RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SEC11AP67812 179 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 TMEM141Q96I45 108 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 CDKN2A-AS1Q9UH64 79 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 ERG28Q9UKR5 140 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 CYSLTR1Q9Y271 337 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 A0A087WSZ3 146 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 BORCS7-ASMTA0A0B4J1R7 106 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 PPP1R17O96001 155 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 MT1EP04732 61 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 LINC00158P58513 81 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 LSM3P62310 102 aaKnown RBP0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 RGS21Q2M5E4 152 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 LINC01554Q52M75 96 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 SMIM4Q8WVI0 70 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 BORCS7Q96B45 105 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 SMIM3Q9BZL3 60 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 NXT2Q9NPJ8 142 aaKnown RBP0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 CRIPTQ9P021 101 aa0.78□□□□□ -2.28
HMGB3P12-201ENST00000438745 F8WEM9 126 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 SIX6O95475 246 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 GNGT1P63211 74 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 COX17Q14061 63 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 MT1MQ8N339 61 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 C9orf62Q8N4C0 152 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 AMELXQ99217 191 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 TCEAL7Q9BRU2 100 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 SMIM2Q9BVW6 85 aa0.77□□□□□ -2.29
HMGB3P12-201ENST00000438745 TRBV7-7A0A0K0K1E9 115 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 TEX49A0A1B0GTD5 131 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 CCDC160A6NGH7 325 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 PFDN1O60925 122 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 SPINK8P0C7L1 97 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 BAALC-AS2P0C853 105 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 S100A7L2Q5SY68 101 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 LYRM7Q5U5X0 104 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 CSAG1Q6PB30 78 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 SFT2D1Q8WV19 159 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 DSCR8Q96T75 97 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 SIGMAR1Q99720 223 aa0.76□□□□□ -2.29
HMGB3P12-201ENST00000438745 TRAV23DV6A0A075B6W5 121 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 PHGR1C9JFL3 82 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 PDE6DO43924 150 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 NDUFB6O95139 128 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 KRTAP19-7Q3SYF9 63 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 RPL7L1Q6DKI1 246 aaKnown RBP0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 TOMM5Q8N4H5 51 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 CNFNQ9BYD5 112 aa0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 NHP2Q9NX24 153 aaKnown RBP0.75□□□□□ -2.29
HMGB3P12-201ENST00000438745 ZNF815PA8K554 130 aa0.74□□□□□ -2.29
HMGB3P12-201ENST00000438745 H3BRM9 83 aa0.74□□□□□ -2.29
HMGB3P12-201ENST00000438745 HIST1H2BLQ99880 126 aa0.74□□□□□ -2.29
HMGB3P12-201ENST00000438745 BIN3Q9NQY0 253 aa0.74□□□□□ -2.29
HMGB3P12-201ENST00000438745 SS18L2Q9UHA2 77 aa0.74□□□□□ -2.29
HMGB3P12-201ENST00000438745 HSPB11Q9Y547 144 aa0.74□□□□□ -2.29
HMGB3P12-201ENST00000438745 LOC110117498A0A087WWA1 95 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 TRAV12-1A0A0B4J245 112 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 CTXND1A0A1B0GTU2 59 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 C3orf79P0CE67 100 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 NEDD8Q15843 81 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 Q5BKY6 102 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 MEIG1Q5JSS6 88 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 SFTA2Q6UW10 78 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 CLEC2BQ92478 149 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 C20orf78Q9BR46 151 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 PSMG3Q9BT73 122 aaPredicted RBP0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 CDC42SE1Q9NRR8 79 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 S4R3F8 94 aa0.73□□□□□ -2.29
HMGB3P12-201ENST00000438745 MAP1LC3B2A6NCE7 125 aa0.72□□□□□ -2.29
HMGB3P12-201ENST00000438745 CKS2P33552 79 aa0.72□□□□□ -2.29
HMGB3P12-201ENST00000438745 GNG4P50150 75 aa0.72□□□□□ -2.29
HMGB3P12-201ENST00000438745 SERF2P84101 59 aa0.72□□□□□ -2.29
HMGB3P12-201ENST00000438745 Q6JHZ5 121 aa0.72□□□□□ -2.29
HMGB3P12-201ENST00000438745 MAP1LC3BQ9GZQ8 125 aa0.72□□□□□ -2.29
HMGB3P12-201ENST00000438745 A0A1B0GUT8 65 aa0.71□□□□□ -2.3
HMGB3P12-201ENST00000438745 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
HMGB3P12-201ENST00000438745 DNAL4O96015 105 aa0.71□□□□□ -2.3
HMGB3P12-201ENST00000438745 SMIM13P0DJ93 91 aa0.71□□□□□ -2.3
HMGB3P12-201ENST00000438745 COX7BP24311 80 aa0.71□□□□□ -2.3
HMGB3P12-201ENST00000438745 AKR1C8PQ5T2L2 129 aa0.71□□□□□ -2.3
HMGB3P12-201ENST00000438745 TRAV13-2A0A0B4J235 113 aa0.7□□□□□ -2.3
HMGB3P12-201ENST00000438745 OR13C6PQ8NH95 151 aa0.7□□□□□ -2.3
HMGB3P12-201ENST00000438745 LINC00587B1AMM8 73 aa0.69□□□□□ -2.3
HMGB3P12-201ENST00000438745 KCNRGQ8N5I3 272 aa0.69□□□□□ -2.3
HMGB3P12-201ENST00000438745 MT1LQ93083 61 aa0.69□□□□□ -2.3
HMGB3P12-201ENST00000438745 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
HMGB3P12-201ENST00000438745 IGLV5-48A0A075B6I7 105 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 IGIPA6NJ69 53 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 HIGD1CA8MV81 97 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 K7EQZ3 153 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 TIMM17BO60830 172 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 G0S2P27469 103 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 ELOF1P60002 83 aaKnown RBP0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 C14orf132Q9NPU4 83 aa0.68□□□□□ -2.3
HMGB3P12-201ENST00000438745 INE1O15225 51 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 S100A5P33763 92 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 OCIAD2Q56VL3 154 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 TMEM170BQ5T4T1 132 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 TRIQKQ629K1 86 aa0.67□□□□□ -2.3
HMGB3P12-201ENST00000438745 TMEM254Q8TBM7 123 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms