RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 TMA7Q9Y2S6 64 aaKnown RBP10.76□□□□□ -0.69
PTPN4-202ENST00000420482 BAALC-AS2P0C853 105 aa10.75□□□□□ -0.69
PTPN4-202ENST00000420482 MTURNQ8N3F0 131 aa10.72□□□□□ -0.69
PTPN4-202ENST00000420482 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.71□□□□□ -0.69
PTPN4-202ENST00000420482 NDUFB1O75438 58 aa10.71□□□□□ -0.69
PTPN4-202ENST00000420482 KRTAP9-8Q9BYQ0 159 aa10.71□□□□□ -0.69
PTPN4-202ENST00000420482 KRTAP9-7A8MTY7 169 aa10.7□□□□□ -0.7
PTPN4-202ENST00000420482 USH2AO75445 5202 aa10.69□□□□□ -0.7
PTPN4-202ENST00000420482 HRES1P13985 223 aa10.69□□□□□ -0.7
PTPN4-202ENST00000420482 MPLKIPQ8TAP9 179 aa10.68□□□□□ -0.7
PTPN4-202ENST00000420482 JMJD7-PLA2G4BH0Y9G9 81 aa10.67□□□□□ -0.7
PTPN4-202ENST00000420482 M0R143 59 aa10.67□□□□□ -0.7
PTPN4-202ENST00000420482 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
PTPN4-202ENST00000420482 Q6ZQT0 140 aa10.67□□□□□ -0.7
PTPN4-202ENST00000420482 SSPOA2VEC9 5147 aa10.67□□□□□ -0.7
PTPN4-202ENST00000420482 A0A1B0GW54 56 aa10.66□□□□□ -0.7
PTPN4-202ENST00000420482 ZCCHC13Q8WW36 166 aaKnown RBP10.65□□□□□ -0.7
PTPN4-202ENST00000420482 PDE6GP18545 87 aa10.62□□□□□ -0.71
PTPN4-202ENST00000420482 LYRM7Q5U5X0 104 aa10.59□□□□□ -0.71
PTPN4-202ENST00000420482 LOC110117498A0A087WWA1 95 aa10.58□□□□□ -0.72
PTPN4-202ENST00000420482 A8MWP4 228 aa10.57□□□□□ -0.72
PTPN4-202ENST00000420482 SPINK7P58062 85 aa10.57□□□□□ -0.72
PTPN4-202ENST00000420482 Q8N9P0 234 aaPredicted RBP10.57□□□□□ -0.72
PTPN4-202ENST00000420482 MT2AP02795 61 aa10.56□□□□□ -0.72
PTPN4-202ENST00000420482 C8orf17Q9NRJ1 99 aa10.54□□□□□ -0.72
PTPN4-202ENST00000420482 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
PTPN4-202ENST00000420482 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
PTPN4-202ENST00000420482 FCGBPQ9Y6R7 5405 aaPredicted RBP10.5□□□□□ -0.73
PTPN4-202ENST00000420482 C14orf132Q9NPU4 83 aa10.5□□□□□ -0.73
PTPN4-202ENST00000420482 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
PTPN4-202ENST00000420482 NREPQ16612 68 aa10.48□□□□□ -0.73
PTPN4-202ENST00000420482 Q6ZVQ6 151 aa10.48□□□□□ -0.73
PTPN4-202ENST00000420482 MT1FP04733 61 aa10.46□□□□□ -0.73
PTPN4-202ENST00000420482 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
PTPN4-202ENST00000420482 PRR15Q8IV56 129 aa10.44□□□□□ -0.74
PTPN4-202ENST00000420482 WFDC13Q8IUB5 93 aa10.43□□□□□ -0.74
PTPN4-202ENST00000420482 TSTD3H0UI37 97 aa10.4□□□□□ -0.74
PTPN4-202ENST00000420482 LCE2BO14633 110 aa10.39□□□□□ -0.75
PTPN4-202ENST00000420482 TMEM254Q8TBM7 123 aa10.39□□□□□ -0.75
PTPN4-202ENST00000420482 MRPL34Q9BQ48 92 aaKnown RBP10.39□□□□□ -0.75
PTPN4-202ENST00000420482 KRTAP19-1Q8IUB9 90 aa10.38□□□□□ -0.75
PTPN4-202ENST00000420482 KRTAP9-3Q9BYQ3 159 aa10.38□□□□□ -0.75
PTPN4-202ENST00000420482 BATFQ16520 125 aa10.37□□□□□ -0.75
PTPN4-202ENST00000420482 MMP24-AS1A0A0U1RRL7 71 aa10.34□□□□□ -0.75
PTPN4-202ENST00000420482 H3BT86 120 aa10.34□□□□□ -0.75
PTPN4-202ENST00000420482 hDV103S1A0JD37 113 aa10.33□□□□□ -0.76
PTPN4-202ENST00000420482 NDUFS5O43920 106 aa10.33□□□□□ -0.76
PTPN4-202ENST00000420482 K7EQZ3 153 aa10.29□□□□□ -0.76
PTPN4-202ENST00000420482 C9orf118A6NHY6 69 aa10.28□□□□□ -0.76
PTPN4-202ENST00000420482 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
PTPN4-202ENST00000420482 BPY2O14599 106 aa10.27□□□□□ -0.77
PTPN4-202ENST00000420482 A0A1W2PPM0 123 aa10.24□□□□□ -0.77
PTPN4-202ENST00000420482 H1FX-AS1Q4G0G2 97 aa10.24□□□□□ -0.77
PTPN4-202ENST00000420482 MACF1Q9UPN3 7388 aaKnown RBP10.22□□□□□ -0.77
PTPN4-202ENST00000420482 IGKV2D-30A0A075B6S6 120 aa10.19□□□□□ -0.78
PTPN4-202ENST00000420482 IGKV2-30P06310 120 aa10.19□□□□□ -0.78
PTPN4-202ENST00000420482 C7orf65Q6ZTY9 151 aa10.19□□□□□ -0.78
PTPN4-202ENST00000420482 TAX1BP3O14907 124 aa10.18□□□□□ -0.78
PTPN4-202ENST00000420482 CASC2Q6XLA1 102 aa10.15□□□□□ -0.78
PTPN4-202ENST00000420482 KRTAP19-6Q3LI70 58 aa10.12□□□□□ -0.79
PTPN4-202ENST00000420482 HCG22E2RYF7 251 aa10.1□□□□□ -0.79
PTPN4-202ENST00000420482 SPCS1Q9Y6A9 102 aa10.1□□□□□ -0.79
PTPN4-202ENST00000420482 SYNE2Q8WXH0 6885 aaKnown RBP10.1□□□□□ -0.79
PTPN4-202ENST00000420482 Q5W150 140 aa10.09□□□□□ -0.79
PTPN4-202ENST00000420482 CXCL6P80162 114 aa10.08□□□□□ -0.8
PTPN4-202ENST00000420482 Q8N9L7 120 aa10.08□□□□□ -0.8
PTPN4-202ENST00000420482 UBL5Q9BZL1 73 aa10.06□□□□□ -0.8
PTPN4-202ENST00000420482 LOC105371267A0A1B0GV96 52 aa10□□□□□ -0.81
PTPN4-202ENST00000420482 C4orf26Q17RF5 130 aa10□□□□□ -0.81
PTPN4-202ENST00000420482 SMCPP49901 116 aaPredicted RBP9.97□□□□□ -0.81
PTPN4-202ENST00000420482 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
PTPN4-202ENST00000420482 K7EP34 96 aa9.88□□□□□ -0.83
PTPN4-202ENST00000420482 KRTAP6-3Q3LI67 103 aa9.88□□□□□ -0.83
PTPN4-202ENST00000420482 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
PTPN4-202ENST00000420482 TP53AIP1Q9HCN2 124 aa9.87□□□□□ -0.83
PTPN4-202ENST00000420482 PRO0461Q9UI25 63 aa9.87□□□□□ -0.83
PTPN4-202ENST00000420482 FAM236AA0A1B0GUQ0 79 aa9.86□□□□□ -0.83
PTPN4-202ENST00000420482 FAM236BA0A1B0GV22 79 aa9.86□□□□□ -0.83
PTPN4-202ENST00000420482 S4R3F8 94 aa9.85□□□□□ -0.83
PTPN4-202ENST00000420482 CSAG1Q6PB30 78 aa9.82□□□□□ -0.84
PTPN4-202ENST00000420482 C1orf64Q8NEQ6 169 aa9.82□□□□□ -0.84
PTPN4-202ENST00000420482 GTF2H5Q6ZYL4 71 aa9.81□□□□□ -0.84
PTPN4-202ENST00000420482 KRTAP3-1Q9BYR8 98 aa9.76□□□□□ -0.85
PTPN4-202ENST00000420482 F8W1H4 67 aa9.75□□□□□ -0.85
PTPN4-202ENST00000420482 LCA10Q71F78 164 aa9.73□□□□□ -0.85
PTPN4-202ENST00000420482 ETDBQ3ZM63 59 aa9.67□□□□□ -0.86
PTPN4-202ENST00000420482 Q5VV11 94 aa9.66□□□□□ -0.86
PTPN4-202ENST00000420482 A6NN06 94 aa9.62□□□□□ -0.87
PTPN4-202ENST00000420482 SPRR2GQ9BYE4 73 aa9.62□□□□□ -0.87
PTPN4-202ENST00000420482 CYP4F30PQ9H0H9 118 aa9.62□□□□□ -0.87
PTPN4-202ENST00000420482 TRAV22A0A0B4J277 110 aa9.6□□□□□ -0.87
PTPN4-202ENST00000420482 LOC101927531A0A1B0GV80 90 aa9.59□□□□□ -0.87
PTPN4-202ENST00000420482 KLKP1Q107X0 134 aa9.59□□□□□ -0.87
PTPN4-202ENST00000420482 ACYP1P07311 99 aa9.57□□□□□ -0.88
PTPN4-202ENST00000420482 NEBP20929 6669 aa9.57□□□□□ -0.88
PTPN4-202ENST00000420482 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
PTPN4-202ENST00000420482 MT1BP07438 61 aa9.55□□□□□ -0.88
PTPN4-202ENST00000420482 ATP5EP2Q5VTU8 51 aa9.52□□□□□ -0.89
PTPN4-202ENST00000420482 PCP4L1A6NKN8 68 aa9.51□□□□□ -0.89
PTPN4-202ENST00000420482 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms