RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
SPTLC1P3-201ENST00000403408 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
SPTLC1P3-201ENST00000403408 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
SPTLC1P3-201ENST00000403408 COA6Q5JTJ3 125 aaKnown RBP5.43□□□□□ -1.54
SPTLC1P3-201ENST00000403408 TRBV7-4A0A0J9YYF1 115 aa5.41□□□□□ -1.54
SPTLC1P3-201ENST00000403408 A0A1B0GV72 72 aa5.4□□□□□ -1.54
SPTLC1P3-201ENST00000403408 A0A1B0GVX0 72 aa5.4□□□□□ -1.54
SPTLC1P3-201ENST00000403408 FABP2P12104 132 aa5.4□□□□□ -1.54
SPTLC1P3-201ENST00000403408 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
SPTLC1P3-201ENST00000403408 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
SPTLC1P3-201ENST00000403408 RAB37Q96AX2 223 aa5.38□□□□□ -1.55
SPTLC1P3-201ENST00000403408 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
SPTLC1P3-201ENST00000403408 ANKRD29Q8N6D5 301 aa5.37□□□□□ -1.55
SPTLC1P3-201ENST00000403408 H0YGX0 51 aa5.36□□□□□ -1.55
SPTLC1P3-201ENST00000403408 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
SPTLC1P3-201ENST00000403408 SNRPEP62304 92 aaKnown RBP5.35□□□□□ -1.55
SPTLC1P3-201ENST00000403408 HIST1H4GQ99525 98 aa5.35□□□□□ -1.55
SPTLC1P3-201ENST00000403408 CCKP06307 115 aa5.32□□□□□ -1.56
SPTLC1P3-201ENST00000403408 Q5VV11 94 aa5.32□□□□□ -1.56
SPTLC1P3-201ENST00000403408 A0A1B0GX51 115 aa5.31□□□□□ -1.56
SPTLC1P3-201ENST00000403408 TRACP01848 142 aa5.3□□□□□ -1.56
SPTLC1P3-201ENST00000403408 SPRR2GQ9BYE4 73 aa5.3□□□□□ -1.56
SPTLC1P3-201ENST00000403408 A0A0B4J2C4 111 aa5.29□□□□□ -1.56
SPTLC1P3-201ENST00000403408 SNCGO76070 127 aa5.29□□□□□ -1.56
SPTLC1P3-201ENST00000403408 TRIAP1O43715 76 aa5.27□□□□□ -1.57
SPTLC1P3-201ENST00000403408 COX8AP10176 69 aa5.26□□□□□ -1.57
SPTLC1P3-201ENST00000403408 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
SPTLC1P3-201ENST00000403408 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
SPTLC1P3-201ENST00000403408 SPRR2EP22531 72 aa5.25□□□□□ -1.57
SPTLC1P3-201ENST00000403408 SPRR2BP35325 72 aa5.25□□□□□ -1.57
SPTLC1P3-201ENST00000403408 SPRR2AP35326 72 aa5.25□□□□□ -1.57
SPTLC1P3-201ENST00000403408 HIST1H2BLQ99880 126 aa5.25□□□□□ -1.57
SPTLC1P3-201ENST00000403408 HSBP1L1C9JCN9 74 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 HIST3H2BBQ8N257 126 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 VPS25Q9BRG1 176 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 ORMDL1Q9P0S3 153 aa5.24□□□□□ -1.57
SPTLC1P3-201ENST00000403408 LYRM7Q5U5X0 104 aa5.23□□□□□ -1.57
SPTLC1P3-201ENST00000403408 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
SPTLC1P3-201ENST00000403408 DLEU1O43261 78 aa5.22□□□□□ -1.57
SPTLC1P3-201ENST00000403408 C2orf91Q6ZV80 131 aa5.22□□□□□ -1.57
SPTLC1P3-201ENST00000403408 J3KT08 172 aa5.21□□□□□ -1.58
SPTLC1P3-201ENST00000403408 CEND1Q8N111 149 aa5.21□□□□□ -1.58
SPTLC1P3-201ENST00000403408 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
SPTLC1P3-201ENST00000403408 C5orf47Q569G3 176 aa5.2□□□□□ -1.58
SPTLC1P3-201ENST00000403408 Q6ZVQ6 151 aa5.2□□□□□ -1.58
SPTLC1P3-201ENST00000403408 C14orf144Q96I85 54 aa5.2□□□□□ -1.58
SPTLC1P3-201ENST00000403408 GPR98Q8WXG9 6306 aa5.19□□□□□ -1.58
SPTLC1P3-201ENST00000403408 FAM236AA0A1B0GUQ0 79 aa5.19□□□□□ -1.58
SPTLC1P3-201ENST00000403408 FAM236BA0A1B0GV22 79 aa5.19□□□□□ -1.58
SPTLC1P3-201ENST00000403408 TMEM256-PLSCR3K7ERE1 68 aa5.19□□□□□ -1.58
SPTLC1P3-201ENST00000403408 FXYD2P54710 66 aa5.19□□□□□ -1.58
SPTLC1P3-201ENST00000403408 Q6ZQT0 140 aa5.19□□□□□ -1.58
SPTLC1P3-201ENST00000403408 UBE2V1Q13404 147 aa5.18□□□□□ -1.58
SPTLC1P3-201ENST00000403408 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
SPTLC1P3-201ENST00000403408 HIGD1BQ9P298 99 aa5.18□□□□□ -1.58
SPTLC1P3-201ENST00000403408 DNAL4O96015 105 aa5.17□□□□□ -1.58
SPTLC1P3-201ENST00000403408 NDUFB1O75438 58 aa5.16□□□□□ -1.58
SPTLC1P3-201ENST00000403408 Q5W150 140 aa5.16□□□□□ -1.58
SPTLC1P3-201ENST00000403408 MMP24-AS1A0A0U1RRL7 71 aa5.15□□□□□ -1.59
SPTLC1P3-201ENST00000403408 H3BQ85 93 aa5.15□□□□□ -1.59
SPTLC1P3-201ENST00000403408 RBM3P98179 157 aaKnown RBP5.15□□□□□ -1.59
SPTLC1P3-201ENST00000403408 DSCR8Q96T75 97 aa5.15□□□□□ -1.59
SPTLC1P3-201ENST00000403408 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
SPTLC1P3-201ENST00000403408 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
SPTLC1P3-201ENST00000403408 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
SPTLC1P3-201ENST00000403408 K7ERJ3 54 aa5.13□□□□□ -1.59
SPTLC1P3-201ENST00000403408 PRR15Q8IV56 129 aa5.12□□□□□ -1.59
SPTLC1P3-201ENST00000403408 MRPL34Q9BQ48 92 aaKnown RBP5.12□□□□□ -1.59
SPTLC1P3-201ENST00000403408 S100A2P29034 98 aa5.11□□□□□ -1.59
SPTLC1P3-201ENST00000403408 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
SPTLC1P3-201ENST00000403408 KLKP1Q107X0 134 aa5.09□□□□□ -1.59
SPTLC1P3-201ENST00000403408 PAM16Q9Y3D7 125 aa5.09□□□□□ -1.59
SPTLC1P3-201ENST00000403408 C9JAW5 83 aa5.08□□□□□ -1.6
SPTLC1P3-201ENST00000403408 PSMB2P49721 201 aa5.08□□□□□ -1.6
SPTLC1P3-201ENST00000403408 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
SPTLC1P3-201ENST00000403408 SPRR2DP22532 72 aa5.07□□□□□ -1.6
SPTLC1P3-201ENST00000403408 SPATA45Q537H7 98 aa5.07□□□□□ -1.6
SPTLC1P3-201ENST00000403408 LCA10Q71F78 164 aa5.07□□□□□ -1.6
SPTLC1P3-201ENST00000403408 IMUPQ9GZP8 106 aa5.07□□□□□ -1.6
SPTLC1P3-201ENST00000403408 hDV103S1A0JD37 113 aa5.04□□□□□ -1.6
SPTLC1P3-201ENST00000403408 NDUFS5O43920 106 aa5.04□□□□□ -1.6
SPTLC1P3-201ENST00000403408 C21orf62-AS1Q17RA5 79 aa5.04□□□□□ -1.6
SPTLC1P3-201ENST00000403408 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
SPTLC1P3-201ENST00000403408 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
SPTLC1P3-201ENST00000403408 S4R3F8 94 aa5.04□□□□□ -1.6
SPTLC1P3-201ENST00000403408 C9orf118A6NHY6 69 aa5.03□□□□□ -1.6
SPTLC1P3-201ENST00000403408 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
SPTLC1P3-201ENST00000403408 MT1XP80297 61 aa5.03□□□□□ -1.6
SPTLC1P3-201ENST00000403408 K7EQZ3 153 aa5.02□□□□□ -1.61
SPTLC1P3-201ENST00000403408 COX6CP09669 75 aa5.01□□□□□ -1.61
SPTLC1P3-201ENST00000403408 LOC110117498A0A087WWA1 95 aa4.99□□□□□ -1.61
SPTLC1P3-201ENST00000403408 VAMP8Q9BV40 100 aa4.97□□□□□ -1.61
SPTLC1P3-201ENST00000403408 A0A1B0GW54 56 aa4.96□□□□□ -1.62
SPTLC1P3-201ENST00000403408 S100A6P06703 90 aa4.95□□□□□ -1.62
SPTLC1P3-201ENST00000403408 HSD52Q0P140 79 aa4.95□□□□□ -1.62
SPTLC1P3-201ENST00000403408 NREPQ16612 68 aa4.95□□□□□ -1.62
SPTLC1P3-201ENST00000403408 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms