RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 RBM3P98179 157 aaKnown RBP13.66□□□□□ -0.22
LMO1-202ENST00000428101 MPLKIPQ8TAP9 179 aa13.66□□□□□ -0.22
LMO1-202ENST00000428101 VPS25Q9BRG1 176 aa13.66□□□□□ -0.22
LMO1-202ENST00000428101 FAM236DA0A1B0GTK5 79 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 C9orf118A6NHY6 69 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 FAM236CP0DP71 79 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 DSCR8Q96T75 97 aa13.62□□□□□ -0.23
LMO1-202ENST00000428101 A0A1B0GVX0 72 aa13.61□□□□□ -0.23
LMO1-202ENST00000428101 C8orf87E5RJ46 101 aa13.6□□□□□ -0.23
LMO1-202ENST00000428101 TAX1BP3O14907 124 aa13.6□□□□□ -0.23
LMO1-202ENST00000428101 RBM12B-AS1Q9P1G2 102 aa13.58□□□□□ -0.24
LMO1-202ENST00000428101 C9JAW5 83 aa13.55□□□□□ -0.24
LMO1-202ENST00000428101 A0A1W2PPM0 123 aa13.54□□□□□ -0.24
LMO1-202ENST00000428101 JMJD7-PLA2G4BH0Y9G9 81 aa13.54□□□□□ -0.24
LMO1-202ENST00000428101 MT2AP02795 61 aa13.53□□□□□ -0.24
LMO1-202ENST00000428101 Q6ZQT0 140 aa13.51□□□□□ -0.25
LMO1-202ENST00000428101 USH2AO75445 5202 aa13.51□□□□□ -0.25
LMO1-202ENST00000428101 J3KT08 172 aa13.5□□□□□ -0.25
LMO1-202ENST00000428101 C21orf62-AS1Q17RA5 79 aa13.48□□□□□ -0.25
LMO1-202ENST00000428101 ZCCHC13Q8WW36 166 aaKnown RBP13.47□□□□□ -0.25
LMO1-202ENST00000428101 SSPOA2VEC9 5147 aa13.47□□□□□ -0.25
LMO1-202ENST00000428101 LOC110117498A0A087WWA1 95 aa13.45□□□□□ -0.26
LMO1-202ENST00000428101 MT1FP04733 61 aa13.44□□□□□ -0.26
LMO1-202ENST00000428101 COL5A1-AS1Q5SY13 56 aa13.44□□□□□ -0.26
LMO1-202ENST00000428101 PDE6GP18545 87 aa13.43□□□□□ -0.26
LMO1-202ENST00000428101 H3BT86 120 aa13.42□□□□□ -0.26
LMO1-202ENST00000428101 Q8N9P0 234 aaPredicted RBP13.41□□□□□ -0.26
LMO1-202ENST00000428101 C14orf132Q9NPU4 83 aa13.4□□□□□ -0.26
LMO1-202ENST00000428101 SPINK7P58062 85 aa13.39□□□□□ -0.27
LMO1-202ENST00000428101 SPCS1Q9Y6A9 102 aa13.39□□□□□ -0.27
LMO1-202ENST00000428101 NDUFB1O75438 58 aa13.38□□□□□ -0.27
LMO1-202ENST00000428101 A0A1B0GW54 56 aa13.37□□□□□ -0.27
LMO1-202ENST00000428101 MTURNQ8N3F0 131 aa13.37□□□□□ -0.27
LMO1-202ENST00000428101 KRTAP9-3Q9BYQ3 159 aa13.35□□□□□ -0.27
LMO1-202ENST00000428101 A8MWP4 228 aa13.34□□□□□ -0.27
LMO1-202ENST00000428101 C8orf17Q9NRJ1 99 aa13.34□□□□□ -0.27
LMO1-202ENST00000428101 LCE2BO14633 110 aa13.33□□□□□ -0.28
LMO1-202ENST00000428101 KRTAP10-10P60014 251 aa13.33□□□□□ -0.28
LMO1-202ENST00000428101 PCP4L1A6NKN8 68 aa13.32□□□□□ -0.28
LMO1-202ENST00000428101 IGKV3D-7A0A0C4DH55 119 aa13.31□□□□□ -0.28
LMO1-202ENST00000428101 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.3□□□□□ -0.28
LMO1-202ENST00000428101 Q6ZVQ6 151 aa13.23□□□□□ -0.29
LMO1-202ENST00000428101 K7EP34 96 aa13.22□□□□□ -0.29
LMO1-202ENST00000428101 PRR15Q8IV56 129 aa13.21□□□□□ -0.29
LMO1-202ENST00000428101 WFDC13Q8IUB5 93 aa13.2□□□□□ -0.3
LMO1-202ENST00000428101 SMCPP49901 116 aaPredicted RBP13.19□□□□□ -0.3
LMO1-202ENST00000428101 NREPQ16612 68 aa13.18□□□□□ -0.3
LMO1-202ENST00000428101 KRTAP9-7A8MTY7 169 aa13.17□□□□□ -0.3
LMO1-202ENST00000428101 KRTAP19-1Q8IUB9 90 aa13.17□□□□□ -0.3
LMO1-202ENST00000428101 PRO0461Q9UI25 63 aa13.16□□□□□ -0.3
LMO1-202ENST00000428101 FCGBPQ9Y6R7 5405 aaPredicted RBP13.15□□□□□ -0.3
LMO1-202ENST00000428101 MMP24-AS1A0A0U1RRL7 71 aa13.13□□□□□ -0.31
LMO1-202ENST00000428101 GTF2H5Q6ZYL4 71 aa13.13□□□□□ -0.31
LMO1-202ENST00000428101 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
LMO1-202ENST00000428101 MRPL34Q9BQ48 92 aaKnown RBP13.1□□□□□ -0.31
LMO1-202ENST00000428101 K7EQZ3 153 aa13.04□□□□□ -0.32
LMO1-202ENST00000428101 hDV103S1A0JD37 113 aa13.02□□□□□ -0.33
LMO1-202ENST00000428101 F8W1H4 67 aa13□□□□□ -0.33
LMO1-202ENST00000428101 BPY2O14599 106 aa12.97□□□□□ -0.33
LMO1-202ENST00000428101 NDUFS5O43920 106 aa12.96□□□□□ -0.33
LMO1-202ENST00000428101 H1FX-AS1Q4G0G2 97 aa12.94□□□□□ -0.34
LMO1-202ENST00000428101 Q5W150 140 aa12.9□□□□□ -0.34
LMO1-202ENST00000428101 KRTAP19-6Q3LI70 58 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 UBL5Q9BZL1 73 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 LINC00846Q9NV44 126 aa12.88□□□□□ -0.35
LMO1-202ENST00000428101 IGKV2D-30A0A075B6S6 120 aa12.86□□□□□ -0.35
LMO1-202ENST00000428101 IGKV2-30P06310 120 aa12.86□□□□□ -0.35
LMO1-202ENST00000428101 Q8N9L7 120 aa12.82□□□□□ -0.36
LMO1-202ENST00000428101 C7orf65Q6ZTY9 151 aa12.81□□□□□ -0.36
LMO1-202ENST00000428101 CASC2Q6XLA1 102 aa12.77□□□□□ -0.37
LMO1-202ENST00000428101 MACF1Q9UPN3 7388 aaKnown RBP12.76□□□□□ -0.37
LMO1-202ENST00000428101 HCG22E2RYF7 251 aa12.75□□□□□ -0.37
LMO1-202ENST00000428101 C4orf26Q17RF5 130 aa12.68□□□□□ -0.38
LMO1-202ENST00000428101 CXCL6P80162 114 aa12.65□□□□□ -0.38
LMO1-202ENST00000428101 SYNE2Q8WXH0 6885 aaKnown RBP12.64□□□□□ -0.39
LMO1-202ENST00000428101 ACYP1P07311 99 aa12.61□□□□□ -0.39
LMO1-202ENST00000428101 A0A1B0GV90 55 aa12.6□□□□□ -0.39
LMO1-202ENST00000428101 FAM240AA0A1B0GVK7 77 aa12.55□□□□□ -0.4
LMO1-202ENST00000428101 KRTAP3-1Q9BYR8 98 aa12.54□□□□□ -0.4
LMO1-202ENST00000428101 C5orf47Q569G3 176 aa12.5□□□□□ -0.41
LMO1-202ENST00000428101 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
LMO1-202ENST00000428101 S4R3F8 94 aa12.41□□□□□ -0.42
LMO1-202ENST00000428101 C1orf64Q8NEQ6 169 aa12.4□□□□□ -0.42
LMO1-202ENST00000428101 TP53AIP1Q9HCN2 124 aa12.38□□□□□ -0.43
LMO1-202ENST00000428101 FAM236AA0A1B0GUQ0 79 aa12.37□□□□□ -0.43
LMO1-202ENST00000428101 FAM236BA0A1B0GV22 79 aa12.37□□□□□ -0.43
LMO1-202ENST00000428101 KRTAP6-3Q3LI67 103 aa12.36□□□□□ -0.43
LMO1-202ENST00000428101 LCA10Q71F78 164 aa12.36□□□□□ -0.43
LMO1-202ENST00000428101 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
LMO1-202ENST00000428101 HIST1H4AP62805 103 aaKnown RBP12.3□□□□□ -0.44
LMO1-202ENST00000428101 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
LMO1-202ENST00000428101 MT1BP07438 61 aa12.29□□□□□ -0.44
LMO1-202ENST00000428101 SPRR2GQ9BYE4 73 aa12.26□□□□□ -0.45
LMO1-202ENST00000428101 J3QR89 54 aa12.23□□□□□ -0.45
LMO1-202ENST00000428101 KRTAP19-8Q3LI54 63 aa12.23□□□□□ -0.45
LMO1-202ENST00000428101 Q5VV11 94 aa12.21□□□□□ -0.45
LMO1-202ENST00000428101 KRTAP3-3Q9BYR6 98 aa12.2□□□□□ -0.46
LMO1-202ENST00000428101 A6NN06 94 aa12.18□□□□□ -0.46
LMO1-202ENST00000428101 CYP4F30PQ9H0H9 118 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms