RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
UFD1-202ENST00000399523 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
UFD1-202ENST00000399523 KRTAP2-2Q9BYT5 123 aa8.06□□□□□ -1.12
UFD1-202ENST00000399523 KRTAP2-1Q9BYU5 128 aa8.06□□□□□ -1.12
UFD1-202ENST00000399523 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
UFD1-202ENST00000399523 HSBP1L1C9JCN9 74 aa8.05□□□□□ -1.12
UFD1-202ENST00000399523 DSCR8Q96T75 97 aa8.05□□□□□ -1.12
UFD1-202ENST00000399523 J3KT08 172 aa8.04□□□□□ -1.12
UFD1-202ENST00000399523 A0A0B4J2C4 111 aa8.03□□□□□ -1.12
UFD1-202ENST00000399523 H3BQ85 93 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2EP22531 72 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2BP35325 72 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2AP35326 72 aa8.02□□□□□ -1.13
UFD1-202ENST00000399523 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
UFD1-202ENST00000399523 FAM236AA0A1B0GUQ0 79 aa8□□□□□ -1.13
UFD1-202ENST00000399523 FAM236BA0A1B0GV22 79 aa8□□□□□ -1.13
UFD1-202ENST00000399523 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
UFD1-202ENST00000399523 TMEM256-PLSCR3K7ERE1 68 aa7.98□□□□□ -1.13
UFD1-202ENST00000399523 NDUFB1O75438 58 aa7.98□□□□□ -1.13
UFD1-202ENST00000399523 SPRR2FQ96RM1 72 aa7.98□□□□□ -1.13
UFD1-202ENST00000399523 VPS25Q9BRG1 176 aa7.96□□□□□ -1.14
UFD1-202ENST00000399523 DNAL4O96015 105 aa7.95□□□□□ -1.14
UFD1-202ENST00000399523 TRIAP1O43715 76 aa7.93□□□□□ -1.14
UFD1-202ENST00000399523 COX8AP10176 69 aa7.93□□□□□ -1.14
UFD1-202ENST00000399523 Q6ZVQ6 151 aa7.93□□□□□ -1.14
UFD1-202ENST00000399523 UBE2V1Q13404 147 aa7.92□□□□□ -1.14
UFD1-202ENST00000399523 PRO1854Q9UHT4 67 aa7.92□□□□□ -1.14
UFD1-202ENST00000399523 DLEU1O43261 78 aa7.91□□□□□ -1.14
UFD1-202ENST00000399523 C5orf47Q569G3 176 aa7.9□□□□□ -1.14
UFD1-202ENST00000399523 C21orf62-AS1Q17RA5 79 aa7.89□□□□□ -1.15
UFD1-202ENST00000399523 Q6ZQT0 140 aa7.89□□□□□ -1.15
UFD1-202ENST00000399523 C2orf91Q6ZV80 131 aa7.88□□□□□ -1.15
UFD1-202ENST00000399523 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
UFD1-202ENST00000399523 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
UFD1-202ENST00000399523 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
UFD1-202ENST00000399523 LCE1AQ5T7P2 110 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 HIGD1BQ9P298 99 aa7.86□□□□□ -1.15
UFD1-202ENST00000399523 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
UFD1-202ENST00000399523 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
UFD1-202ENST00000399523 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
UFD1-202ENST00000399523 SMCPP49901 116 aaPredicted RBP7.82□□□□□ -1.16
UFD1-202ENST00000399523 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
UFD1-202ENST00000399523 CEND1Q8N111 149 aa7.81□□□□□ -1.16
UFD1-202ENST00000399523 MRPL34Q9BQ48 92 aaKnown RBP7.81□□□□□ -1.16
UFD1-202ENST00000399523 TMEM254Q8TBM7 123 aa7.8□□□□□ -1.16
UFD1-202ENST00000399523 TMEM238LA0A1B0GVL6 79 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 A6NJY4 79 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
UFD1-202ENST00000399523 TMA7Q9Y2S6 64 aaKnown RBP7.79□□□□□ -1.16
UFD1-202ENST00000399523 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
UFD1-202ENST00000399523 C14orf144Q96I85 54 aa7.78□□□□□ -1.16
UFD1-202ENST00000399523 C9JAW5 83 aa7.77□□□□□ -1.17
UFD1-202ENST00000399523 SPRR2DP22532 72 aa7.77□□□□□ -1.17
UFD1-202ENST00000399523 S100A2P29034 98 aa7.77□□□□□ -1.17
UFD1-202ENST00000399523 GPR98Q8WXG9 6306 aa7.76□□□□□ -1.17
UFD1-202ENST00000399523 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
UFD1-202ENST00000399523 PSMB2P49721 201 aa7.75□□□□□ -1.17
UFD1-202ENST00000399523 FXYD2P54710 66 aa7.75□□□□□ -1.17
UFD1-202ENST00000399523 Q5W150 140 aa7.74□□□□□ -1.17
UFD1-202ENST00000399523 COX6CP09669 75 aa7.73□□□□□ -1.17
UFD1-202ENST00000399523 NDUFS5O43920 106 aa7.72□□□□□ -1.17
UFD1-202ENST00000399523 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
UFD1-202ENST00000399523 S4R3F8 94 aa7.72□□□□□ -1.17
UFD1-202ENST00000399523 LOC105371267A0A1B0GV96 52 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 A0A1B0GW54 56 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
UFD1-202ENST00000399523 LCA10Q71F78 164 aa7.68□□□□□ -1.18
UFD1-202ENST00000399523 CRIPTQ9P021 101 aa7.66□□□□□ -1.18
UFD1-202ENST00000399523 K7ERJ3 54 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 S100A6P06703 90 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 PAM16Q9Y3D7 125 aa7.63□□□□□ -1.19
UFD1-202ENST00000399523 BAALC-AS2P0C853 105 aa7.62□□□□□ -1.19
UFD1-202ENST00000399523 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
UFD1-202ENST00000399523 LOC110117498A0A087WWA1 95 aa7.6□□□□□ -1.19
UFD1-202ENST00000399523 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
UFD1-202ENST00000399523 K7EQZ3 153 aa7.58□□□□□ -1.2
UFD1-202ENST00000399523 MT1XP80297 61 aa7.57□□□□□ -1.2
UFD1-202ENST00000399523 NREPQ16612 68 aa7.57□□□□□ -1.2
UFD1-202ENST00000399523 JMJD7-PLA2G4BH0Y9G9 81 aa7.55□□□□□ -1.2
UFD1-202ENST00000399523 C1orf64Q8NEQ6 169 aa7.55□□□□□ -1.2
UFD1-202ENST00000399523 SMIM6P0DI80 62 aa7.54□□□□□ -1.2
UFD1-202ENST00000399523 PDE6GP18545 87 aa7.54□□□□□ -1.2
UFD1-202ENST00000399523 SCGB1C2P0DMR2 95 aa7.53□□□□□ -1.2
UFD1-202ENST00000399523 KRTAP12-2P59991 146 aa7.53□□□□□ -1.2
UFD1-202ENST00000399523 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
UFD1-202ENST00000399523 HSD52Q0P140 79 aa7.5□□□□□ -1.21
UFD1-202ENST00000399523 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
UFD1-202ENST00000399523 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
UFD1-202ENST00000399523 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
UFD1-202ENST00000399523 CXCL6P80162 114 aa7.46□□□□□ -1.22
UFD1-202ENST00000399523 C14orf132Q9NPU4 83 aa7.46□□□□□ -1.22
UFD1-202ENST00000399523 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
UFD1-202ENST00000399523 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
UFD1-202ENST00000399523 BPY2O14599 106 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms