RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 PYY3Q5JQD4 70 aa10.79□□□□□ -0.68
ACTB-203ENST00000417101 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
ACTB-203ENST00000417101 FCGBPQ9Y6R7 5405 aaPredicted RBP10.78□□□□□ -0.68
ACTB-203ENST00000417101 KRTAP10-10P60014 251 aa10.76□□□□□ -0.69
ACTB-203ENST00000417101 LCE2BO14633 110 aa10.75□□□□□ -0.69
ACTB-203ENST00000417101 RBM3P98179 157 aaKnown RBP10.75□□□□□ -0.69
ACTB-203ENST00000417101 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
ACTB-203ENST00000417101 KRTAP9-3Q9BYQ3 159 aa10.73□□□□□ -0.69
ACTB-203ENST00000417101 SCGB1C2P0DMR2 95 aa10.72□□□□□ -0.69
ACTB-203ENST00000417101 ZCCHC13Q8WW36 166 aaKnown RBP10.71□□□□□ -0.69
ACTB-203ENST00000417101 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
ACTB-203ENST00000417101 UQCR10Q9UDW1 63 aa10.69□□□□□ -0.7
ACTB-203ENST00000417101 J3KT08 172 aa10.68□□□□□ -0.7
ACTB-203ENST00000417101 SPINK7P58062 85 aa10.67□□□□□ -0.7
ACTB-203ENST00000417101 KRTAP19-1Q8IUB9 90 aa10.67□□□□□ -0.7
ACTB-203ENST00000417101 C9JAW5 83 aa10.66□□□□□ -0.7
ACTB-203ENST00000417101 BAALC-AS2P0C853 105 aa10.65□□□□□ -0.7
ACTB-203ENST00000417101 C21orf62-AS1Q17RA5 79 aa10.64□□□□□ -0.71
ACTB-203ENST00000417101 Q6ZQT0 140 aa10.64□□□□□ -0.71
ACTB-203ENST00000417101 NDUFB1O75438 58 aa10.61□□□□□ -0.71
ACTB-203ENST00000417101 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
ACTB-203ENST00000417101 C8orf17Q9NRJ1 99 aa10.56□□□□□ -0.72
ACTB-203ENST00000417101 LYRM7Q5U5X0 104 aa10.55□□□□□ -0.72
ACTB-203ENST00000417101 A8MWP4 228 aa10.54□□□□□ -0.72
ACTB-203ENST00000417101 WFDC13Q8IUB5 93 aa10.54□□□□□ -0.72
ACTB-203ENST00000417101 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
ACTB-203ENST00000417101 JMJD7-PLA2G4BH0Y9G9 81 aa10.5□□□□□ -0.73
ACTB-203ENST00000417101 TMA7Q9Y2S6 64 aaKnown RBP10.5□□□□□ -0.73
ACTB-203ENST00000417101 LOC110117498A0A087WWA1 95 aa10.49□□□□□ -0.73
ACTB-203ENST00000417101 ATXN8Q156A1 80 aa10.49□□□□□ -0.73
ACTB-203ENST00000417101 MACF1Q9UPN3 7388 aaKnown RBP10.49□□□□□ -0.73
ACTB-203ENST00000417101 A0A1B0GW54 56 aa10.48□□□□□ -0.73
ACTB-203ENST00000417101 NAA38Q9BRA0 125 aaKnown RBP10.48□□□□□ -0.73
ACTB-203ENST00000417101 Q6ZVQ6 151 aa10.47□□□□□ -0.73
ACTB-203ENST00000417101 PDE6GP18545 87 aa10.44□□□□□ -0.74
ACTB-203ENST00000417101 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
ACTB-203ENST00000417101 PRR15Q8IV56 129 aa10.42□□□□□ -0.74
ACTB-203ENST00000417101 LINC00846Q9NV44 126 aa10.41□□□□□ -0.74
ACTB-203ENST00000417101 M0R143 59 aa10.4□□□□□ -0.74
ACTB-203ENST00000417101 KRTAP19-6Q3LI70 58 aa10.4□□□□□ -0.74
ACTB-203ENST00000417101 SYNE2Q8WXH0 6885 aaKnown RBP10.39□□□□□ -0.75
ACTB-203ENST00000417101 NREPQ16612 68 aa10.38□□□□□ -0.75
ACTB-203ENST00000417101 MRPL34Q9BQ48 92 aaKnown RBP10.36□□□□□ -0.75
ACTB-203ENST00000417101 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
ACTB-203ENST00000417101 TMEM254Q8TBM7 123 aa10.35□□□□□ -0.75
ACTB-203ENST00000417101 H1FX-AS1Q4G0G2 97 aa10.31□□□□□ -0.76
ACTB-203ENST00000417101 NDUFS5O43920 106 aa10.3□□□□□ -0.76
ACTB-203ENST00000417101 hDV103S1A0JD37 113 aa10.29□□□□□ -0.76
ACTB-203ENST00000417101 K7EQZ3 153 aa10.28□□□□□ -0.76
ACTB-203ENST00000417101 IGKV2D-30A0A075B6S6 120 aa10.23□□□□□ -0.77
ACTB-203ENST00000417101 IGKV2-30P06310 120 aa10.23□□□□□ -0.77
ACTB-203ENST00000417101 Q5W150 140 aa10.18□□□□□ -0.78
ACTB-203ENST00000417101 BPY2O14599 106 aa10.17□□□□□ -0.78
ACTB-203ENST00000417101 BATFQ16520 125 aa10.17□□□□□ -0.78
ACTB-203ENST00000417101 C7orf65Q6ZTY9 151 aa10.17□□□□□ -0.78
ACTB-203ENST00000417101 H3BT86 120 aa10.14□□□□□ -0.79
ACTB-203ENST00000417101 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
ACTB-203ENST00000417101 Q8N9L7 120 aa10.1□□□□□ -0.79
ACTB-203ENST00000417101 HCG22E2RYF7 251 aa10.08□□□□□ -0.8
ACTB-203ENST00000417101 CASC2Q6XLA1 102 aa10.08□□□□□ -0.8
ACTB-203ENST00000417101 C9orf118A6NHY6 69 aa10.07□□□□□ -0.8
ACTB-203ENST00000417101 C4orf26Q17RF5 130 aa10.07□□□□□ -0.8
ACTB-203ENST00000417101 TSTD3H0UI37 97 aa10.06□□□□□ -0.8
ACTB-203ENST00000417101 KRTAP6-3Q3LI67 103 aa10.06□□□□□ -0.8
ACTB-203ENST00000417101 A0A1W2PPM0 123 aa10.04□□□□□ -0.8
ACTB-203ENST00000417101 TAX1BP3O14907 124 aa10.02□□□□□ -0.81
ACTB-203ENST00000417101 CXCL6P80162 114 aa9.99□□□□□ -0.81
ACTB-203ENST00000417101 C5orf47Q569G3 176 aa9.99□□□□□ -0.81
ACTB-203ENST00000417101 FAM236AA0A1B0GUQ0 79 aa9.94□□□□□ -0.82
ACTB-203ENST00000417101 FAM236BA0A1B0GV22 79 aa9.94□□□□□ -0.82
ACTB-203ENST00000417101 KRTAP3-1Q9BYR8 98 aa9.91□□□□□ -0.82
ACTB-203ENST00000417101 SPCS1Q9Y6A9 102 aa9.89□□□□□ -0.83
ACTB-203ENST00000417101 S4R3F8 94 aa9.89□□□□□ -0.83
ACTB-203ENST00000417101 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
ACTB-203ENST00000417101 UBL5Q9BZL1 73 aa9.86□□□□□ -0.83
ACTB-203ENST00000417101 A6NN06 94 aa9.85□□□□□ -0.83
ACTB-203ENST00000417101 CSAG1Q6PB30 78 aa9.85□□□□□ -0.83
ACTB-203ENST00000417101 MT1BP07438 61 aa9.84□□□□□ -0.83
ACTB-203ENST00000417101 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
ACTB-203ENST00000417101 Q5VV11 94 aa9.82□□□□□ -0.84
ACTB-203ENST00000417101 LCA10Q71F78 164 aa9.82□□□□□ -0.84
ACTB-203ENST00000417101 NEBP20929 6669 aa9.82□□□□□ -0.84
ACTB-203ENST00000417101 SPRR2GQ9BYE4 73 aa9.79□□□□□ -0.84
ACTB-203ENST00000417101 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
ACTB-203ENST00000417101 MUC12Q9UKN1 5478 aa9.76□□□□□ -0.85
ACTB-203ENST00000417101 PRO0461Q9UI25 63 aa9.74□□□□□ -0.85
ACTB-203ENST00000417101 TP53AIP1Q9HCN2 124 aa9.72□□□□□ -0.85
ACTB-203ENST00000417101 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.86
ACTB-203ENST00000417101 KLKP1Q107X0 134 aa9.69□□□□□ -0.86
ACTB-203ENST00000417101 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
ACTB-203ENST00000417101 K7EP34 96 aa9.65□□□□□ -0.86
ACTB-203ENST00000417101 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
ACTB-203ENST00000417101 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
ACTB-203ENST00000417101 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
ACTB-203ENST00000417101 A0A087WVE0 104 aa9.56□□□□□ -0.88
ACTB-203ENST00000417101 CRIPTQ9P021 101 aa9.52□□□□□ -0.89
ACTB-203ENST00000417101 IMUPQ9GZP8 106 aa9.5□□□□□ -0.89
ACTB-203ENST00000417101 KMT2DO14686 5537 aa9.5□□□□□ -0.89
ACTB-203ENST00000417101 MDN1Q9NU22 5596 aa9.49□□□□□ -0.89
ACTB-203ENST00000417101 TRAV22A0A0B4J277 110 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms