RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 RBM3P98179 157 aaKnown RBP13.66□□□□□ -0.22
LMO1-202ENST00000428101 MPLKIPQ8TAP9 179 aa13.66□□□□□ -0.22
LMO1-202ENST00000428101 VPS25Q9BRG1 176 aa13.66□□□□□ -0.22
LMO1-202ENST00000428101 FAM236DA0A1B0GTK5 79 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 C9orf118A6NHY6 69 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 FAM236CP0DP71 79 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 DSCR8Q96T75 97 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 A0A1B0GVX0 72 aa13.61□□□□□ -0.23
LMO1-202ENST00000428101 C8orf87E5RJ46 101 aa13.6□□□□□ -0.23
LMO1-202ENST00000428101 TAX1BP3O14907 124 aa13.6□□□□□ -0.23
LMO1-202ENST00000428101 RBM12B-AS1Q9P1G2 102 aa13.58□□□□□ -0.24
LMO1-202ENST00000428101 C9JAW5 83 aa13.55□□□□□ -0.24
LMO1-202ENST00000428101 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
LMO1-202ENST00000428101 JMJD7-PLA2G4BH0Y9G9 81 aa13.54□□□□□ -0.24
LMO1-202ENST00000428101 MT2AP02795 61 aa13.53□□□□□ -0.24
LMO1-202ENST00000428101 Q6ZQT0 140 aa13.51□□□□□ -0.25
LMO1-202ENST00000428101 USH2AO75445 5202 aa13.51□□□□□ -0.25
LMO1-202ENST00000428101 J3KT08 172 aa13.5□□□□□ -0.25
LMO1-202ENST00000428101 C21orf62-AS1Q17RA5 79 aa13.48□□□□□ -0.25
LMO1-202ENST00000428101 ZCCHC13Q8WW36 166 aaKnown RBP13.47□□□□□ -0.25
LMO1-202ENST00000428101 SSPOA2VEC9 5147 aa13.47□□□□□ -0.25
LMO1-202ENST00000428101 LOC110117498A0A087WWA1 95 aa13.45□□□□□ -0.26
LMO1-202ENST00000428101 MT1FP04733 61 aa13.44□□□□□ -0.26
LMO1-202ENST00000428101 COL5A1-AS1Q5SY13 56 aa13.44□□□□□ -0.26
LMO1-202ENST00000428101 PDE6GP18545 87 aa13.43□□□□□ -0.26
LMO1-202ENST00000428101 H3BT86 120 aa13.42□□□□□ -0.26
LMO1-202ENST00000428101 Q8N9P0 234 aaPredicted RBP13.41□□□□□ -0.26
LMO1-202ENST00000428101 C14orf132Q9NPU4 83 aa13.4□□□□□ -0.26
LMO1-202ENST00000428101 SPINK7P58062 85 aa13.39□□□□□ -0.27
LMO1-202ENST00000428101 SPCS1Q9Y6A9 102 aa13.39□□□□□ -0.27
LMO1-202ENST00000428101 NDUFB1O75438 58 aa13.38□□□□□ -0.27
LMO1-202ENST00000428101 A0A1B0GW54 56 aa13.37□□□□□ -0.27
LMO1-202ENST00000428101 MTURNQ8N3F0 131 aa13.37□□□□□ -0.27
LMO1-202ENST00000428101 KRTAP9-3Q9BYQ3 159 aa13.35□□□□□ -0.27
LMO1-202ENST00000428101 A8MWP4 228 aa13.34□□□□□ -0.27
LMO1-202ENST00000428101 C8orf17Q9NRJ1 99 aa13.34□□□□□ -0.27
LMO1-202ENST00000428101 LCE2BO14633 110 aa13.33□□□□□ -0.28
LMO1-202ENST00000428101 KRTAP10-10P60014 251 aa13.33□□□□□ -0.28
LMO1-202ENST00000428101 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
LMO1-202ENST00000428101 IGKV3D-7A0A0C4DH55 119 aa13.31□□□□□ -0.28
LMO1-202ENST00000428101 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.3□□□□□ -0.28
LMO1-202ENST00000428101 Q6ZVQ6 151 aa13.23□□□□□ -0.29
LMO1-202ENST00000428101 K7EP34 96 aa13.22□□□□□ -0.29
LMO1-202ENST00000428101 PRR15Q8IV56 129 aa13.21□□□□□ -0.29
LMO1-202ENST00000428101 WFDC13Q8IUB5 93 aa13.2□□□□□ -0.3
LMO1-202ENST00000428101 SMCPP49901 116 aaPredicted RBP13.19□□□□□ -0.3
LMO1-202ENST00000428101 NREPQ16612 68 aa13.18□□□□□ -0.3
LMO1-202ENST00000428101 KRTAP9-7A8MTY7 169 aa13.17□□□□□ -0.3
LMO1-202ENST00000428101 KRTAP19-1Q8IUB9 90 aa13.17□□□□□ -0.3
LMO1-202ENST00000428101 PRO0461Q9UI25 63 aa13.16□□□□□ -0.3
LMO1-202ENST00000428101 FCGBPQ9Y6R7 5405 aaPredicted RBP13.15□□□□□ -0.3
LMO1-202ENST00000428101 MMP24-AS1A0A0U1RRL7 71 aa13.13□□□□□ -0.31
LMO1-202ENST00000428101 GTF2H5Q6ZYL4 71 aa13.13□□□□□ -0.31
LMO1-202ENST00000428101 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
LMO1-202ENST00000428101 MRPL34Q9BQ48 92 aaKnown RBP13.1□□□□□ -0.31
LMO1-202ENST00000428101 K7EQZ3 153 aa13.04□□□□□ -0.32
LMO1-202ENST00000428101 hDV103S1A0JD37 113 aa13.02□□□□□ -0.33
LMO1-202ENST00000428101 F8W1H4 67 aa13□□□□□ -0.33
LMO1-202ENST00000428101 BPY2O14599 106 aa12.97□□□□□ -0.33
LMO1-202ENST00000428101 NDUFS5O43920 106 aa12.96□□□□□ -0.33
LMO1-202ENST00000428101 H1FX-AS1Q4G0G2 97 aa12.94□□□□□ -0.34
LMO1-202ENST00000428101 Q5W150 140 aa12.9□□□□□ -0.34
LMO1-202ENST00000428101 KRTAP19-6Q3LI70 58 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 UBL5Q9BZL1 73 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 IGKV2D-30A0A075B6S6 120 aa12.86□□□□□ -0.35
LMO1-202ENST00000428101 IGKV2-30P06310 120 aa12.86□□□□□ -0.35
LMO1-202ENST00000428101 Q8N9L7 120 aa12.82□□□□□ -0.36
LMO1-202ENST00000428101 C7orf65Q6ZTY9 151 aa12.81□□□□□ -0.36
LMO1-202ENST00000428101 CASC2Q6XLA1 102 aa12.77□□□□□ -0.37
LMO1-202ENST00000428101 MACF1Q9UPN3 7388 aaKnown RBP12.76□□□□□ -0.37
LMO1-202ENST00000428101 HCG22E2RYF7 251 aa12.75□□□□□ -0.37
LMO1-202ENST00000428101 C4orf26Q17RF5 130 aa12.68□□□□□ -0.38
LMO1-202ENST00000428101 CXCL6P80162 114 aa12.65□□□□□ -0.38
LMO1-202ENST00000428101 SYNE2Q8WXH0 6885 aaKnown RBP12.64□□□□□ -0.39
LMO1-202ENST00000428101 ACYP1P07311 99 aa12.61□□□□□ -0.39
LMO1-202ENST00000428101 A0A1B0GV90 55 aa12.6□□□□□ -0.39
LMO1-202ENST00000428101 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
LMO1-202ENST00000428101 KRTAP3-1Q9BYR8 98 aa12.54□□□□□ -0.4
LMO1-202ENST00000428101 C5orf47Q569G3 176 aa12.5□□□□□ -0.41
LMO1-202ENST00000428101 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
LMO1-202ENST00000428101 S4R3F8 94 aa12.41□□□□□ -0.42
LMO1-202ENST00000428101 C1orf64Q8NEQ6 169 aa12.4□□□□□ -0.42
LMO1-202ENST00000428101 TP53AIP1Q9HCN2 124 aa12.38□□□□□ -0.43
LMO1-202ENST00000428101 FAM236AA0A1B0GUQ0 79 aa12.37□□□□□ -0.43
LMO1-202ENST00000428101 FAM236BA0A1B0GV22 79 aa12.37□□□□□ -0.43
LMO1-202ENST00000428101 KRTAP6-3Q3LI67 103 aa12.36□□□□□ -0.43
LMO1-202ENST00000428101 LCA10Q71F78 164 aa12.36□□□□□ -0.43
LMO1-202ENST00000428101 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
LMO1-202ENST00000428101 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
LMO1-202ENST00000428101 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
LMO1-202ENST00000428101 MT1BP07438 61 aa12.29□□□□□ -0.44
LMO1-202ENST00000428101 SPRR2GQ9BYE4 73 aa12.26□□□□□ -0.45
LMO1-202ENST00000428101 J3QR89 54 aa12.23□□□□□ -0.45
LMO1-202ENST00000428101 KRTAP19-8Q3LI54 63 aa12.23□□□□□ -0.45
LMO1-202ENST00000428101 Q5VV11 94 aa12.21□□□□□ -0.45
LMO1-202ENST00000428101 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
LMO1-202ENST00000428101 A6NN06 94 aa12.18□□□□□ -0.46
LMO1-202ENST00000428101 CYP4F30PQ9H0H9 118 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms