RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 CYP4F30PQ9H0H9 118 aa0.37□□□□□ -2.35
RAB3GAP1-202ENST00000425393 NOP10Q9NPE3 64 aaKnown RBP0.37□□□□□ -2.35
RAB3GAP1-202ENST00000425393 SCN3BQ9NY72 215 aa0.37□□□□□ -2.35
RAB3GAP1-202ENST00000425393 RABAC1Q9UI14 185 aa0.37□□□□□ -2.35
RAB3GAP1-202ENST00000425393 R4GMQ9 66 aa0.37□□□□□ -2.35
RAB3GAP1-202ENST00000425393 GVQW2A0A096LPI5 108 aaPredicted RBP0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 LOC100130705A0A1B0GUX0 176 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 CORTO00230 105 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 CCL22O00626 93 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 ATP5EP56381 51 aaPredicted RBP0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 CATR1Q13166 79 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 RPS27LQ71UM5 84 aaKnown RBP0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 SMIM4Q8WVI0 70 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 Q96NJ1 140 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 FAM103A1Q9BTL3 118 aaKnown RBP0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 NPVFQ9HCQ7 196 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 CRIPTQ9P021 101 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 LENEPQ9Y5L5 61 aa0.36□□□□□ -2.35
RAB3GAP1-202ENST00000425393 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 TRAV30A0A087WSZ9 112 aa0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 MIF4GDA9UHW6 222 aaKnown RBP0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 F6UZH7 168 aa0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 PSMG4Q5JS54 123 aa0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 MRPL54Q6P161 138 aaKnown RBP0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 SSBP3-AS1Q7Z2R9 100 aa0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 C5orf38Q86SI9 138 aa0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 GNG8Q9UK08 70 aa0.35□□□□□ -2.35
RAB3GAP1-202ENST00000425393 TRGV1A0A0A0MS02 117 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CTXND1A0A1B0GTU2 59 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 LINC00587B1AMM8 73 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 H3BQ15 152 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SPINK4O60575 86 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SNAPC5O75971 98 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 PPP1R17O96001 155 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 APOC3P02656 99 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 PPP3R1P63098 170 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 Q6ZRX8 168 aa0.34□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TRAV1-2A0A0B4J238 106 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 UBE2L5PA0A1B0GUS4 154 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 FAM24AA6NFZ4 105 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 NMBP08949 121 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 APELAP0DMC3 54 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 IFITM1P13164 125 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 S100PP25815 95 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 UBE2L3P68036 154 aaKnown RBP0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 COX17Q14061 63 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 C9orf153Q5TBE3 101 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SVBPQ8N300 66 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 AMELXQ99217 191 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CGREF1Q99674 301 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 MGST2Q99735 147 aa0.33□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TRBV7-3A0A075B6L6 115 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 A0A096LNI7 61 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 A0A1B0GWA3 101 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 BCE1O60756 84 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SPINK8P0C7L1 97 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 RBP2P50120 134 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 UBE2D2P62837 147 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SPAG11BQ08648 103 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CFAP126Q5VTH2 177 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 MT1MQ8N339 61 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TCEAL7Q9BRU2 100 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 ABRACLQ9P1F3 81 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 UQCR10Q9UDW1 63 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SPCS1Q9Y6A9 102 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 V9GYH0 126 aa0.32□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CFDP00746 253 aaPredicted RBP0.31□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SAA2P0DJI9 122 aaPredicted RBP0.31□□□□□ -2.36
RAB3GAP1-202ENST00000425393 S100A1P23297 94 aa0.31□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TMEM170BQ5T4T1 132 aa0.31□□□□□ -2.36
RAB3GAP1-202ENST00000425393 GTF2H5Q6ZYL4 71 aa0.31□□□□□ -2.36
RAB3GAP1-202ENST00000425393 NDUFA4L2Q9NRX3 87 aa0.31□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TRAV22A0A0B4J277 110 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 H0YAA0 97 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 HMGN4O00479 90 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 UQCR11O14957 56 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 HTN1P15515 57 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 SNRPGP62308 76 aaKnown RBP0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 Q5BKY6 102 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 ENHOQ6UWT2 76 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 BAGE2Q86Y30 109 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 FAM167A-AS1Q96KT0 104 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CACFD1Q9UGQ2 172 aa0.3□□□□□ -2.36
RAB3GAP1-202ENST00000425393 NAP1L6A6NFF2 107 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CRYM-AS1A6NIL9 109 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 ZNF815PA8K554 130 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TMEM262E9PQX1 116 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 F8VRH5 84 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 KRTDAPP60985 99 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 HSD52Q0P140 79 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 CNFNQ9BYD5 112 aa0.29□□□□□ -2.36
RAB3GAP1-202ENST00000425393 K7EIM0 57 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 COX6CP09669 75 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TRAPPC2P0DI81 140 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 TRAPPC2BP0DI82 140 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 GNG11P61952 73 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 LINC01558Q9Y6Z2 57 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 V9GYS6 101 aa0.28□□□□□ -2.36
RAB3GAP1-202ENST00000425393 IGLC7A0M8Q6 106 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms