RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 C8orf87E5RJ46 101 aa13.37□□□□□ -0.27
VEGFA-207ENST00000413642 JMJD7-PLA2G4BH0Y9G9 81 aa13.37□□□□□ -0.27
VEGFA-207ENST00000413642 LOC105371267A0A1B0GV96 52 aa13.36□□□□□ -0.27
VEGFA-207ENST00000413642 LOC110117498A0A087WWA1 95 aa13.35□□□□□ -0.27
VEGFA-207ENST00000413642 C14orf132Q9NPU4 83 aa13.35□□□□□ -0.27
VEGFA-207ENST00000413642 J3KT08 172 aa13.33□□□□□ -0.28
VEGFA-207ENST00000413642 C21orf62-AS1Q17RA5 79 aa13.33□□□□□ -0.28
VEGFA-207ENST00000413642 FSIP2Q5CZC0 6907 aa13.31□□□□□ -0.28
VEGFA-207ENST00000413642 LYRM7Q5U5X0 104 aa13.3□□□□□ -0.28
VEGFA-207ENST00000413642 CRCT1Q9UGL9 99 aa13.3□□□□□ -0.28
VEGFA-207ENST00000413642 HRES1P13985 223 aa13.27□□□□□ -0.29
VEGFA-207ENST00000413642 PDE6GP18545 87 aa13.25□□□□□ -0.29
VEGFA-207ENST00000413642 C9orf118A6NHY6 69 aa13.23□□□□□ -0.29
VEGFA-207ENST00000413642 TAX1BP3O14907 124 aa13.23□□□□□ -0.29
VEGFA-207ENST00000413642 NDUFB1O75438 58 aa13.23□□□□□ -0.29
VEGFA-207ENST00000413642 A0A1B0GW54 56 aa13.22□□□□□ -0.29
VEGFA-207ENST00000413642 MPLKIPQ8TAP9 179 aa13.22□□□□□ -0.29
VEGFA-207ENST00000413642 IGKV3D-7A0A0C4DH55 119 aa13.21□□□□□ -0.29
VEGFA-207ENST00000413642 FAM236DA0A1B0GTK5 79 aa13.21□□□□□ -0.29
VEGFA-207ENST00000413642 A8MWP4 228 aa13.21□□□□□ -0.29
VEGFA-207ENST00000413642 FAM236CP0DP71 79 aa13.21□□□□□ -0.29
VEGFA-207ENST00000413642 MTURNQ8N3F0 131 aa13.21□□□□□ -0.29
VEGFA-207ENST00000413642 ZCCHC13Q8WW36 166 aaKnown RBP13.2□□□□□ -0.3
VEGFA-207ENST00000413642 C8orf17Q9NRJ1 99 aa13.2□□□□□ -0.3
VEGFA-207ENST00000413642 A0A1W2PPM0 123 aa13.18□□□□□ -0.3
VEGFA-207ENST00000413642 Q8N9P0 234 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-207ENST00000413642 KRTAP9-8Q9BYQ0 159 aa13.15□□□□□ -0.3
VEGFA-207ENST00000413642 RBM12B-AS1Q9P1G2 102 aa13.15□□□□□ -0.3
VEGFA-207ENST00000413642 NREPQ16612 68 aa13.14□□□□□ -0.31
VEGFA-207ENST00000413642 H3BT86 120 aa13.12□□□□□ -0.31
VEGFA-207ENST00000413642 SPINK7P58062 85 aa13.1□□□□□ -0.31
VEGFA-207ENST00000413642 PRR15Q8IV56 129 aa13.1□□□□□ -0.31
VEGFA-207ENST00000413642 Q6ZVQ6 151 aa13.07□□□□□ -0.32
VEGFA-207ENST00000413642 MMP24-AS1A0A0U1RRL7 71 aa13.02□□□□□ -0.33
VEGFA-207ENST00000413642 SPCS1Q9Y6A9 102 aa13□□□□□ -0.33
VEGFA-207ENST00000413642 K7EQZ3 153 aa12.99□□□□□ -0.33
VEGFA-207ENST00000413642 MT2AP02795 61 aa12.97□□□□□ -0.33
VEGFA-207ENST00000413642 SMCPP49901 116 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-207ENST00000413642 TMEM254Q8TBM7 123 aa12.96□□□□□ -0.33
VEGFA-207ENST00000413642 MRPL34Q9BQ48 92 aaKnown RBP12.96□□□□□ -0.33
VEGFA-207ENST00000413642 BPY2O14599 106 aa12.91□□□□□ -0.34
VEGFA-207ENST00000413642 WFDC13Q8IUB5 93 aa12.91□□□□□ -0.34
VEGFA-207ENST00000413642 hDV103S1A0JD37 113 aa12.9□□□□□ -0.34
VEGFA-207ENST00000413642 MT1FP04733 61 aa12.88□□□□□ -0.35
VEGFA-207ENST00000413642 NDUFS5O43920 106 aa12.86□□□□□ -0.35
VEGFA-207ENST00000413642 COL5A1-AS1Q5SY13 56 aa12.86□□□□□ -0.35
VEGFA-207ENST00000413642 Q8N9L7 120 aa12.86□□□□□ -0.35
VEGFA-207ENST00000413642 PRO0461Q9UI25 63 aa12.84□□□□□ -0.35
VEGFA-207ENST00000413642 USH2AO75445 5202 aa12.79□□□□□ -0.36
VEGFA-207ENST00000413642 K7EP34 96 aa12.78□□□□□ -0.36
VEGFA-207ENST00000413642 KRTAP10-10P60014 251 aa12.78□□□□□ -0.36
VEGFA-207ENST00000413642 Q5W150 140 aa12.77□□□□□ -0.37
VEGFA-207ENST00000413642 LINC00846Q9NV44 126 aa12.74□□□□□ -0.37
VEGFA-207ENST00000413642 CASC2Q6XLA1 102 aa12.73□□□□□ -0.37
VEGFA-207ENST00000413642 KRTAP9-3Q9BYQ3 159 aa12.73□□□□□ -0.37
VEGFA-207ENST00000413642 IGKV2D-30A0A075B6S6 120 aa12.69□□□□□ -0.38
VEGFA-207ENST00000413642 LCE2BO14633 110 aa12.69□□□□□ -0.38
VEGFA-207ENST00000413642 IGKV2-30P06310 120 aa12.69□□□□□ -0.38
VEGFA-207ENST00000413642 HCG22E2RYF7 251 aa12.68□□□□□ -0.38
VEGFA-207ENST00000413642 SSPOA2VEC9 5147 aa12.67□□□□□ -0.38
VEGFA-207ENST00000413642 UBL5Q9BZL1 73 aa12.64□□□□□ -0.39
VEGFA-207ENST00000413642 PCP4L1A6NKN8 68 aa12.63□□□□□ -0.39
VEGFA-207ENST00000413642 H1FX-AS1Q4G0G2 97 aa12.61□□□□□ -0.39
VEGFA-207ENST00000413642 C7orf65Q6ZTY9 151 aa12.6□□□□□ -0.39
VEGFA-207ENST00000413642 GTF2H5Q6ZYL4 71 aa12.56□□□□□ -0.4
VEGFA-207ENST00000413642 CXCL6P80162 114 aa12.54□□□□□ -0.4
VEGFA-207ENST00000413642 ETDBQ3ZM63 59 aa12.51□□□□□ -0.41
VEGFA-207ENST00000413642 F8W1H4 67 aa12.5□□□□□ -0.41
VEGFA-207ENST00000413642 C4orf26Q17RF5 130 aa12.49□□□□□ -0.41
VEGFA-207ENST00000413642 KRTAP19-1Q8IUB9 90 aa12.45□□□□□ -0.42
VEGFA-207ENST00000413642 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-207ENST00000413642 FCGBPQ9Y6R7 5405 aaPredicted RBP12.35□□□□□ -0.43
VEGFA-207ENST00000413642 KRTAP3-1Q9BYR8 98 aa12.34□□□□□ -0.43
VEGFA-207ENST00000413642 TP53AIP1Q9HCN2 124 aa12.28□□□□□ -0.44
VEGFA-207ENST00000413642 C5orf47Q569G3 176 aa12.24□□□□□ -0.45
VEGFA-207ENST00000413642 C1orf64Q8NEQ6 169 aa12.23□□□□□ -0.45
VEGFA-207ENST00000413642 KRTAP9-7A8MTY7 169 aa12.21□□□□□ -0.45
VEGFA-207ENST00000413642 KRTAP19-6Q3LI70 58 aa12.19□□□□□ -0.46
VEGFA-207ENST00000413642 S4R3F8 94 aa12.16□□□□□ -0.46
VEGFA-207ENST00000413642 ACYP1P07311 99 aa12.14□□□□□ -0.47
VEGFA-207ENST00000413642 LCA10Q71F78 164 aa12.11□□□□□ -0.47
VEGFA-207ENST00000413642 CYP4F30PQ9H0H9 118 aa12.1□□□□□ -0.47
VEGFA-207ENST00000413642 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
VEGFA-207ENST00000413642 CSAG1Q6PB30 78 aa12.06□□□□□ -0.48
VEGFA-207ENST00000413642 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
VEGFA-207ENST00000413642 TRAV22A0A0B4J277 110 aa12.04□□□□□ -0.48
VEGFA-207ENST00000413642 ATP5EP2Q5VTU8 51 aa12.03□□□□□ -0.48
VEGFA-207ENST00000413642 FAM236AA0A1B0GUQ0 79 aa12.02□□□□□ -0.49
VEGFA-207ENST00000413642 FAM236BA0A1B0GV22 79 aa12.02□□□□□ -0.49
VEGFA-207ENST00000413642 A0A087WVE0 104 aa11.98□□□□□ -0.49
VEGFA-207ENST00000413642 LOC101927531A0A1B0GV80 90 aa11.98□□□□□ -0.49
VEGFA-207ENST00000413642 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
VEGFA-207ENST00000413642 MACF1Q9UPN3 7388 aaKnown RBP11.94□□□□□ -0.5
VEGFA-207ENST00000413642 A0A1B0GV90 55 aa11.92□□□□□ -0.5
VEGFA-207ENST00000413642 UQCRQO14949 82 aa11.92□□□□□ -0.5
VEGFA-207ENST00000413642 H0Y9P7 68 aa11.9□□□□□ -0.5
VEGFA-207ENST00000413642 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
VEGFA-207ENST00000413642 MT1BP07438 61 aa11.82□□□□□ -0.52
VEGFA-207ENST00000413642 SYNE2Q8WXH0 6885 aaKnown RBP11.82□□□□□ -0.52
VEGFA-207ENST00000413642 ATOX1O00244 68 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms