RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 NDUFB1O75438 58 aa9.78□□□□□ -0.84
PAX3-208ENST00000409828 LINC00313P59037 77 aa9.78□□□□□ -0.84
PAX3-208ENST00000409828 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
PAX3-208ENST00000409828 Q75L30 129 aa9.77□□□□□ -0.85
PAX3-208ENST00000409828 A0A1B0GV90 55 aa9.76□□□□□ -0.85
PAX3-208ENST00000409828 A8MWP4 228 aa9.76□□□□□ -0.85
PAX3-208ENST00000409828 C20orf166-AS1Q96NR2 134 aa9.75□□□□□ -0.85
PAX3-208ENST00000409828 DSCR10P59022 87 aa9.74□□□□□ -0.85
PAX3-208ENST00000409828 RNF213Q63HN8 5207 aa9.73□□□□□ -0.85
PAX3-208ENST00000409828 IGHV6-1A0A0B4J1U7 121 aa9.73□□□□□ -0.85
PAX3-208ENST00000409828 A8MUU9 505 aa9.73□□□□□ -0.85
PAX3-208ENST00000409828 Q6ZVQ6 151 aa9.72□□□□□ -0.85
PAX3-208ENST00000409828 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
PAX3-208ENST00000409828 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
PAX3-208ENST00000409828 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
PAX3-208ENST00000409828 LINC00846Q9NV44 126 aa9.7□□□□□ -0.86
PAX3-208ENST00000409828 MUC2Q02817 5179 aa9.7□□□□□ -0.86
PAX3-208ENST00000409828 IGKV3D-7A0A0C4DH55 119 aa9.69□□□□□ -0.86
PAX3-208ENST00000409828 NOTCH2NLQ7Z3S9 236 aa9.69□□□□□ -0.86
PAX3-208ENST00000409828 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
PAX3-208ENST00000409828 BPY2O14599 106 aa9.68□□□□□ -0.86
PAX3-208ENST00000409828 ATP11AUNQ6ZP68 121 aa9.66□□□□□ -0.86
PAX3-208ENST00000409828 ACYP1P07311 99 aa9.65□□□□□ -0.86
PAX3-208ENST00000409828 C8orf17Q9NRJ1 99 aa9.64□□□□□ -0.87
PAX3-208ENST00000409828 FAM240AA0A1B0GVK7 77 aa9.63□□□□□ -0.87
PAX3-208ENST00000409828 A0A0U1RQV1 116 aa9.61□□□□□ -0.87
PAX3-208ENST00000409828 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
PAX3-208ENST00000409828 K7EQZ3 153 aa9.6□□□□□ -0.87
PAX3-208ENST00000409828 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
PAX3-208ENST00000409828 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
PAX3-208ENST00000409828 CXCL6P80162 114 aa9.56□□□□□ -0.88
PAX3-208ENST00000409828 TMEM254Q8TBM7 123 aa9.55□□□□□ -0.88
PAX3-208ENST00000409828 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
PAX3-208ENST00000409828 MRPL34Q9BQ48 92 aaKnown RBP9.52□□□□□ -0.89
PAX3-208ENST00000409828 Q8N9L7 120 aa9.5□□□□□ -0.89
PAX3-208ENST00000409828 J3QR89 54 aa9.48□□□□□ -0.89
PAX3-208ENST00000409828 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
PAX3-208ENST00000409828 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
PAX3-208ENST00000409828 CASC2Q6XLA1 102 aa9.45□□□□□ -0.9
PAX3-208ENST00000409828 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
PAX3-208ENST00000409828 LINC00643Q86TS7 51 aa9.42□□□□□ -0.9
PAX3-208ENST00000409828 FAT4Q6V0I7 4981 aa9.42□□□□□ -0.9
PAX3-208ENST00000409828 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
PAX3-208ENST00000409828 KRTAP19-2Q3LHN2 52 aa9.38□□□□□ -0.91
PAX3-208ENST00000409828 NDUFS5O43920 106 aa9.36□□□□□ -0.91
PAX3-208ENST00000409828 LCE2CQ5TA81 110 aa9.33□□□□□ -0.92
PAX3-208ENST00000409828 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
PAX3-208ENST00000409828 K7ERU9 68 aa9.29□□□□□ -0.92
PAX3-208ENST00000409828 SPINK7P58062 85 aa9.29□□□□□ -0.92
PAX3-208ENST00000409828 TP53AIP1Q9HCN2 124 aa9.29□□□□□ -0.92
PAX3-208ENST00000409828 HRES1P13985 223 aa9.27□□□□□ -0.93
PAX3-208ENST00000409828 HIST1H4AP62805 103 aaKnown RBP9.27□□□□□ -0.93
PAX3-208ENST00000409828 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
PAX3-208ENST00000409828 Q5W150 140 aa9.26□□□□□ -0.93
PAX3-208ENST00000409828 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
PAX3-208ENST00000409828 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
PAX3-208ENST00000409828 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
PAX3-208ENST00000409828 MT1HP80294 61 aa9.18□□□□□ -0.94
PAX3-208ENST00000409828 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
PAX3-208ENST00000409828 A0A087WVE0 104 aa9.16□□□□□ -0.94
PAX3-208ENST00000409828 LCE2BO14633 110 aa9.15□□□□□ -0.94
PAX3-208ENST00000409828 IMUPQ9GZP8 106 aa9.14□□□□□ -0.95
PAX3-208ENST00000409828 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
PAX3-208ENST00000409828 IGKV2-30P06310 120 aa9.13□□□□□ -0.95
PAX3-208ENST00000409828 FAM236DA0A1B0GTK5 79 aa9.12□□□□□ -0.95
PAX3-208ENST00000409828 FAM236CP0DP71 79 aa9.12□□□□□ -0.95
PAX3-208ENST00000409828 UQCRQO14949 82 aa9.1□□□□□ -0.95
PAX3-208ENST00000409828 TRAV22A0A0B4J277 110 aa9.08□□□□□ -0.96
PAX3-208ENST00000409828 ATOX1O00244 68 aa9.03□□□□□ -0.96
PAX3-208ENST00000409828 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
PAX3-208ENST00000409828 LOC101927531A0A1B0GV80 90 aa9.02□□□□□ -0.97
PAX3-208ENST00000409828 M0R2T5 61 aa9.02□□□□□ -0.97
PAX3-208ENST00000409828 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
PAX3-208ENST00000409828 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
PAX3-208ENST00000409828 H0Y9P7 68 aa8.97□□□□□ -0.97
PAX3-208ENST00000409828 SCGB1A1P11684 91 aa8.96□□□□□ -0.98
PAX3-208ENST00000409828 KRTAP10-6P60371 365 aaPredicted RBP8.95□□□□□ -0.98
PAX3-208ENST00000409828 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
PAX3-208ENST00000409828 C5orf47Q569G3 176 aa8.95□□□□□ -0.98
PAX3-208ENST00000409828 LORP23490 312 aaPredicted RBP8.94□□□□□ -0.98
PAX3-208ENST00000409828 C4orf26Q17RF5 130 aa8.93□□□□□ -0.98
PAX3-208ENST00000409828 MP68P56378 58 aa8.92□□□□□ -0.98
PAX3-208ENST00000409828 H3BPC8 53 aa8.9□□□□□ -0.98
PAX3-208ENST00000409828 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
PAX3-208ENST00000409828 C1orf64Q8NEQ6 169 aa8.89□□□□□ -0.99
PAX3-208ENST00000409828 FAM236AA0A1B0GUQ0 79 aa8.87□□□□□ -0.99
PAX3-208ENST00000409828 FAM236BA0A1B0GV22 79 aa8.87□□□□□ -0.99
PAX3-208ENST00000409828 LINC00208Q96KT6 92 aa8.87□□□□□ -0.99
PAX3-208ENST00000409828 KRTAP3-1Q9BYR8 98 aa8.84□□□□□ -0.99
PAX3-208ENST00000409828 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
PAX3-208ENST00000409828 SVIPQ8NHG7 77 aa8.79□□□□□ -1
PAX3-208ENST00000409828 KRTAP9-8Q9BYQ0 159 aa8.77□□□□□ -1.01
PAX3-208ENST00000409828 KLKP1Q107X0 134 aa8.73□□□□□ -1.01
PAX3-208ENST00000409828 A8MUN3 132 aa8.72□□□□□ -1.01
PAX3-208ENST00000409828 S4R3F8 94 aa8.7□□□□□ -1.02
PAX3-208ENST00000409828 SERP2Q8N6R1 65 aa8.67□□□□□ -1.02
PAX3-208ENST00000409828 KRTAP9-2Q9BYQ4 174 aa8.67□□□□□ -1.02
PAX3-208ENST00000409828 MT2AP02795 61 aa8.66□□□□□ -1.02
PAX3-208ENST00000409828 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
PAX3-208ENST00000409828 LCA10Q71F78 164 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 220.2 ms