RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 BATFQ16520 125 aa11.95□□□□□ -0.5
PMS1-214ENST00000446877 SCGB1C2P0DMR2 95 aa11.94□□□□□ -0.5
PMS1-214ENST00000446877 A0A1W2PNM2 257 aa11.93□□□□□ -0.5
PMS1-214ENST00000446877 KRTAP19-6Q3LI70 58 aa11.93□□□□□ -0.5
PMS1-214ENST00000446877 DNAL4O96015 105 aa11.88□□□□□ -0.51
PMS1-214ENST00000446877 H3BQ85 93 aa11.87□□□□□ -0.51
PMS1-214ENST00000446877 TRACP01848 142 aa11.87□□□□□ -0.51
PMS1-214ENST00000446877 IGHV6-1A0A0B4J1U7 121 aa11.86□□□□□ -0.51
PMS1-214ENST00000446877 TRBV7-4A0A0J9YYF1 115 aa11.85□□□□□ -0.51
PMS1-214ENST00000446877 DEFB116Q30KQ4 102 aa11.85□□□□□ -0.51
PMS1-214ENST00000446877 ANKRD29Q8N6D5 301 aa11.85□□□□□ -0.51
PMS1-214ENST00000446877 NAA38Q9BRA0 125 aaKnown RBP11.85□□□□□ -0.51
PMS1-214ENST00000446877 ORMDL1Q9P0S3 153 aa11.84□□□□□ -0.51
PMS1-214ENST00000446877 LYRM7Q5U5X0 104 aa11.82□□□□□ -0.52
PMS1-214ENST00000446877 C9orf118A6NHY6 69 aa11.81□□□□□ -0.52
PMS1-214ENST00000446877 TAX1BP3O14907 124 aa11.81□□□□□ -0.52
PMS1-214ENST00000446877 TMEM256-PLSCR3K7ERE1 68 aa11.8□□□□□ -0.52
PMS1-214ENST00000446877 LINC00472Q9H8W2 130 aa11.8□□□□□ -0.52
PMS1-214ENST00000446877 ATXN8Q156A1 80 aa11.79□□□□□ -0.52
PMS1-214ENST00000446877 PCP4L1A6NKN8 68 aa11.77□□□□□ -0.53
PMS1-214ENST00000446877 A0A1B0GV72 72 aa11.76□□□□□ -0.53
PMS1-214ENST00000446877 A8MWP4 228 aa11.76□□□□□ -0.53
PMS1-214ENST00000446877 SPINK7P58062 85 aa11.75□□□□□ -0.53
PMS1-214ENST00000446877 KRTAP6-3Q3LI67 103 aa11.75□□□□□ -0.53
PMS1-214ENST00000446877 COL5A1-AS1Q5SY13 56 aa11.75□□□□□ -0.53
PMS1-214ENST00000446877 C8orf87E5RJ46 101 aa11.74□□□□□ -0.53
PMS1-214ENST00000446877 UBE2V1Q13404 147 aa11.73□□□□□ -0.53
PMS1-214ENST00000446877 ZCCHC13Q8WW36 166 aaKnown RBP11.73□□□□□ -0.53
PMS1-214ENST00000446877 A0A1W2PPM0 123 aa11.72□□□□□ -0.53
PMS1-214ENST00000446877 BAALC-AS2P0C853 105 aa11.72□□□□□ -0.53
PMS1-214ENST00000446877 CCKP06307 115 aa11.71□□□□□ -0.53
PMS1-214ENST00000446877 A0A1B0GVX0 72 aa11.69□□□□□ -0.54
PMS1-214ENST00000446877 Q8N9P0 234 aaPredicted RBP11.66□□□□□ -0.54
PMS1-214ENST00000446877 C9JAW5 83 aa11.62□□□□□ -0.55
PMS1-214ENST00000446877 WFDC13Q8IUB5 93 aa11.61□□□□□ -0.55
PMS1-214ENST00000446877 RBM3P98179 157 aaKnown RBP11.6□□□□□ -0.55
PMS1-214ENST00000446877 VPS25Q9BRG1 176 aa11.59□□□□□ -0.55
PMS1-214ENST00000446877 SPCS1Q9Y6A9 102 aa11.58□□□□□ -0.56
PMS1-214ENST00000446877 NEBP20929 6669 aa11.56□□□□□ -0.56
PMS1-214ENST00000446877 JMJD7-PLA2G4BH0Y9G9 81 aa11.56□□□□□ -0.56
PMS1-214ENST00000446877 J3KT08 172 aa11.55□□□□□ -0.56
PMS1-214ENST00000446877 DSCR8Q96T75 97 aa11.55□□□□□ -0.56
PMS1-214ENST00000446877 H3BT86 120 aa11.54□□□□□ -0.56
PMS1-214ENST00000446877 NDUFB1O75438 58 aa11.5□□□□□ -0.57
PMS1-214ENST00000446877 K7EP34 96 aa11.49□□□□□ -0.57
PMS1-214ENST00000446877 PDE6GP18545 87 aa11.46□□□□□ -0.57
PMS1-214ENST00000446877 C21orf62-AS1Q17RA5 79 aa11.46□□□□□ -0.57
PMS1-214ENST00000446877 LOC110117498A0A087WWA1 95 aa11.45□□□□□ -0.58
PMS1-214ENST00000446877 Q6ZQT0 140 aa11.44□□□□□ -0.58
PMS1-214ENST00000446877 GTF2H5Q6ZYL4 71 aa11.44□□□□□ -0.58
PMS1-214ENST00000446877 C14orf132Q9NPU4 83 aa11.42□□□□□ -0.58
PMS1-214ENST00000446877 SMCPP49901 116 aaPredicted RBP11.41□□□□□ -0.58
PMS1-214ENST00000446877 A0A1B0GW54 56 aa11.4□□□□□ -0.58
PMS1-214ENST00000446877 H1FX-AS1Q4G0G2 97 aa11.4□□□□□ -0.58
PMS1-214ENST00000446877 PRO0461Q9UI25 63 aa11.4□□□□□ -0.58
PMS1-214ENST00000446877 C8orf17Q9NRJ1 99 aa11.39□□□□□ -0.59
PMS1-214ENST00000446877 MUC12Q9UKN1 5478 aa11.37□□□□□ -0.59
PMS1-214ENST00000446877 IGKV3D-7A0A0C4DH55 119 aa11.37□□□□□ -0.59
PMS1-214ENST00000446877 F8W1H4 67 aa11.32□□□□□ -0.6
PMS1-214ENST00000446877 Q6ZVQ6 151 aa11.32□□□□□ -0.6
PMS1-214ENST00000446877 A6NN06 94 aa11.24□□□□□ -0.61
PMS1-214ENST00000446877 NREPQ16612 68 aa11.19□□□□□ -0.62
PMS1-214ENST00000446877 PRR15Q8IV56 129 aa11.19□□□□□ -0.62
PMS1-214ENST00000446877 MRPL34Q9BQ48 92 aaKnown RBP11.19□□□□□ -0.62
PMS1-214ENST00000446877 KRTAP20-1Q3LI63 56 aa11.18□□□□□ -0.62
PMS1-214ENST00000446877 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
PMS1-214ENST00000446877 TMEM254Q8TBM7 123 aa11.17□□□□□ -0.62
PMS1-214ENST00000446877 A0A1B0GV90 55 aa11.16□□□□□ -0.62
PMS1-214ENST00000446877 NDUFS5O43920 106 aa11.15□□□□□ -0.62
PMS1-214ENST00000446877 IGKV2D-30A0A075B6S6 120 aa11.13□□□□□ -0.63
PMS1-214ENST00000446877 IGKV2-30P06310 120 aa11.13□□□□□ -0.63
PMS1-214ENST00000446877 MMP24-AS1A0A0U1RRL7 71 aa11.1□□□□□ -0.63
PMS1-214ENST00000446877 FAM236AA0A1B0GUQ0 79 aa11.1□□□□□ -0.63
PMS1-214ENST00000446877 FAM236BA0A1B0GV22 79 aa11.1□□□□□ -0.63
PMS1-214ENST00000446877 Q5VV11 94 aa11.08□□□□□ -0.64
PMS1-214ENST00000446877 hDV103S1A0JD37 113 aa11.07□□□□□ -0.64
PMS1-214ENST00000446877 C7orf65Q6ZTY9 151 aa11.07□□□□□ -0.64
PMS1-214ENST00000446877 MT1BP07438 61 aa11.04□□□□□ -0.64
PMS1-214ENST00000446877 MDN1Q9NU22 5596 aa11.03□□□□□ -0.64
PMS1-214ENST00000446877 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
PMS1-214ENST00000446877 BPY2O14599 106 aa11.02□□□□□ -0.65
PMS1-214ENST00000446877 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
PMS1-214ENST00000446877 C4orf26Q17RF5 130 aa10.98□□□□□ -0.65
PMS1-214ENST00000446877 KMT2DO14686 5537 aa10.98□□□□□ -0.65
PMS1-214ENST00000446877 Q5W150 140 aa10.97□□□□□ -0.65
PMS1-214ENST00000446877 K7EQZ3 153 aa10.96□□□□□ -0.65
PMS1-214ENST00000446877 ACYP1P07311 99 aa10.94□□□□□ -0.66
PMS1-214ENST00000446877 KRTAP10-5P60370 271 aa10.94□□□□□ -0.66
PMS1-214ENST00000446877 KRTAP19-8Q3LI54 63 aa10.94□□□□□ -0.66
PMS1-214ENST00000446877 KRTAP5-9P26371 169 aa10.93□□□□□ -0.66
PMS1-214ENST00000446877 SPRR2GQ9BYE4 73 aa10.93□□□□□ -0.66
PMS1-214ENST00000446877 FAM240AA0A1B0GVK7 77 aa10.9□□□□□ -0.66
PMS1-214ENST00000446877 CSAG1Q6PB30 78 aa10.88□□□□□ -0.67
PMS1-214ENST00000446877 S4R3F8 94 aa10.85□□□□□ -0.67
PMS1-214ENST00000446877 CXCL6P80162 114 aa10.83□□□□□ -0.68
PMS1-214ENST00000446877 Q8N9L7 120 aa10.83□□□□□ -0.68
PMS1-214ENST00000446877 HCG22E2RYF7 251 aa10.81□□□□□ -0.68
PMS1-214ENST00000446877 CASC2Q6XLA1 102 aa10.79□□□□□ -0.68
PMS1-214ENST00000446877 J3QR89 54 aa10.75□□□□□ -0.69
PMS1-214ENST00000446877 KRTAP3-1Q9BYR8 98 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms