RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 A0A1B0GW54 56 aa16.4■□□□□ 0.22
TRAF3IP1-203ENST00000409739 SPCS1Q9Y6A9 102 aa16.4■□□□□ 0.22
TRAF3IP1-203ENST00000409739 NOTCH2NLQ7Z3S9 236 aa16.39■□□□□ 0.21
TRAF3IP1-203ENST00000409739 IGHV6-1A0A0B4J1U7 121 aa16.37■□□□□ 0.21
TRAF3IP1-203ENST00000409739 KRTAP16-1A8MUX0 517 aa16.37■□□□□ 0.21
TRAF3IP1-203ENST00000409739 LCE2CQ5TA81 110 aa16.37■□□□□ 0.21
TRAF3IP1-203ENST00000409739 J3KT08 172 aa16.34■□□□□ 0.21
TRAF3IP1-203ENST00000409739 A0A1B0GVX0 72 aa16.33■□□□□ 0.2
TRAF3IP1-203ENST00000409739 C8orf87E5RJ46 101 aa16.27■□□□□ 0.2
TRAF3IP1-203ENST00000409739 PCP4L1A6NKN8 68 aa16.26■□□□□ 0.19
TRAF3IP1-203ENST00000409739 SMCPP49901 116 aaPredicted RBP16.22■□□□□ 0.19
TRAF3IP1-203ENST00000409739 K7EP34 96 aa16.2■□□□□ 0.18
TRAF3IP1-203ENST00000409739 NDUFB1O75438 58 aa16.18■□□□□ 0.18
TRAF3IP1-203ENST00000409739 A8MWP4 228 aa16.17■□□□□ 0.18
TRAF3IP1-203ENST00000409739 NREPQ16612 68 aa16.17■□□□□ 0.18
TRAF3IP1-203ENST00000409739 PRO0461Q9UI25 63 aa16.16■□□□□ 0.18
TRAF3IP1-203ENST00000409739 MT1HP80294 61 aa16.14■□□□□ 0.17
TRAF3IP1-203ENST00000409739 KRTAP9-2Q9BYQ4 174 aa16.13■□□□□ 0.17
TRAF3IP1-203ENST00000409739 IGKV3D-7A0A0C4DH55 119 aa16.12■□□□□ 0.17
TRAF3IP1-203ENST00000409739 COX6B2Q6YFQ2 88 aa16.1■□□□□ 0.17
TRAF3IP1-203ENST00000409739 C8orf17Q9NRJ1 99 aa16.08■□□□□ 0.16
TRAF3IP1-203ENST00000409739 PRR15Q8IV56 129 aa16.04■□□□□ 0.16
TRAF3IP1-203ENST00000409739 GTF2H5Q6ZYL4 71 aa16.01■□□□□ 0.15
TRAF3IP1-203ENST00000409739 Q8N9P0 234 aaPredicted RBP15.98■□□□□ 0.15
TRAF3IP1-203ENST00000409739 FLGP20930 4061 aaPredicted RBP15.96■□□□□ 0.15
TRAF3IP1-203ENST00000409739 Q6ZVQ6 151 aa15.95■□□□□ 0.14
TRAF3IP1-203ENST00000409739 K7EQZ3 153 aa15.94■□□□□ 0.14
TRAF3IP1-203ENST00000409739 ZCCHC13Q8WW36 166 aaKnown RBP15.94■□□□□ 0.14
TRAF3IP1-203ENST00000409739 MMP24-AS1A0A0U1RRL7 71 aa15.92■□□□□ 0.14
TRAF3IP1-203ENST00000409739 BPY2O14599 106 aa15.92■□□□□ 0.14
TRAF3IP1-203ENST00000409739 F8W1H4 67 aa15.86■□□□□ 0.13
TRAF3IP1-203ENST00000409739 TMEM254Q8TBM7 123 aa15.85■□□□□ 0.13
TRAF3IP1-203ENST00000409739 LINC00846Q9NV44 126 aa15.83■□□□□ 0.12
TRAF3IP1-203ENST00000409739 M0R2T5 61 aa15.82■□□□□ 0.12
TRAF3IP1-203ENST00000409739 HRES1P13985 223 aa15.82■□□□□ 0.12
TRAF3IP1-203ENST00000409739 MRPL34Q9BQ48 92 aaKnown RBP15.82■□□□□ 0.12
TRAF3IP1-203ENST00000409739 hDV103S1A0JD37 113 aa15.8■□□□□ 0.12
TRAF3IP1-203ENST00000409739 ETDBQ3ZM63 59 aa15.79■□□□□ 0.12
TRAF3IP1-203ENST00000409739 KRTAP10-6P60371 365 aaPredicted RBP15.77■□□□□ 0.12
TRAF3IP1-203ENST00000409739 Q8N9L7 120 aa15.77■□□□□ 0.12
TRAF3IP1-203ENST00000409739 UBL5Q9BZL1 73 aa15.77■□□□□ 0.12
TRAF3IP1-203ENST00000409739 KRTAP9-6A0A140TA67 174 aa15.76■□□□□ 0.11
TRAF3IP1-203ENST00000409739 MPLKIPQ8TAP9 179 aa15.76■□□□□ 0.11
TRAF3IP1-203ENST00000409739 LORP23490 312 aaPredicted RBP15.75■□□□□ 0.11
TRAF3IP1-203ENST00000409739 SPINK7P58062 85 aa15.71■□□□□ 0.11
TRAF3IP1-203ENST00000409739 RBM12B-AS1Q9P1G2 102 aa15.7■□□□□ 0.1
TRAF3IP1-203ENST00000409739 FAM236DA0A1B0GTK5 79 aa15.69■□□□□ 0.1
TRAF3IP1-203ENST00000409739 FAM236CP0DP71 79 aa15.69■□□□□ 0.1
TRAF3IP1-203ENST00000409739 NDUFS5O43920 106 aa15.66■□□□□ 0.1
TRAF3IP1-203ENST00000409739 WFDC13Q8IUB5 93 aa15.66■□□□□ 0.1
TRAF3IP1-203ENST00000409739 CASC2Q6XLA1 102 aa15.63■□□□□ 0.09
TRAF3IP1-203ENST00000409739 LCE2DQ5TA82 110 aaPredicted RBP15.58■□□□□ 0.08
TRAF3IP1-203ENST00000409739 HCG22E2RYF7 251 aa15.51■□□□□ 0.07
TRAF3IP1-203ENST00000409739 Q5W150 140 aa15.49■□□□□ 0.07
TRAF3IP1-203ENST00000409739 CXCL6P80162 114 aa15.48■□□□□ 0.07
TRAF3IP1-203ENST00000409739 A0A1B0GV90 55 aa15.4■□□□□ 0.06
TRAF3IP1-203ENST00000409739 ACYP1P07311 99 aa15.39■□□□□ 0.05
TRAF3IP1-203ENST00000409739 IGKV2D-30A0A075B6S6 120 aa15.37■□□□□ 0.05
TRAF3IP1-203ENST00000409739 FAM240AA0A1B0GVK7 77 aa15.37■□□□□ 0.05
TRAF3IP1-203ENST00000409739 IGKV2-30P06310 120 aa15.37■□□□□ 0.05
TRAF3IP1-203ENST00000409739 C7orf65Q6ZTY9 151 aa15.35■□□□□ 0.05
TRAF3IP1-203ENST00000409739 KRTAP9-8Q9BYQ0 159 aa15.32■□□□□ 0.04
TRAF3IP1-203ENST00000409739 FSIP2Q5CZC0 6907 aa15.26■□□□□ 0.03
TRAF3IP1-203ENST00000409739 ATP5EP2Q5VTU8 51 aa15.21■□□□□ 0.03
TRAF3IP1-203ENST00000409739 TP53AIP1Q9HCN2 124 aa15.18■□□□□ 0.02
TRAF3IP1-203ENST00000409739 CRCT1Q9UGL9 99 aa15.17■□□□□ 0.02
TRAF3IP1-203ENST00000409739 MT2AP02795 61 aa15.14■□□□□ 0.01
TRAF3IP1-203ENST00000409739 H1FX-AS1Q4G0G2 97 aa15.12■□□□□ 0.01
TRAF3IP1-203ENST00000409739 HIST1H4AP62805 103 aaKnown RBP15.07■□□□□ 0
TRAF3IP1-203ENST00000409739 C4orf26Q17RF5 130 aa15.07■□□□□ 0
TRAF3IP1-203ENST00000409739 LINC00643Q86TS7 51 aa15.05■□□□□ -0
TRAF3IP1-203ENST00000409739 MT1FP04733 61 aa15.04■□□□□ -0
TRAF3IP1-203ENST00000409739 KRTAP10-10P60014 251 aa14.94□□□□□ -0.02
TRAF3IP1-203ENST00000409739 A0A087WVE0 104 aa14.93□□□□□ -0.02
TRAF3IP1-203ENST00000409739 TRAV22A0A0B4J277 110 aa14.92□□□□□ -0.02
TRAF3IP1-203ENST00000409739 J3QR89 54 aa14.87□□□□□ -0.03
TRAF3IP1-203ENST00000409739 KRTAP3-1Q9BYR8 98 aa14.86□□□□□ -0.03
TRAF3IP1-203ENST00000409739 CYP4F30PQ9H0H9 118 aa14.84□□□□□ -0.03
TRAF3IP1-203ENST00000409739 KRTAP9-3Q9BYQ3 159 aa14.83□□□□□ -0.04
TRAF3IP1-203ENST00000409739 UQCRQO14949 82 aa14.82□□□□□ -0.04
TRAF3IP1-203ENST00000409739 C1orf64Q8NEQ6 169 aa14.82□□□□□ -0.04
TRAF3IP1-203ENST00000409739 LOC101927531A0A1B0GV80 90 aa14.79□□□□□ -0.04
TRAF3IP1-203ENST00000409739 H0Y9P7 68 aa14.74□□□□□ -0.05
TRAF3IP1-203ENST00000409739 ATOX1O00244 68 aa14.7□□□□□ -0.06
TRAF3IP1-203ENST00000409739 LCE2BO14633 110 aa14.69□□□□□ -0.06
TRAF3IP1-203ENST00000409739 S4R3F8 94 aa14.69□□□□□ -0.06
TRAF3IP1-203ENST00000409739 C5orf47Q569G3 176 aa14.63□□□□□ -0.07
TRAF3IP1-203ENST00000409739 OCR1Q9BZK8 76 aa14.63□□□□□ -0.07
TRAF3IP1-203ENST00000409739 USH2AO75445 5202 aa14.61□□□□□ -0.07
TRAF3IP1-203ENST00000409739 LCA10Q71F78 164 aa14.6□□□□□ -0.07
TRAF3IP1-203ENST00000409739 LINC00208Q96KT6 92 aa14.53□□□□□ -0.08
TRAF3IP1-203ENST00000409739 CSAG1Q6PB30 78 aa14.5□□□□□ -0.09
TRAF3IP1-203ENST00000409739 MP68P56378 58 aa14.48□□□□□ -0.09
TRAF3IP1-203ENST00000409739 K7ERU9 68 aa14.46□□□□□ -0.09
TRAF3IP1-203ENST00000409739 KRTAP3-3Q9BYR6 98 aa14.43□□□□□ -0.1
TRAF3IP1-203ENST00000409739 KLKP1Q107X0 134 aa14.42□□□□□ -0.1
TRAF3IP1-203ENST00000409739 SSPOA2VEC9 5147 aa14.41□□□□□ -0.1
TRAF3IP1-203ENST00000409739 SCGB1A1P11684 91 aa14.39□□□□□ -0.11
TRAF3IP1-203ENST00000409739 MT-ATP8P03928 68 aa14.38□□□□□ -0.11
TRAF3IP1-203ENST00000409739 IMUPQ9GZP8 106 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms