RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 UQCR10Q9UDW1 63 aa5.76□□□□□ -1.49
SQSTM1-203ENST00000422245 RBM3P98179 157 aaKnown RBP5.75□□□□□ -1.49
SQSTM1-203ENST00000422245 DSCR8Q96T75 97 aa5.75□□□□□ -1.49
SQSTM1-203ENST00000422245 J3KT08 172 aa5.74□□□□□ -1.49
SQSTM1-203ENST00000422245 SCGB1C2P0DMR2 95 aa5.73□□□□□ -1.49
SQSTM1-203ENST00000422245 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
SQSTM1-203ENST00000422245 MT1FP04733 61 aa5.72□□□□□ -1.49
SQSTM1-203ENST00000422245 MTURNQ8N3F0 131 aa5.72□□□□□ -1.49
SQSTM1-203ENST00000422245 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
SQSTM1-203ENST00000422245 C9JAW5 83 aa5.7□□□□□ -1.5
SQSTM1-203ENST00000422245 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
SQSTM1-203ENST00000422245 BAALC-AS2P0C853 105 aa5.69□□□□□ -1.5
SQSTM1-203ENST00000422245 NDUFB1O75438 58 aa5.68□□□□□ -1.5
SQSTM1-203ENST00000422245 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
SQSTM1-203ENST00000422245 Q6ZQT0 140 aa5.68□□□□□ -1.5
SQSTM1-203ENST00000422245 SPINK7P58062 85 aa5.67□□□□□ -1.5
SQSTM1-203ENST00000422245 Q8N9P0 234 aaPredicted RBP5.67□□□□□ -1.5
SQSTM1-203ENST00000422245 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
SQSTM1-203ENST00000422245 LCE2BO14633 110 aa5.66□□□□□ -1.5
SQSTM1-203ENST00000422245 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.5
SQSTM1-203ENST00000422245 A0A1B0GW54 56 aa5.65□□□□□ -1.5
SQSTM1-203ENST00000422245 A8MWP4 228 aa5.65□□□□□ -1.5
SQSTM1-203ENST00000422245 JMJD7-PLA2G4BH0Y9G9 81 aa5.65□□□□□ -1.5
SQSTM1-203ENST00000422245 LOC110117498A0A087WWA1 95 aa5.64□□□□□ -1.51
SQSTM1-203ENST00000422245 ATXN8Q156A1 80 aa5.64□□□□□ -1.51
SQSTM1-203ENST00000422245 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
SQSTM1-203ENST00000422245 PDE6GP18545 87 aa5.63□□□□□ -1.51
SQSTM1-203ENST00000422245 TMA7Q9Y2S6 64 aaKnown RBP5.63□□□□□ -1.51
SQSTM1-203ENST00000422245 M0R143 59 aa5.62□□□□□ -1.51
SQSTM1-203ENST00000422245 LYRM7Q5U5X0 104 aa5.62□□□□□ -1.51
SQSTM1-203ENST00000422245 WFDC13Q8IUB5 93 aa5.62□□□□□ -1.51
SQSTM1-203ENST00000422245 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
SQSTM1-203ENST00000422245 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
SQSTM1-203ENST00000422245 Q6ZVQ6 151 aa5.59□□□□□ -1.51
SQSTM1-203ENST00000422245 PRR15Q8IV56 129 aa5.58□□□□□ -1.52
SQSTM1-203ENST00000422245 NAA38Q9BRA0 125 aaKnown RBP5.58□□□□□ -1.52
SQSTM1-203ENST00000422245 C14orf132Q9NPU4 83 aa5.58□□□□□ -1.52
SQSTM1-203ENST00000422245 LINC00846Q9NV44 126 aa5.56□□□□□ -1.52
SQSTM1-203ENST00000422245 NREPQ16612 68 aa5.55□□□□□ -1.52
SQSTM1-203ENST00000422245 TMEM254Q8TBM7 123 aa5.55□□□□□ -1.52
SQSTM1-203ENST00000422245 MMP24-AS1A0A0U1RRL7 71 aa5.54□□□□□ -1.52
SQSTM1-203ENST00000422245 MRPL34Q9BQ48 92 aaKnown RBP5.54□□□□□ -1.52
SQSTM1-203ENST00000422245 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
SQSTM1-203ENST00000422245 KRTAP19-6Q3LI70 58 aa5.51□□□□□ -1.53
SQSTM1-203ENST00000422245 hDV103S1A0JD37 113 aa5.5□□□□□ -1.53
SQSTM1-203ENST00000422245 H1FX-AS1Q4G0G2 97 aa5.5□□□□□ -1.53
SQSTM1-203ENST00000422245 K7EQZ3 153 aa5.49□□□□□ -1.53
SQSTM1-203ENST00000422245 NDUFS5O43920 106 aa5.49□□□□□ -1.53
SQSTM1-203ENST00000422245 SMIM6P0DI80 62 aa5.49□□□□□ -1.53
SQSTM1-203ENST00000422245 H3BT86 120 aa5.47□□□□□ -1.53
SQSTM1-203ENST00000422245 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
SQSTM1-203ENST00000422245 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
SQSTM1-203ENST00000422245 BPY2O14599 106 aa5.45□□□□□ -1.54
SQSTM1-203ENST00000422245 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
SQSTM1-203ENST00000422245 BATFQ16520 125 aa5.45□□□□□ -1.54
SQSTM1-203ENST00000422245 C7orf65Q6ZTY9 151 aa5.45□□□□□ -1.54
SQSTM1-203ENST00000422245 TSTD3H0UI37 97 aa5.44□□□□□ -1.54
SQSTM1-203ENST00000422245 C9orf118A6NHY6 69 aa5.41□□□□□ -1.54
SQSTM1-203ENST00000422245 Q5W150 140 aa5.41□□□□□ -1.54
SQSTM1-203ENST00000422245 A0A1W2PPM0 123 aa5.4□□□□□ -1.54
SQSTM1-203ENST00000422245 CASC2Q6XLA1 102 aa5.4□□□□□ -1.54
SQSTM1-203ENST00000422245 HCG22E2RYF7 251 aa5.38□□□□□ -1.55
SQSTM1-203ENST00000422245 TAX1BP3O14907 124 aa5.37□□□□□ -1.55
SQSTM1-203ENST00000422245 CXCL6P80162 114 aa5.37□□□□□ -1.55
SQSTM1-203ENST00000422245 Q8N9L7 120 aa5.37□□□□□ -1.55
SQSTM1-203ENST00000422245 C4orf26Q17RF5 130 aa5.35□□□□□ -1.55
SQSTM1-203ENST00000422245 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
SQSTM1-203ENST00000422245 SPCS1Q9Y6A9 102 aa5.32□□□□□ -1.56
SQSTM1-203ENST00000422245 UBL5Q9BZL1 73 aa5.31□□□□□ -1.56
SQSTM1-203ENST00000422245 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
SQSTM1-203ENST00000422245 FAM236AA0A1B0GUQ0 79 aa5.29□□□□□ -1.56
SQSTM1-203ENST00000422245 FAM236BA0A1B0GV22 79 aa5.29□□□□□ -1.56
SQSTM1-203ENST00000422245 SMCPP49901 116 aaPredicted RBP5.28□□□□□ -1.56
SQSTM1-203ENST00000422245 S4R3F8 94 aa5.28□□□□□ -1.56
SQSTM1-203ENST00000422245 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
SQSTM1-203ENST00000422245 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
SQSTM1-203ENST00000422245 C1orf64Q8NEQ6 169 aa5.24□□□□□ -1.57
SQSTM1-203ENST00000422245 Q5VV11 94 aa5.23□□□□□ -1.57
SQSTM1-203ENST00000422245 TP53AIP1Q9HCN2 124 aa5.23□□□□□ -1.57
SQSTM1-203ENST00000422245 PRO0461Q9UI25 63 aa5.23□□□□□ -1.57
SQSTM1-203ENST00000422245 LOC105371267A0A1B0GV96 52 aa5.22□□□□□ -1.57
SQSTM1-203ENST00000422245 A6NN06 94 aa5.22□□□□□ -1.57
SQSTM1-203ENST00000422245 LCA10Q71F78 164 aa5.22□□□□□ -1.57
SQSTM1-203ENST00000422245 K7EP34 96 aa5.21□□□□□ -1.58
SQSTM1-203ENST00000422245 MT1BP07438 61 aa5.21□□□□□ -1.58
SQSTM1-203ENST00000422245 COL5A1-AS1Q5SY13 56 aa5.21□□□□□ -1.58
SQSTM1-203ENST00000422245 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
SQSTM1-203ENST00000422245 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
SQSTM1-203ENST00000422245 KLKP1Q107X0 134 aa5.17□□□□□ -1.58
SQSTM1-203ENST00000422245 NEBP20929 6669 aa5.16□□□□□ -1.58
SQSTM1-203ENST00000422245 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
SQSTM1-203ENST00000422245 GTF2H5Q6ZYL4 71 aa5.12□□□□□ -1.59
SQSTM1-203ENST00000422245 KRTAP3-3Q9BYR6 98 aa5.12□□□□□ -1.59
SQSTM1-203ENST00000422245 CYP4F30PQ9H0H9 118 aa5.12□□□□□ -1.59
SQSTM1-203ENST00000422245 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
SQSTM1-203ENST00000422245 CRIPTQ9P021 101 aa5.11□□□□□ -1.59
SQSTM1-203ENST00000422245 TRAV22A0A0B4J277 110 aa5.1□□□□□ -1.59
SQSTM1-203ENST00000422245 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
SQSTM1-203ENST00000422245 F8W1H4 67 aa5.1□□□□□ -1.59
SQSTM1-203ENST00000422245 ETDBQ3ZM63 59 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms