 aa5.12□□□□□ -1.59
USP1-204ENST00000452143 PDE6GP18545 87 aa5.12□□□□□ -1.59
USP1-204ENST00000452143 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
USP1-204ENST00000452143 NEBP20929 6669 aa5.11□□□□□ -1.59
USP1-204ENST00000452143 PRR15Q8IV56 129 aa5.11□□□□□ -1.59
USP1-204ENST00000452143 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
USP1-204ENST00000452143 TMEM254Q8TBM7 123 aa5.1□□□□□ -1.59
USP1-204ENST00000452143 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
USP1-204ENST00000452143 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
USP1-204ENST00000452143 ATXN8Q156A1 80 aa5.08□□□□□ -1.6
USP1-204ENST00000452143 NREPQ16612 68 aa5.06□□□□□ -1.6
USP1-204ENST00000452143 hDV103S1A0JD37 113 aa5.05□□□□□ -1.6
USP1-204ENST00000452143 C14orf132Q9NPU4 83 aa5.05□□□□□ -1.6
USP1-204ENST00000452143 NDUFS5O43920 106 aa5.04□□□□□ -1.6
USP1-204ENST00000452143 C7orf65Q6ZTY9 151 aa5.04□□□□□ -1.6
USP1-204ENST00000452143 MUC12Q9UKN1 5478 aa5.03□□□□□ -1.6
USP1-204ENST00000452143 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
USP1-204ENST00000452143 K7EQZ3 153 aa5.02□□□□□ -1.61
USP1-204ENST00000452143 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
USP1-204ENST00000452143 M0R143 59 aa5.01□□□□□ -1.61
USP1-204ENST00000452143 NAA38Q9BRA0 125 aaKnown RBP4.99□□□□□ -1.61
USP1-204ENST00000452143 A6NN06 94 aa4.97□□□□□ -1.61
USP1-204ENST00000452143 Q5W150 140 aa4.97□□□□□ -1.61
USP1-204ENST00000452143 BPY2O14599 106 aa4.96□□□□□ -1.62
USP1-204ENST00000452143 FAM236AA0A1B0GUQ0 79 aa4.95□□□□□ -1.62
USP1-204ENST00000452143 FAM236BA0A1B0GV22 79 aa4.95□□□□□ -1.62
USP1-204ENST00000452143 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
USP1-204ENST00000452143 MT1BP07438 61 aa4.93□□□□□ -1.62
USP1-204ENST00000452143 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
USP1-204ENST00000452143 Q5VV11 94 aa4.93□□□□□ -1.62
USP1-204ENST00000452143 CASC2Q6XLA1 102 aa4.93□□□□□ -1.62
USP1-204ENST00000452143 HCG22E2RYF7 251 aa4.92□□□□□ -1.62
USP1-204ENST00000452143 H3BT86 120 aa4.92□□□□□ -1.62
USP1-204ENST00000452143 CXCL6P80162 114 aa4.92□□□□□ -1.62
USP1-204ENST00000452143 KRTAP19-8Q3LI54 63 aa4.91□□□□□ -1.62
USP1-204ENST00000452143 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
USP1-204ENST00000452143 Q8N9L7 120 aa4.89□□□□□ -1.63
USP1-204ENST00000452143 S4R3F8 94 aa4.89□□□□□ -1.63
USP1-204ENST00000452143 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
USP1-204ENST00000452143 KMT2DO14686 5537 aa4.88□□□□□ -1.63
USP1-204ENST00000452143 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms