RNA–Protein interactions for RNA: ENST00000432725.1

SF1-208, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-208ENST00000432725 RPS29P62273 56 aaKnown RBP9.06□□□□□ -0.96
SF1-208ENST00000432725 C4orf48Q5BLP8 95 aa9.06□□□□□ -0.96
SF1-208ENST00000432725 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
SF1-208ENST00000432725 A0A087WVE0 104 aa9.05□□□□□ -0.96
SF1-208ENST00000432725 SPINK1P00995 79 aa9.05□□□□□ -0.96
SF1-208ENST00000432725 A8MWP4 228 aa9.04□□□□□ -0.96
SF1-208ENST00000432725 NDUFB1O75438 58 aa9.04□□□□□ -0.96
SF1-208ENST00000432725 PCP4P48539 62 aa9.04□□□□□ -0.96
SF1-208ENST00000432725 PRR4Q16378 134 aa9.03□□□□□ -0.96
SF1-208ENST00000432725 Q96NJ1 140 aa9.03□□□□□ -0.96
SF1-208ENST00000432725 PRR15Q8IV56 129 aa9.01□□□□□ -0.97
SF1-208ENST00000432725 SMIM20Q8N5G0 67 aa9.01□□□□□ -0.97
SF1-208ENST00000432725 K7EQZ3 153 aa9□□□□□ -0.97
SF1-208ENST00000432725 ANAPC13Q9BS18 74 aa9□□□□□ -0.97
SF1-208ENST00000432725 Q8N9L7 120 aa8.99□□□□□ -0.97
SF1-208ENST00000432725 LINC00304Q8N9R0 145 aa8.99□□□□□ -0.97
SF1-208ENST00000432725 DEFB116Q30KQ4 102 aa8.98□□□□□ -0.97
SF1-208ENST00000432725 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
SF1-208ENST00000432725 A0A1B0GVX0 72 aa8.92□□□□□ -0.98
SF1-208ENST00000432725 SERP2Q8N6R1 65 aa8.92□□□□□ -0.98
SF1-208ENST00000432725 C1orf195Q5TG92 126 aa8.91□□□□□ -0.98
SF1-208ENST00000432725 TRAV7A0A075B6U4 112 aa8.9□□□□□ -0.98
SF1-208ENST00000432725 MUC2Q02817 5179 aa8.89□□□□□ -0.99
SF1-208ENST00000432725 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
SF1-208ENST00000432725 UQCRQO14949 82 aa8.88□□□□□ -0.99
SF1-208ENST00000432725 COX7CP15954 63 aa8.88□□□□□ -0.99
SF1-208ENST00000432725 CASC2Q6XLA1 102 aa8.87□□□□□ -0.99
SF1-208ENST00000432725 RETNLBQ9BQ08 111 aa8.87□□□□□ -0.99
SF1-208ENST00000432725 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
SF1-208ENST00000432725 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
SF1-208ENST00000432725 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
SF1-208ENST00000432725 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
SF1-208ENST00000432725 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
SF1-208ENST00000432725 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
SF1-208ENST00000432725 TPRXLQ17RH7 258 aa8.82□□□□□ -1
SF1-208ENST00000432725 TMEM254Q8TBM7 123 aa8.82□□□□□ -1
SF1-208ENST00000432725 IGLV7-46A0A075B6I9 117 aa8.81□□□□□ -1
SF1-208ENST00000432725 TP53AIP1Q9HCN2 124 aa8.79□□□□□ -1
SF1-208ENST00000432725 MRPL34Q9BQ48 92 aaKnown RBP8.78□□□□□ -1
SF1-208ENST00000432725 LINC00313P59037 77 aa8.77□□□□□ -1.01
SF1-208ENST00000432725 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
SF1-208ENST00000432725 C5orf47Q569G3 176 aa8.75□□□□□ -1.01
SF1-208ENST00000432725 MUC17Q685J3 4493 aa8.75□□□□□ -1.01
SF1-208ENST00000432725 CCDC179H3BU77 68 aa8.74□□□□□ -1.01
SF1-208ENST00000432725 A0A0U1RQV1 116 aa8.73□□□□□ -1.01
SF1-208ENST00000432725 H3BPC8 53 aa8.7□□□□□ -1.02
SF1-208ENST00000432725 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
SF1-208ENST00000432725 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
SF1-208ENST00000432725 MP68P56378 58 aa8.69□□□□□ -1.02
SF1-208ENST00000432725 KRTAP13-3Q3SY46 172 aa8.68□□□□□ -1.02
SF1-208ENST00000432725 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
SF1-208ENST00000432725 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
SF1-208ENST00000432725 NDUFC1O43677 76 aa8.67□□□□□ -1.02
SF1-208ENST00000432725 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.02
SF1-208ENST00000432725 NDUFS5O43920 106 aa8.65□□□□□ -1.02
SF1-208ENST00000432725 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
SF1-208ENST00000432725 FAT4Q6V0I7 4981 aa8.63□□□□□ -1.03
SF1-208ENST00000432725 H0Y9P7 68 aa8.61□□□□□ -1.03
SF1-208ENST00000432725 LCE2AQ5TA79 106 aaPredicted RBP8.6□□□□□ -1.03
SF1-208ENST00000432725 ZCCHC13Q8WW36 166 aaKnown RBP8.58□□□□□ -1.04
SF1-208ENST00000432725 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
SF1-208ENST00000432725 TMEM258P61165 79 aa8.55□□□□□ -1.04
SF1-208ENST00000432725 LINC00208Q96KT6 92 aa8.55□□□□□ -1.04
SF1-208ENST00000432725 C20orf166-AS1Q96NR2 134 aa8.54□□□□□ -1.04
SF1-208ENST00000432725 A8MUU9 505 aa8.53□□□□□ -1.04
SF1-208ENST00000432725 H7BZZ5 65 aa8.53□□□□□ -1.04
SF1-208ENST00000432725 SEC61BP60468 96 aaKnown RBP8.53□□□□□ -1.04
SF1-208ENST00000432725 C1orf64Q8NEQ6 169 aa8.53□□□□□ -1.04
SF1-208ENST00000432725 LOC101927531A0A1B0GV80 90 aa8.52□□□□□ -1.05
SF1-208ENST00000432725 XP32Q5T750 250 aa8.52□□□□□ -1.05
SF1-208ENST00000432725 CYSTM1Q9H1C7 97 aa8.5□□□□□ -1.05
SF1-208ENST00000432725 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
SF1-208ENST00000432725 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
SF1-208ENST00000432725 Q5W150 140 aa8.48□□□□□ -1.05
SF1-208ENST00000432725 Q75L30 129 aa8.48□□□□□ -1.05
SF1-208ENST00000432725 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
SF1-208ENST00000432725 SPANXA2-OT1Q8N9U9 137 aa8.43□□□□□ -1.06
SF1-208ENST00000432725 FAM236DA0A1B0GTK5 79 aa8.42□□□□□ -1.06
SF1-208ENST00000432725 FAM236CP0DP71 79 aa8.42□□□□□ -1.06
SF1-208ENST00000432725 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
SF1-208ENST00000432725 IGKV2-30P06310 120 aa8.4□□□□□ -1.06
SF1-208ENST00000432725 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.06
SF1-208ENST00000432725 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
SF1-208ENST00000432725 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
SF1-208ENST00000432725 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
SF1-208ENST00000432725 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
SF1-208ENST00000432725 RPS28P62857 69 aaKnown RBP8.31□□□□□ -1.08
SF1-208ENST00000432725 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
SF1-208ENST00000432725 IGKV2D-30A0A075B6S6 120 aa8.29□□□□□ -1.08
SF1-208ENST00000432725 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
SF1-208ENST00000432725 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
SF1-208ENST00000432725 HRES1P13985 223 aa8.24□□□□□ -1.09
SF1-208ENST00000432725 SPINK7P58062 85 aa8.21□□□□□ -1.1
SF1-208ENST00000432725 MT1HP80294 61 aa8.18□□□□□ -1.1
SF1-208ENST00000432725 A8MUN3 132 aa8.17□□□□□ -1.1
SF1-208ENST00000432725 DMAC1Q96GE9 116 aa8.17□□□□□ -1.1
SF1-208ENST00000432725 LCE2DQ5TA82 110 aaPredicted RBP8.16□□□□□ -1.1
SF1-208ENST00000432725 ACYP2P14621 99 aa8.15□□□□□ -1.1
SF1-208ENST00000432725 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
SF1-208ENST00000432725 COA5Q86WW8 74 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms