RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
GABPB1-205ENST00000429662 IGKV2-24A0A0C4DH68 120 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 PRLHP81277 87 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 APLNQ9ULZ1 77 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 FAT1Q14517 4588 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 A0A087WSZ3 146 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 C9orf163Q8N9P6 203 aa5.42□□□□□ -1.54
GABPB1-205ENST00000429662 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
GABPB1-205ENST00000429662 RPL37AP61513 92 aaKnown RBP5.41□□□□□ -1.54
GABPB1-205ENST00000429662 A8MWP4 228 aa5.4□□□□□ -1.55
GABPB1-205ENST00000429662 PRR15Q8IV56 129 aa5.4□□□□□ -1.55
GABPB1-205ENST00000429662 SRRM2Q9UQ35 2752 aaKnown RBP5.39□□□□□ -1.55
GABPB1-205ENST00000429662 KRTAP29-1A8MX34 341 aaPredicted RBP5.39□□□□□ -1.55
GABPB1-205ENST00000429662 SPANXA2-OT1Q8N9U9 137 aa5.39□□□□□ -1.55
GABPB1-205ENST00000429662 KRTAP1-5Q9BYS1 174 aa5.39□□□□□ -1.55
GABPB1-205ENST00000429662 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
GABPB1-205ENST00000429662 LINC00336Q6ZUF6 198 aa5.38□□□□□ -1.55
GABPB1-205ENST00000429662 PHF5AQ7RTV0 110 aaKnown RBP5.38□□□□□ -1.55
GABPB1-205ENST00000429662 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
GABPB1-205ENST00000429662 V9GYY9 64 aa5.38□□□□□ -1.55
GABPB1-205ENST00000429662 TRAV22A0A0B4J277 110 aa5.37□□□□□ -1.55
GABPB1-205ENST00000429662 Q1T7F1 81 aa5.37□□□□□ -1.55
GABPB1-205ENST00000429662 WFDC13Q8IUB5 93 aa5.37□□□□□ -1.55
GABPB1-205ENST00000429662 NBDYA0A0U1RRE5 68 aa5.36□□□□□ -1.55
GABPB1-205ENST00000429662 LRCOL1A6NCL2 159 aa5.36□□□□□ -1.55
GABPB1-205ENST00000429662 NUPR2A6NF83 97 aa5.36□□□□□ -1.55
GABPB1-205ENST00000429662 C1orf64Q8NEQ6 169 aa5.36□□□□□ -1.55
GABPB1-205ENST00000429662 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
GABPB1-205ENST00000429662 FAM229BQ4G0N7 80 aa5.35□□□□□ -1.55
GABPB1-205ENST00000429662 ZNF706Q9Y5V0 76 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-205ENST00000429662 H0Y9P7 68 aa5.34□□□□□ -1.55
GABPB1-205ENST00000429662 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.55
GABPB1-205ENST00000429662 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
GABPB1-205ENST00000429662 TP53AIP1Q9HCN2 124 aa5.34□□□□□ -1.55
GABPB1-205ENST00000429662 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
GABPB1-205ENST00000429662 RTL8CO15255 209 aa5.33□□□□□ -1.56
GABPB1-205ENST00000429662 CHTF8P0CG12 524 aa5.33□□□□□ -1.56
GABPB1-205ENST00000429662 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
GABPB1-205ENST00000429662 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
GABPB1-205ENST00000429662 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
GABPB1-205ENST00000429662 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
GABPB1-205ENST00000429662 MOBPQ13875 183 aa5.31□□□□□ -1.56
GABPB1-205ENST00000429662 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
GABPB1-205ENST00000429662 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
GABPB1-205ENST00000429662 FLG2Q5D862 2391 aaPredicted RBP5.3□□□□□ -1.56
GABPB1-205ENST00000429662 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
GABPB1-205ENST00000429662 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
GABPB1-205ENST00000429662 CDK2AP2O75956 126 aa5.29□□□□□ -1.56
GABPB1-205ENST00000429662 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
GABPB1-205ENST00000429662 Q8N1X5 172 aa5.29□□□□□ -1.56
GABPB1-205ENST00000429662 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
GABPB1-205ENST00000429662 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
GABPB1-205ENST00000429662 LIMD2Q9BT23 127 aa5.27□□□□□ -1.57
GABPB1-205ENST00000429662 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
GABPB1-205ENST00000429662 A0A087WTM6 91 aa5.26□□□□□ -1.57
GABPB1-205ENST00000429662 Q6ZR54 194 aa5.25□□□□□ -1.57
GABPB1-205ENST00000429662 Q96NJ1 140 aa5.25□□□□□ -1.57
GABPB1-205ENST00000429662 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
GABPB1-205ENST00000429662 IGLV5-52A0A0A0MRZ9 124 aa5.24□□□□□ -1.57
GABPB1-205ENST00000429662 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
GABPB1-205ENST00000429662 A0A1B0GVX0 72 aa5.24□□□□□ -1.57
GABPB1-205ENST00000429662 ZNF861PO60384 105 aa5.24□□□□□ -1.57
GABPB1-205ENST00000429662 PLAC8Q9NZF1 115 aa5.24□□□□□ -1.57
GABPB1-205ENST00000429662 PANO1I0J062 215 aa5.23□□□□□ -1.57
GABPB1-205ENST00000429662 PRR4Q16378 134 aa5.23□□□□□ -1.57
GABPB1-205ENST00000429662 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
GABPB1-205ENST00000429662 PLA2G1BP04054 148 aaKnown RBP5.22□□□□□ -1.57
GABPB1-205ENST00000429662 CD164Q04900 197 aa5.21□□□□□ -1.58
GABPB1-205ENST00000429662 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
GABPB1-205ENST00000429662 PSORS1C2Q9UIG4 136 aa5.21□□□□□ -1.58
GABPB1-205ENST00000429662 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
GABPB1-205ENST00000429662 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
GABPB1-205ENST00000429662 PSPHP1O15172 72 aa5.18□□□□□ -1.58
GABPB1-205ENST00000429662 SSBP3-AS1Q7Z2R9 100 aa5.18□□□□□ -1.58
GABPB1-205ENST00000429662 COA5Q86WW8 74 aa5.18□□□□□ -1.58
GABPB1-205ENST00000429662 LRP2P98164 4655 aa5.18□□□□□ -1.58
GABPB1-205ENST00000429662 LOC101927531A0A1B0GV80 90 aa5.17□□□□□ -1.58
GABPB1-205ENST00000429662 C8orf87E5RJ46 101 aa5.17□□□□□ -1.58
GABPB1-205ENST00000429662 A8MUN3 132 aa5.16□□□□□ -1.58
GABPB1-205ENST00000429662 NDUFS5O43920 106 aa5.16□□□□□ -1.58
GABPB1-205ENST00000429662 Q5VV11 94 aa5.16□□□□□ -1.58
GABPB1-205ENST00000429662 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
GABPB1-205ENST00000429662 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
GABPB1-205ENST00000429662 IGLV7-43P04211 117 aa5.16□□□□□ -1.58
GABPB1-205ENST00000429662 C1orf134Q5TEV5 83 aa5.15□□□□□ -1.59
GABPB1-205ENST00000429662 Q75L30 129 aa5.15□□□□□ -1.59
GABPB1-205ENST00000429662 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
GABPB1-205ENST00000429662 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
GABPB1-205ENST00000429662 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
GABPB1-205ENST00000429662 PRR15LQ9BU68 103 aa5.13□□□□□ -1.59
GABPB1-205ENST00000429662 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
GABPB1-205ENST00000429662 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.6
GABPB1-205ENST00000429662 ACYP2P14621 99 aa5.08□□□□□ -1.6
GABPB1-205ENST00000429662 KRTAP13-3Q3SY46 172 aa5.08□□□□□ -1.6
GABPB1-205ENST00000429662 ATP11AUNQ6ZP68 121 aa5.08□□□□□ -1.6
GABPB1-205ENST00000429662 CIRBP-AS1Q8TBR5 109 aa5.08□□□□□ -1.6
GABPB1-205ENST00000429662 ANAPC11Q9NYG5 84 aa5.08□□□□□ -1.6
GABPB1-205ENST00000429662 DNAH8Q96JB1 4490 aa5.08□□□□□ -1.6
GABPB1-205ENST00000429662 HRES1P13985 223 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms