RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 USH2AO75445 5202 aa6.09□□□□□ -1.43
TTC3-208ENST00000428693 SCGB1C2P0DMR2 95 aa6.09□□□□□ -1.43
TTC3-208ENST00000428693 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
TTC3-208ENST00000428693 RBM12B-AS1Q9P1G2 102 aa6.08□□□□□ -1.44
TTC3-208ENST00000428693 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
TTC3-208ENST00000428693 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
TTC3-208ENST00000428693 PYY3Q5JQD4 70 aa6.06□□□□□ -1.44
TTC3-208ENST00000428693 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
TTC3-208ENST00000428693 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
TTC3-208ENST00000428693 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
TTC3-208ENST00000428693 UBE2V1Q13404 147 aa6.04□□□□□ -1.44
TTC3-208ENST00000428693 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
TTC3-208ENST00000428693 UQCR10Q9UDW1 63 aa6.03□□□□□ -1.44
TTC3-208ENST00000428693 A0A1B0GVX0 72 aa6.02□□□□□ -1.45
TTC3-208ENST00000428693 TMA7Q9Y2S6 64 aaKnown RBP6.02□□□□□ -1.45
TTC3-208ENST00000428693 C8orf87E5RJ46 101 aa6.01□□□□□ -1.45
TTC3-208ENST00000428693 C9JAW5 83 aa6□□□□□ -1.45
TTC3-208ENST00000428693 BAALC-AS2P0C853 105 aa6□□□□□ -1.45
TTC3-208ENST00000428693 HRES1P13985 223 aa6□□□□□ -1.45
TTC3-208ENST00000428693 LYRM7Q5U5X0 104 aa5.99□□□□□ -1.45
TTC3-208ENST00000428693 MTURNQ8N3F0 131 aa5.99□□□□□ -1.45
TTC3-208ENST00000428693 MT2AP02795 61 aa5.98□□□□□ -1.45
TTC3-208ENST00000428693 J3KT08 172 aa5.97□□□□□ -1.45
TTC3-208ENST00000428693 NDUFB1O75438 58 aa5.97□□□□□ -1.45
TTC3-208ENST00000428693 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
TTC3-208ENST00000428693 MPLKIPQ8TAP9 179 aa5.96□□□□□ -1.46
TTC3-208ENST00000428693 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.46
TTC3-208ENST00000428693 SPINK7P58062 85 aa5.95□□□□□ -1.46
TTC3-208ENST00000428693 C21orf62-AS1Q17RA5 79 aa5.94□□□□□ -1.46
TTC3-208ENST00000428693 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
TTC3-208ENST00000428693 Q6ZQT0 140 aa5.94□□□□□ -1.46
TTC3-208ENST00000428693 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
TTC3-208ENST00000428693 MT1FP04733 61 aa5.93□□□□□ -1.46
TTC3-208ENST00000428693 ATXN8Q156A1 80 aa5.92□□□□□ -1.46
TTC3-208ENST00000428693 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
TTC3-208ENST00000428693 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
TTC3-208ENST00000428693 KRTAP9-7A8MTY7 169 aa5.9□□□□□ -1.46
TTC3-208ENST00000428693 KRTAP4-7Q9BYR0 210 aa5.9□□□□□ -1.46
TTC3-208ENST00000428693 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
TTC3-208ENST00000428693 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
TTC3-208ENST00000428693 A8MWP4 228 aa5.88□□□□□ -1.47
TTC3-208ENST00000428693 M0R143 59 aa5.88□□□□□ -1.47
TTC3-208ENST00000428693 WFDC13Q8IUB5 93 aa5.88□□□□□ -1.47
TTC3-208ENST00000428693 Q8N9P0 234 aaPredicted RBP5.87□□□□□ -1.47
TTC3-208ENST00000428693 C14orf132Q9NPU4 83 aa5.87□□□□□ -1.47
TTC3-208ENST00000428693 IGKV3D-7A0A0C4DH55 119 aa5.86□□□□□ -1.47
TTC3-208ENST00000428693 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
TTC3-208ENST00000428693 LOC110117498A0A087WWA1 95 aa5.85□□□□□ -1.47
TTC3-208ENST00000428693 NREPQ16612 68 aa5.85□□□□□ -1.47
TTC3-208ENST00000428693 Q6ZVQ6 151 aa5.85□□□□□ -1.47
TTC3-208ENST00000428693 PDE6GP18545 87 aa5.84□□□□□ -1.47
TTC3-208ENST00000428693 NDUFS5O43920 106 aa5.83□□□□□ -1.48
TTC3-208ENST00000428693 A0A1B0GW54 56 aa5.82□□□□□ -1.48
TTC3-208ENST00000428693 BATFQ16520 125 aa5.82□□□□□ -1.48
TTC3-208ENST00000428693 PRR15Q8IV56 129 aa5.81□□□□□ -1.48
TTC3-208ENST00000428693 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
TTC3-208ENST00000428693 TMEM254Q8TBM7 123 aa5.78□□□□□ -1.48
TTC3-208ENST00000428693 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
TTC3-208ENST00000428693 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
TTC3-208ENST00000428693 hDV103S1A0JD37 113 aa5.77□□□□□ -1.49
TTC3-208ENST00000428693 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
TTC3-208ENST00000428693 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
TTC3-208ENST00000428693 IGKV2D-30A0A075B6S6 120 aa5.76□□□□□ -1.49
TTC3-208ENST00000428693 IGKV2-30P06310 120 aa5.76□□□□□ -1.49
TTC3-208ENST00000428693 MACF1Q9UPN3 7388 aaKnown RBP5.76□□□□□ -1.49
TTC3-208ENST00000428693 K7EQZ3 153 aa5.75□□□□□ -1.49
TTC3-208ENST00000428693 TSTD3H0UI37 97 aa5.74□□□□□ -1.49
TTC3-208ENST00000428693 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
TTC3-208ENST00000428693 BPY2O14599 106 aa5.73□□□□□ -1.49
TTC3-208ENST00000428693 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
TTC3-208ENST00000428693 SMIM6P0DI80 62 aa5.71□□□□□ -1.5
TTC3-208ENST00000428693 H3BT86 120 aa5.69□□□□□ -1.5
TTC3-208ENST00000428693 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
TTC3-208ENST00000428693 Q8N9L7 120 aa5.69□□□□□ -1.5
TTC3-208ENST00000428693 A0A1W2PPM0 123 aa5.67□□□□□ -1.5
TTC3-208ENST00000428693 C9orf118A6NHY6 69 aa5.67□□□□□ -1.5
TTC3-208ENST00000428693 HCG22E2RYF7 251 aa5.67□□□□□ -1.5
TTC3-208ENST00000428693 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
TTC3-208ENST00000428693 Q5W150 140 aa5.67□□□□□ -1.5
TTC3-208ENST00000428693 CASC2Q6XLA1 102 aa5.67□□□□□ -1.5
TTC3-208ENST00000428693 TAX1BP3O14907 124 aa5.64□□□□□ -1.51
TTC3-208ENST00000428693 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
TTC3-208ENST00000428693 KRTAP4-2Q9BYR5 136 aa5.64□□□□□ -1.51
TTC3-208ENST00000428693 SPCS1Q9Y6A9 102 aa5.61□□□□□ -1.51
TTC3-208ENST00000428693 FAM236AA0A1B0GUQ0 79 aa5.6□□□□□ -1.51
TTC3-208ENST00000428693 FAM236BA0A1B0GV22 79 aa5.6□□□□□ -1.51
TTC3-208ENST00000428693 C5orf47Q569G3 176 aa5.6□□□□□ -1.51
TTC3-208ENST00000428693 CXCL6P80162 114 aa5.59□□□□□ -1.51
TTC3-208ENST00000428693 UBL5Q9BZL1 73 aa5.57□□□□□ -1.52
TTC3-208ENST00000428693 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
TTC3-208ENST00000428693 S4R3F8 94 aa5.54□□□□□ -1.52
TTC3-208ENST00000428693 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
TTC3-208ENST00000428693 LOC105371267A0A1B0GV96 52 aa5.5□□□□□ -1.53
TTC3-208ENST00000428693 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
TTC3-208ENST00000428693 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
TTC3-208ENST00000428693 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
TTC3-208ENST00000428693 KRTAP6-3Q3LI67 103 aa5.47□□□□□ -1.53
TTC3-208ENST00000428693 COL5A1-AS1Q5SY13 56 aa5.47□□□□□ -1.53
TTC3-208ENST00000428693 LCA10Q71F78 164 aa5.47□□□□□ -1.53
TTC3-208ENST00000428693 A6NN06 94 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms