RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 C21orf62-AS1Q17RA5 79 aa9.26□□□□□ -0.93
AC004540.1-201ENST00000439120 C9JAW5 83 aa9.24□□□□□ -0.93
AC004540.1-201ENST00000439120 J3KT08 172 aa9.24□□□□□ -0.93
AC004540.1-201ENST00000439120 HRES1P13985 223 aa9.24□□□□□ -0.93
AC004540.1-201ENST00000439120 BAALC-AS2P0C853 105 aa9.23□□□□□ -0.93
AC004540.1-201ENST00000439120 MPLKIPQ8TAP9 179 aa9.21□□□□□ -0.94
AC004540.1-201ENST00000439120 MTURNQ8N3F0 131 aa9.2□□□□□ -0.94
AC004540.1-201ENST00000439120 NDUFB1O75438 58 aa9.19□□□□□ -0.94
AC004540.1-201ENST00000439120 PCP4L1A6NKN8 68 aa9.18□□□□□ -0.94
AC004540.1-201ENST00000439120 Q6ZQT0 140 aa9.17□□□□□ -0.94
AC004540.1-201ENST00000439120 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
AC004540.1-201ENST00000439120 MT2AP02795 61 aa9.16□□□□□ -0.94
AC004540.1-201ENST00000439120 ATXN8Q156A1 80 aa9.15□□□□□ -0.94
AC004540.1-201ENST00000439120 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
AC004540.1-201ENST00000439120 M0R143 59 aa9.13□□□□□ -0.95
AC004540.1-201ENST00000439120 LYRM7Q5U5X0 104 aa9.13□□□□□ -0.95
AC004540.1-201ENST00000439120 SPINK7P58062 85 aa9.12□□□□□ -0.95
AC004540.1-201ENST00000439120 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
AC004540.1-201ENST00000439120 NAA38Q9BRA0 125 aaKnown RBP9.1□□□□□ -0.95
AC004540.1-201ENST00000439120 A0A1B0GW54 56 aa9.09□□□□□ -0.95
AC004540.1-201ENST00000439120 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
AC004540.1-201ENST00000439120 A8MWP4 228 aa9.08□□□□□ -0.96
AC004540.1-201ENST00000439120 MT1FP04733 61 aa9.08□□□□□ -0.96
AC004540.1-201ENST00000439120 PDE6GP18545 87 aa9.08□□□□□ -0.96
AC004540.1-201ENST00000439120 Q8N9P0 234 aaPredicted RBP9.08□□□□□ -0.96
AC004540.1-201ENST00000439120 C8orf17Q9NRJ1 99 aa9.08□□□□□ -0.96
AC004540.1-201ENST00000439120 USH2AO75445 5202 aa9.07□□□□□ -0.96
AC004540.1-201ENST00000439120 C14orf132Q9NPU4 83 aa9.04□□□□□ -0.96
AC004540.1-201ENST00000439120 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
AC004540.1-201ENST00000439120 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.02□□□□□ -0.97
AC004540.1-201ENST00000439120 Q6ZVQ6 151 aa9.02□□□□□ -0.97
AC004540.1-201ENST00000439120 WFDC13Q8IUB5 93 aa9.02□□□□□ -0.97
AC004540.1-201ENST00000439120 NREPQ16612 68 aa9.01□□□□□ -0.97
AC004540.1-201ENST00000439120 SSPOA2VEC9 5147 aa9□□□□□ -0.97
AC004540.1-201ENST00000439120 KRTAP9-3Q9BYQ3 159 aa8.99□□□□□ -0.97
AC004540.1-201ENST00000439120 LCE2BO14633 110 aa8.98□□□□□ -0.97
AC004540.1-201ENST00000439120 PRR15Q8IV56 129 aa8.98□□□□□ -0.97
AC004540.1-201ENST00000439120 KRTAP9-7A8MTY7 169 aa8.97□□□□□ -0.97
AC004540.1-201ENST00000439120 TSTD3H0UI37 97 aa8.97□□□□□ -0.97
AC004540.1-201ENST00000439120 BATFQ16520 125 aa8.93□□□□□ -0.98
AC004540.1-201ENST00000439120 TMEM254Q8TBM7 123 aa8.93□□□□□ -0.98
AC004540.1-201ENST00000439120 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
AC004540.1-201ENST00000439120 KRTAP19-1Q8IUB9 90 aa8.92□□□□□ -0.98
AC004540.1-201ENST00000439120 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
AC004540.1-201ENST00000439120 NDUFS5O43920 106 aa8.91□□□□□ -0.98
AC004540.1-201ENST00000439120 hDV103S1A0JD37 113 aa8.88□□□□□ -0.99
AC004540.1-201ENST00000439120 K7EQZ3 153 aa8.87□□□□□ -0.99
AC004540.1-201ENST00000439120 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
AC004540.1-201ENST00000439120 H3BT86 120 aa8.85□□□□□ -0.99
AC004540.1-201ENST00000439120 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
AC004540.1-201ENST00000439120 BPY2O14599 106 aa8.82□□□□□ -1
AC004540.1-201ENST00000439120 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
AC004540.1-201ENST00000439120 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
AC004540.1-201ENST00000439120 C9orf118A6NHY6 69 aa8.8□□□□□ -1
AC004540.1-201ENST00000439120 IGKV2-30P06310 120 aa8.8□□□□□ -1
AC004540.1-201ENST00000439120 A0A1W2PPM0 123 aa8.78□□□□□ -1
AC004540.1-201ENST00000439120 C7orf65Q6ZTY9 151 aa8.77□□□□□ -1.01
AC004540.1-201ENST00000439120 A0A1B0GV90 55 aa8.76□□□□□ -1.01
AC004540.1-201ENST00000439120 TAX1BP3O14907 124 aa8.74□□□□□ -1.01
AC004540.1-201ENST00000439120 CASC2Q6XLA1 102 aa8.73□□□□□ -1.01
AC004540.1-201ENST00000439120 KRTAP19-6Q3LI70 58 aa8.71□□□□□ -1.02
AC004540.1-201ENST00000439120 Q5W150 140 aa8.71□□□□□ -1.02
AC004540.1-201ENST00000439120 Q8N9L7 120 aa8.71□□□□□ -1.02
AC004540.1-201ENST00000439120 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
AC004540.1-201ENST00000439120 SPCS1Q9Y6A9 102 aa8.66□□□□□ -1.02
AC004540.1-201ENST00000439120 CXCL6P80162 114 aa8.65□□□□□ -1.02
AC004540.1-201ENST00000439120 MACF1Q9UPN3 7388 aaKnown RBP8.65□□□□□ -1.03
AC004540.1-201ENST00000439120 C4orf26Q17RF5 130 aa8.64□□□□□ -1.03
AC004540.1-201ENST00000439120 COL5A1-AS1Q5SY13 56 aa8.63□□□□□ -1.03
AC004540.1-201ENST00000439120 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
AC004540.1-201ENST00000439120 SYNE2Q8WXH0 6885 aaKnown RBP8.6□□□□□ -1.03
AC004540.1-201ENST00000439120 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
AC004540.1-201ENST00000439120 C5orf47Q569G3 176 aa8.54□□□□□ -1.04
AC004540.1-201ENST00000439120 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.05
AC004540.1-201ENST00000439120 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.05
AC004540.1-201ENST00000439120 S4R3F8 94 aa8.5□□□□□ -1.05
AC004540.1-201ENST00000439120 PRO0461Q9UI25 63 aa8.48□□□□□ -1.05
AC004540.1-201ENST00000439120 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
AC004540.1-201ENST00000439120 K7EP34 96 aa8.46□□□□□ -1.06
AC004540.1-201ENST00000439120 PCP4P48539 62 aa8.45□□□□□ -1.06
AC004540.1-201ENST00000439120 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
AC004540.1-201ENST00000439120 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
AC004540.1-201ENST00000439120 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
AC004540.1-201ENST00000439120 LCA10Q71F78 164 aa8.4□□□□□ -1.06
AC004540.1-201ENST00000439120 KRTAP6-3Q3LI67 103 aa8.39□□□□□ -1.07
AC004540.1-201ENST00000439120 GTF2H5Q6ZYL4 71 aa8.37□□□□□ -1.07
AC004540.1-201ENST00000439120 K7ERU9 68 aa8.35□□□□□ -1.07
AC004540.1-201ENST00000439120 Q5VV11 94 aa8.35□□□□□ -1.07
AC004540.1-201ENST00000439120 A6NN06 94 aa8.33□□□□□ -1.08
AC004540.1-201ENST00000439120 F8W1H4 67 aa8.31□□□□□ -1.08
AC004540.1-201ENST00000439120 ETDBQ3ZM63 59 aa8.3□□□□□ -1.08
AC004540.1-201ENST00000439120 SPRR2GQ9BYE4 73 aa8.3□□□□□ -1.08
AC004540.1-201ENST00000439120 MT1BP07438 61 aa8.28□□□□□ -1.08
AC004540.1-201ENST00000439120 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
AC004540.1-201ENST00000439120 CYP4F30PQ9H0H9 118 aa8.27□□□□□ -1.09
AC004540.1-201ENST00000439120 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
AC004540.1-201ENST00000439120 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
AC004540.1-201ENST00000439120 SCGB1A1P11684 91 aa8.23□□□□□ -1.09
AC004540.1-201ENST00000439120 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
AC004540.1-201ENST00000439120 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms