RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 KRTAP4-12Q9BQ66 201 aa6.69□□□□□ -1.34
HMGN1-208ENST00000443046 HSBP1L1C9JCN9 74 aa6.66□□□□□ -1.34
HMGN1-208ENST00000443046 KRTAP5-9P26371 169 aa6.66□□□□□ -1.34
HMGN1-208ENST00000443046 A0A0B4J2C4 111 aa6.64□□□□□ -1.35
HMGN1-208ENST00000443046 A6NN06 94 aa6.63□□□□□ -1.35
HMGN1-208ENST00000443046 CCKP06307 115 aa6.63□□□□□ -1.35
HMGN1-208ENST00000443046 TRACP01848 142 aa6.61□□□□□ -1.35
HMGN1-208ENST00000443046 A0A1B0GV72 72 aa6.6□□□□□ -1.35
HMGN1-208ENST00000443046 COX8AP10176 69 aa6.6□□□□□ -1.35
HMGN1-208ENST00000443046 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
HMGN1-208ENST00000443046 DLEU1O43261 78 aa6.59□□□□□ -1.35
HMGN1-208ENST00000443046 MT1BP07438 61 aa6.59□□□□□ -1.35
HMGN1-208ENST00000443046 KRTAP4-7Q9BYR0 210 aa6.59□□□□□ -1.35
HMGN1-208ENST00000443046 H3BQ85 93 aa6.58□□□□□ -1.36
HMGN1-208ENST00000443046 HIST1H2BLQ99880 126 aa6.58□□□□□ -1.36
HMGN1-208ENST00000443046 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
HMGN1-208ENST00000443046 ORMDL1Q9P0S3 153 aa6.57□□□□□ -1.36
HMGN1-208ENST00000443046 J3KT08 172 aa6.55□□□□□ -1.36
HMGN1-208ENST00000443046 TMEM256-PLSCR3K7ERE1 68 aa6.55□□□□□ -1.36
HMGN1-208ENST00000443046 TRIAP1O43715 76 aa6.55□□□□□ -1.36
HMGN1-208ENST00000443046 PRO1854Q9UHT4 67 aa6.55□□□□□ -1.36
HMGN1-208ENST00000443046 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
HMGN1-208ENST00000443046 DNAL4O96015 105 aa6.52□□□□□ -1.37
HMGN1-208ENST00000443046 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.37
HMGN1-208ENST00000443046 KRTAP10-5P60370 271 aa6.52□□□□□ -1.37
HMGN1-208ENST00000443046 KRTAP19-8Q3LI54 63 aa6.52□□□□□ -1.37
HMGN1-208ENST00000443046 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
HMGN1-208ENST00000443046 IGKV3D-7A0A0C4DH55 119 aa6.51□□□□□ -1.37
HMGN1-208ENST00000443046 UBE2V1Q13404 147 aa6.51□□□□□ -1.37
HMGN1-208ENST00000443046 S100A6P06703 90 aa6.5□□□□□ -1.37
HMGN1-208ENST00000443046 S100A2P29034 98 aa6.5□□□□□ -1.37
HMGN1-208ENST00000443046 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
HMGN1-208ENST00000443046 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
HMGN1-208ENST00000443046 Q5VV11 94 aa6.49□□□□□ -1.37
HMGN1-208ENST00000443046 C2orf91Q6ZV80 131 aa6.49□□□□□ -1.37
HMGN1-208ENST00000443046 CEND1Q8N111 149 aa6.48□□□□□ -1.37
HMGN1-208ENST00000443046 C14orf144Q96I85 54 aa6.48□□□□□ -1.37
HMGN1-208ENST00000443046 DSCR8Q96T75 97 aa6.48□□□□□ -1.37
HMGN1-208ENST00000443046 VPS25Q9BRG1 176 aa6.48□□□□□ -1.37
HMGN1-208ENST00000443046 NDUFB1O75438 58 aa6.47□□□□□ -1.37
HMGN1-208ENST00000443046 Q6ZQT0 140 aa6.47□□□□□ -1.37
HMGN1-208ENST00000443046 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
HMGN1-208ENST00000443046 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
HMGN1-208ENST00000443046 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
HMGN1-208ENST00000443046 Q6ZVQ6 151 aa6.45□□□□□ -1.38
HMGN1-208ENST00000443046 TMEM238LA0A1B0GVL6 79 aa6.44□□□□□ -1.38
HMGN1-208ENST00000443046 FXYD2P54710 66 aa6.44□□□□□ -1.38
HMGN1-208ENST00000443046 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
HMGN1-208ENST00000443046 C9JAW5 83 aa6.38□□□□□ -1.39
HMGN1-208ENST00000443046 PSMB2P49721 201 aa6.38□□□□□ -1.39
HMGN1-208ENST00000443046 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
HMGN1-208ENST00000443046 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
HMGN1-208ENST00000443046 COX6CP09669 75 aa6.37□□□□□ -1.39
HMGN1-208ENST00000443046 SPATA45Q537H7 98 aa6.37□□□□□ -1.39
HMGN1-208ENST00000443046 TMA7Q9Y2S6 64 aaKnown RBP6.37□□□□□ -1.39
HMGN1-208ENST00000443046 PAM16Q9Y3D7 125 aa6.37□□□□□ -1.39
HMGN1-208ENST00000443046 PRR15Q8IV56 129 aa6.36□□□□□ -1.39
HMGN1-208ENST00000443046 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
HMGN1-208ENST00000443046 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
HMGN1-208ENST00000443046 MMP24-AS1A0A0U1RRL7 71 aa6.35□□□□□ -1.39
HMGN1-208ENST00000443046 K7ERJ3 54 aa6.34□□□□□ -1.39
HMGN1-208ENST00000443046 C5orf47Q569G3 176 aa6.34□□□□□ -1.39
HMGN1-208ENST00000443046 IGKV2D-30A0A075B6S6 120 aa6.33□□□□□ -1.4
HMGN1-208ENST00000443046 A0A1B0GW54 56 aa6.33□□□□□ -1.4
HMGN1-208ENST00000443046 IGKV2-30P06310 120 aa6.33□□□□□ -1.4
HMGN1-208ENST00000443046 C7orf65Q6ZTY9 151 aa6.32□□□□□ -1.4
HMGN1-208ENST00000443046 KRTAP4-2Q9BYR5 136 aa6.32□□□□□ -1.4
HMGN1-208ENST00000443046 PYY3Q5JQD4 70 aa6.31□□□□□ -1.4
HMGN1-208ENST00000443046 Q5W150 140 aa6.31□□□□□ -1.4
HMGN1-208ENST00000443046 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
HMGN1-208ENST00000443046 BAALC-AS2P0C853 105 aa6.29□□□□□ -1.4
HMGN1-208ENST00000443046 SPRR2EP22531 72 aa6.29□□□□□ -1.4
HMGN1-208ENST00000443046 SPRR2BP35325 72 aa6.29□□□□□ -1.4
HMGN1-208ENST00000443046 SPRR2AP35326 72 aa6.29□□□□□ -1.4
HMGN1-208ENST00000443046 C4orf26Q17RF5 130 aa6.29□□□□□ -1.4
HMGN1-208ENST00000443046 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
HMGN1-208ENST00000443046 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
HMGN1-208ENST00000443046 KRTAP2-1Q9BYU5 128 aa6.28□□□□□ -1.4
HMGN1-208ENST00000443046 LOC110117498A0A087WWA1 95 aa6.27□□□□□ -1.41
HMGN1-208ENST00000443046 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
HMGN1-208ENST00000443046 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
HMGN1-208ENST00000443046 HSD52Q0P140 79 aa6.26□□□□□ -1.41
HMGN1-208ENST00000443046 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
HMGN1-208ENST00000443046 NDUFS5O43920 106 aa6.25□□□□□ -1.41
HMGN1-208ENST00000443046 KLKP1Q107X0 134 aa6.25□□□□□ -1.41
HMGN1-208ENST00000443046 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
HMGN1-208ENST00000443046 S4R3F8 94 aa6.23□□□□□ -1.41
HMGN1-208ENST00000443046 JMJD7-PLA2G4BH0Y9G9 81 aa6.22□□□□□ -1.41
HMGN1-208ENST00000443046 SCGB1C2P0DMR2 95 aa6.22□□□□□ -1.41
HMGN1-208ENST00000443046 K7EQZ3 153 aa6.21□□□□□ -1.42
HMGN1-208ENST00000443046 NREPQ16612 68 aa6.21□□□□□ -1.42
HMGN1-208ENST00000443046 LCA10Q71F78 164 aa6.21□□□□□ -1.42
HMGN1-208ENST00000443046 PDE6GP18545 87 aa6.2□□□□□ -1.42
HMGN1-208ENST00000443046 IMUPQ9GZP8 106 aa6.2□□□□□ -1.42
HMGN1-208ENST00000443046 LCE1AQ5T7P2 110 aa6.19□□□□□ -1.42
HMGN1-208ENST00000443046 C14orf132Q9NPU4 83 aa6.15□□□□□ -1.42
HMGN1-208ENST00000443046 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
HMGN1-208ENST00000443046 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
HMGN1-208ENST00000443046 GPR98Q8WXG9 6306 aa6.13□□□□□ -1.43
HMGN1-208ENST00000443046 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms