RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 BAALC-AS2P0C853 105 aa11.21□□□□□ -0.61
KDELR3-202ENST00000409006 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
KDELR3-202ENST00000409006 MT2AP02795 61 aa11.19□□□□□ -0.62
KDELR3-202ENST00000409006 RBM12B-AS1Q9P1G2 102 aa11.18□□□□□ -0.62
KDELR3-202ENST00000409006 C9JAW5 83 aa11.16□□□□□ -0.62
KDELR3-202ENST00000409006 Q6ZQT0 140 aa11.14□□□□□ -0.63
KDELR3-202ENST00000409006 NAA38Q9BRA0 125 aaKnown RBP11.13□□□□□ -0.63
KDELR3-202ENST00000409006 MT1FP04733 61 aa11.12□□□□□ -0.63
KDELR3-202ENST00000409006 USH2AO75445 5202 aa11.12□□□□□ -0.63
KDELR3-202ENST00000409006 ZCCHC13Q8WW36 166 aaKnown RBP11.11□□□□□ -0.63
KDELR3-202ENST00000409006 J3KT08 172 aa11.1□□□□□ -0.63
KDELR3-202ENST00000409006 SSPOA2VEC9 5147 aa11.07□□□□□ -0.64
KDELR3-202ENST00000409006 SPINK7P58062 85 aa11.06□□□□□ -0.64
KDELR3-202ENST00000409006 C21orf62-AS1Q17RA5 79 aa11.06□□□□□ -0.64
KDELR3-202ENST00000409006 ATXN8Q156A1 80 aa11.05□□□□□ -0.64
KDELR3-202ENST00000409006 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
KDELR3-202ENST00000409006 LCE2BO14633 110 aa11.03□□□□□ -0.64
KDELR3-202ENST00000409006 LOC110117498A0A087WWA1 95 aa11.02□□□□□ -0.65
KDELR3-202ENST00000409006 NDUFB1O75438 58 aa11.02□□□□□ -0.65
KDELR3-202ENST00000409006 KRTAP9-3Q9BYQ3 159 aa11.02□□□□□ -0.65
KDELR3-202ENST00000409006 JMJD7-PLA2G4BH0Y9G9 81 aa11.01□□□□□ -0.65
KDELR3-202ENST00000409006 M0R143 59 aa11.01□□□□□ -0.65
KDELR3-202ENST00000409006 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
KDELR3-202ENST00000409006 IGKV3D-7A0A0C4DH55 119 aa11□□□□□ -0.65
KDELR3-202ENST00000409006 A8MWP4 228 aa11□□□□□ -0.65
KDELR3-202ENST00000409006 KRTAP10-10P60014 251 aa11□□□□□ -0.65
KDELR3-202ENST00000409006 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.99□□□□□ -0.65
KDELR3-202ENST00000409006 C14orf132Q9NPU4 83 aa10.98□□□□□ -0.65
KDELR3-202ENST00000409006 MTURNQ8N3F0 131 aa10.97□□□□□ -0.65
KDELR3-202ENST00000409006 A0A1B0GW54 56 aa10.95□□□□□ -0.66
KDELR3-202ENST00000409006 PDE6GP18545 87 aa10.92□□□□□ -0.66
KDELR3-202ENST00000409006 LYRM7Q5U5X0 104 aa10.91□□□□□ -0.66
KDELR3-202ENST00000409006 Q6ZVQ6 151 aa10.91□□□□□ -0.66
KDELR3-202ENST00000409006 WFDC13Q8IUB5 93 aa10.9□□□□□ -0.66
KDELR3-202ENST00000409006 KRTAP9-7A8MTY7 169 aa10.89□□□□□ -0.67
KDELR3-202ENST00000409006 KRTAP19-1Q8IUB9 90 aa10.89□□□□□ -0.67
KDELR3-202ENST00000409006 PRR15Q8IV56 129 aa10.89□□□□□ -0.67
KDELR3-202ENST00000409006 NREPQ16612 68 aa10.85□□□□□ -0.67
KDELR3-202ENST00000409006 MMP24-AS1A0A0U1RRL7 71 aa10.84□□□□□ -0.67
KDELR3-202ENST00000409006 SMIM6P0DI80 62 aa10.84□□□□□ -0.67
KDELR3-202ENST00000409006 FCGBPQ9Y6R7 5405 aaPredicted RBP10.82□□□□□ -0.68
KDELR3-202ENST00000409006 BATFQ16520 125 aa10.81□□□□□ -0.68
KDELR3-202ENST00000409006 TMEM254Q8TBM7 123 aa10.81□□□□□ -0.68
KDELR3-202ENST00000409006 MRPL34Q9BQ48 92 aaKnown RBP10.81□□□□□ -0.68
KDELR3-202ENST00000409006 K7EQZ3 153 aa10.78□□□□□ -0.68
KDELR3-202ENST00000409006 hDV103S1A0JD37 113 aa10.74□□□□□ -0.69
KDELR3-202ENST00000409006 TSTD3H0UI37 97 aa10.73□□□□□ -0.69
KDELR3-202ENST00000409006 C9orf118A6NHY6 69 aa10.72□□□□□ -0.69
KDELR3-202ENST00000409006 H3BT86 120 aa10.71□□□□□ -0.69
KDELR3-202ENST00000409006 NDUFS5O43920 106 aa10.71□□□□□ -0.69
KDELR3-202ENST00000409006 TAX1BP3O14907 124 aa10.7□□□□□ -0.7
KDELR3-202ENST00000409006 A0A1W2PPM0 123 aa10.67□□□□□ -0.7
KDELR3-202ENST00000409006 H1FX-AS1Q4G0G2 97 aa10.67□□□□□ -0.7
KDELR3-202ENST00000409006 Q5W150 140 aa10.67□□□□□ -0.7
KDELR3-202ENST00000409006 BPY2O14599 106 aa10.64□□□□□ -0.71
KDELR3-202ENST00000409006 IGKV2D-30A0A075B6S6 120 aa10.63□□□□□ -0.71
KDELR3-202ENST00000409006 IGKV2-30P06310 120 aa10.63□□□□□ -0.71
KDELR3-202ENST00000409006 KRTAP19-6Q3LI70 58 aa10.63□□□□□ -0.71
KDELR3-202ENST00000409006 Q8N9L7 120 aa10.62□□□□□ -0.71
KDELR3-202ENST00000409006 LOC105371267A0A1B0GV96 52 aa10.57□□□□□ -0.72
KDELR3-202ENST00000409006 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
KDELR3-202ENST00000409006 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
KDELR3-202ENST00000409006 CASC2Q6XLA1 102 aa10.54□□□□□ -0.72
KDELR3-202ENST00000409006 MACF1Q9UPN3 7388 aaKnown RBP10.54□□□□□ -0.72
KDELR3-202ENST00000409006 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
KDELR3-202ENST00000409006 SPCS1Q9Y6A9 102 aa10.51□□□□□ -0.73
KDELR3-202ENST00000409006 LINC00846Q9NV44 126 aa10.5□□□□□ -0.73
KDELR3-202ENST00000409006 C4orf26Q17RF5 130 aa10.48□□□□□ -0.73
KDELR3-202ENST00000409006 SYNE2Q8WXH0 6885 aaKnown RBP10.46□□□□□ -0.74
KDELR3-202ENST00000409006 CXCL6P80162 114 aa10.42□□□□□ -0.74
KDELR3-202ENST00000409006 PRO0461Q9UI25 63 aa10.4□□□□□ -0.74
KDELR3-202ENST00000409006 KRTAP3-1Q9BYR8 98 aa10.37□□□□□ -0.75
KDELR3-202ENST00000409006 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
KDELR3-202ENST00000409006 C5orf47Q569G3 176 aa10.33□□□□□ -0.76
KDELR3-202ENST00000409006 K7EP34 96 aa10.29□□□□□ -0.76
KDELR3-202ENST00000409006 COL5A1-AS1Q5SY13 56 aa10.29□□□□□ -0.76
KDELR3-202ENST00000409006 C1orf64Q8NEQ6 169 aa10.24□□□□□ -0.77
KDELR3-202ENST00000409006 S4R3F8 94 aa10.24□□□□□ -0.77
KDELR3-202ENST00000409006 FAM236AA0A1B0GUQ0 79 aa10.21□□□□□ -0.77
KDELR3-202ENST00000409006 FAM236BA0A1B0GV22 79 aa10.21□□□□□ -0.77
KDELR3-202ENST00000409006 LCA10Q71F78 164 aa10.21□□□□□ -0.77
KDELR3-202ENST00000409006 KRTAP6-3Q3LI67 103 aa10.19□□□□□ -0.78
KDELR3-202ENST00000409006 CSAG1Q6PB30 78 aa10.17□□□□□ -0.78
KDELR3-202ENST00000409006 MT1BP07438 61 aa10.16□□□□□ -0.78
KDELR3-202ENST00000409006 TP53AIP1Q9HCN2 124 aa10.15□□□□□ -0.78
KDELR3-202ENST00000409006 SPRR2GQ9BYE4 73 aa10.11□□□□□ -0.79
KDELR3-202ENST00000409006 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
KDELR3-202ENST00000409006 GTF2H5Q6ZYL4 71 aa10.09□□□□□ -0.79
KDELR3-202ENST00000409006 KRTAP19-8Q3LI54 63 aa10.08□□□□□ -0.8
KDELR3-202ENST00000409006 F8W1H4 67 aa10.07□□□□□ -0.8
KDELR3-202ENST00000409006 Q5VV11 94 aa10.06□□□□□ -0.8
KDELR3-202ENST00000409006 A6NN06 94 aa10.05□□□□□ -0.8
KDELR3-202ENST00000409006 CYP4F30PQ9H0H9 118 aa10.05□□□□□ -0.8
KDELR3-202ENST00000409006 A0A087WVE0 104 aa10.03□□□□□ -0.8
KDELR3-202ENST00000409006 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
KDELR3-202ENST00000409006 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
KDELR3-202ENST00000409006 PCP4L1A6NKN8 68 aa9.94□□□□□ -0.82
KDELR3-202ENST00000409006 KRTAP10-5P60370 271 aa9.93□□□□□ -0.82
KDELR3-202ENST00000409006 LOC101927531A0A1B0GV80 90 aa9.9□□□□□ -0.82
KDELR3-202ENST00000409006 LOC100996750A0A140TA64 210 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms