RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 JMJD7-PLA2G4BH0Y9G9 81 aa9.69□□□□□ -0.86
ATPAF2-201ENST00000444058 A0A1B0GW54 56 aa9.68□□□□□ -0.86
ATPAF2-201ENST00000444058 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
ATPAF2-201ENST00000444058 FLGP20930 4061 aaPredicted RBP9.68□□□□□ -0.86
ATPAF2-201ENST00000444058 IGHV6-1A0A0B4J1U7 121 aa9.67□□□□□ -0.86
ATPAF2-201ENST00000444058 J3KT08 172 aa9.67□□□□□ -0.86
ATPAF2-201ENST00000444058 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
ATPAF2-201ENST00000444058 C8orf87E5RJ46 101 aa9.66□□□□□ -0.86
ATPAF2-201ENST00000444058 Q6ZQT0 140 aa9.66□□□□□ -0.86
ATPAF2-201ENST00000444058 A0A1B0GVX0 72 aa9.65□□□□□ -0.86
ATPAF2-201ENST00000444058 PCP4L1A6NKN8 68 aa9.65□□□□□ -0.86
ATPAF2-201ENST00000444058 PDE6GP18545 87 aa9.65□□□□□ -0.86
ATPAF2-201ENST00000444058 LOC110117498A0A087WWA1 95 aa9.64□□□□□ -0.87
ATPAF2-201ENST00000444058 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
ATPAF2-201ENST00000444058 A0A1W2PPM0 123 aa9.63□□□□□ -0.87
ATPAF2-201ENST00000444058 FSIP2Q5CZC0 6907 aa9.6□□□□□ -0.87
ATPAF2-201ENST00000444058 NDUFB1O75438 58 aa9.57□□□□□ -0.88
ATPAF2-201ENST00000444058 C14orf132Q9NPU4 83 aa9.54□□□□□ -0.88
ATPAF2-201ENST00000444058 A8MWP4 228 aa9.52□□□□□ -0.89
ATPAF2-201ENST00000444058 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
ATPAF2-201ENST00000444058 SPCS1Q9Y6A9 102 aa9.52□□□□□ -0.89
ATPAF2-201ENST00000444058 CRCT1Q9UGL9 99 aa9.51□□□□□ -0.89
ATPAF2-201ENST00000444058 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
ATPAF2-201ENST00000444058 H3BT86 120 aa9.49□□□□□ -0.89
ATPAF2-201ENST00000444058 HRES1P13985 223 aa9.49□□□□□ -0.89
ATPAF2-201ENST00000444058 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
ATPAF2-201ENST00000444058 RBM12B-AS1Q9P1G2 102 aa9.49□□□□□ -0.89
ATPAF2-201ENST00000444058 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
ATPAF2-201ENST00000444058 C8orf17Q9NRJ1 99 aa9.46□□□□□ -0.9
ATPAF2-201ENST00000444058 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
ATPAF2-201ENST00000444058 K7EP34 96 aa9.45□□□□□ -0.9
ATPAF2-201ENST00000444058 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
ATPAF2-201ENST00000444058 NREPQ16612 68 aa9.45□□□□□ -0.9
ATPAF2-201ENST00000444058 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
ATPAF2-201ENST00000444058 MTURNQ8N3F0 131 aa9.42□□□□□ -0.9
ATPAF2-201ENST00000444058 SPINK7P58062 85 aa9.4□□□□□ -0.9
ATPAF2-201ENST00000444058 Q6ZVQ6 151 aa9.4□□□□□ -0.9
ATPAF2-201ENST00000444058 KRTAP9-8Q9BYQ0 159 aa9.4□□□□□ -0.9
ATPAF2-201ENST00000444058 GTF2H5Q6ZYL4 71 aa9.39□□□□□ -0.91
ATPAF2-201ENST00000444058 PRO0461Q9UI25 63 aa9.38□□□□□ -0.91
ATPAF2-201ENST00000444058 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
ATPAF2-201ENST00000444058 TMEM254Q8TBM7 123 aa9.34□□□□□ -0.91
ATPAF2-201ENST00000444058 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
ATPAF2-201ENST00000444058 MRPL34Q9BQ48 92 aaKnown RBP9.33□□□□□ -0.92
ATPAF2-201ENST00000444058 K7EQZ3 153 aa9.3□□□□□ -0.92
ATPAF2-201ENST00000444058 hDV103S1A0JD37 113 aa9.28□□□□□ -0.92
ATPAF2-201ENST00000444058 F8W1H4 67 aa9.28□□□□□ -0.92
ATPAF2-201ENST00000444058 BPY2O14599 106 aa9.28□□□□□ -0.92
ATPAF2-201ENST00000444058 MT2AP02795 61 aa9.25□□□□□ -0.93
ATPAF2-201ENST00000444058 WFDC13Q8IUB5 93 aa9.24□□□□□ -0.93
ATPAF2-201ENST00000444058 NDUFS5O43920 106 aa9.2□□□□□ -0.94
ATPAF2-201ENST00000444058 ETDBQ3ZM63 59 aa9.18□□□□□ -0.94
ATPAF2-201ENST00000444058 A0A1B0GV90 55 aa9.17□□□□□ -0.94
ATPAF2-201ENST00000444058 MT1FP04733 61 aa9.17□□□□□ -0.94
ATPAF2-201ENST00000444058 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
ATPAF2-201ENST00000444058 Q8N9L7 120 aa9.14□□□□□ -0.95
ATPAF2-201ENST00000444058 UBL5Q9BZL1 73 aa9.14□□□□□ -0.95
ATPAF2-201ENST00000444058 KRTAP10-10P60014 251 aa9.13□□□□□ -0.95
ATPAF2-201ENST00000444058 LINC00846Q9NV44 126 aa9.13□□□□□ -0.95
ATPAF2-201ENST00000444058 USH2AO75445 5202 aa9.12□□□□□ -0.95
ATPAF2-201ENST00000444058 Q5W150 140 aa9.11□□□□□ -0.95
ATPAF2-201ENST00000444058 KRTAP9-3Q9BYQ3 159 aa9.11□□□□□ -0.95
ATPAF2-201ENST00000444058 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
ATPAF2-201ENST00000444058 HCG22E2RYF7 251 aa9.08□□□□□ -0.96
ATPAF2-201ENST00000444058 CXCL6P80162 114 aa9.08□□□□□ -0.96
ATPAF2-201ENST00000444058 IGKV2D-30A0A075B6S6 120 aa9.07□□□□□ -0.96
ATPAF2-201ENST00000444058 IGKV2-30P06310 120 aa9.07□□□□□ -0.96
ATPAF2-201ENST00000444058 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
ATPAF2-201ENST00000444058 SSPOA2VEC9 5147 aa9.05□□□□□ -0.96
ATPAF2-201ENST00000444058 LCE2BO14633 110 aa9.03□□□□□ -0.96
ATPAF2-201ENST00000444058 FAM240AA0A1B0GVK7 77 aa8.97□□□□□ -0.97
ATPAF2-201ENST00000444058 ACYP1P07311 99 aa8.97□□□□□ -0.97
ATPAF2-201ENST00000444058 C4orf26Q17RF5 130 aa8.92□□□□□ -0.98
ATPAF2-201ENST00000444058 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
ATPAF2-201ENST00000444058 KRTAP19-1Q8IUB9 90 aa8.86□□□□□ -0.99
ATPAF2-201ENST00000444058 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.84□□□□□ -0.99
ATPAF2-201ENST00000444058 J3QR89 54 aa8.82□□□□□ -1
ATPAF2-201ENST00000444058 ATP5EP2Q5VTU8 51 aa8.82□□□□□ -1
ATPAF2-201ENST00000444058 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
ATPAF2-201ENST00000444058 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
ATPAF2-201ENST00000444058 C1orf64Q8NEQ6 169 aa8.77□□□□□ -1.01
ATPAF2-201ENST00000444058 KRTAP19-6Q3LI70 58 aa8.76□□□□□ -1.01
ATPAF2-201ENST00000444058 LINC00643Q86TS7 51 aa8.76□□□□□ -1.01
ATPAF2-201ENST00000444058 KRTAP9-7A8MTY7 169 aa8.73□□□□□ -1.01
ATPAF2-201ENST00000444058 S4R3F8 94 aa8.73□□□□□ -1.01
ATPAF2-201ENST00000444058 C5orf47Q569G3 176 aa8.72□□□□□ -1.01
ATPAF2-201ENST00000444058 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
ATPAF2-201ENST00000444058 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.02
ATPAF2-201ENST00000444058 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
ATPAF2-201ENST00000444058 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
ATPAF2-201ENST00000444058 LCA10Q71F78 164 aa8.67□□□□□ -1.02
ATPAF2-201ENST00000444058 MACF1Q9UPN3 7388 aaKnown RBP8.66□□□□□ -1.02
ATPAF2-201ENST00000444058 K7ERU9 68 aa8.66□□□□□ -1.02
ATPAF2-201ENST00000444058 HIST1H4AP62805 103 aaKnown RBP8.66□□□□□ -1.02
ATPAF2-201ENST00000444058 FAM236AA0A1B0GUQ0 79 aa8.61□□□□□ -1.03
ATPAF2-201ENST00000444058 FAM236BA0A1B0GV22 79 aa8.61□□□□□ -1.03
ATPAF2-201ENST00000444058 UQCRQO14949 82 aa8.61□□□□□ -1.03
ATPAF2-201ENST00000444058 A0A087WVE0 104 aa8.59□□□□□ -1.03
ATPAF2-201ENST00000444058 ATOX1O00244 68 aa8.59□□□□□ -1.03
ATPAF2-201ENST00000444058 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms