RNA–Protein interactions for RNA: ENST00000399240.5

RUNX1-205, Transcript of runt related transcription factor 1, humanhuman

TSL 3 BASIC

Gene RUNX1, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-205ENST00000399240 IGHV6-1A0A0B4J1U7 121 aa13.37□□□□□ -0.27
RUNX1-205ENST00000399240 IGKV3D-7A0A0C4DH55 119 aa13.37□□□□□ -0.27
RUNX1-205ENST00000399240 A0A1B0GVX0 72 aa13.37□□□□□ -0.27
RUNX1-205ENST00000399240 CDIP1Q9H305 208 aa13.37□□□□□ -0.27
RUNX1-205ENST00000399240 NOTCH2NLQ7Z3S9 236 aa13.36□□□□□ -0.27
RUNX1-205ENST00000399240 NDUFB1O75438 58 aa13.34□□□□□ -0.27
RUNX1-205ENST00000399240 K7EQZ3 153 aa13.32□□□□□ -0.28
RUNX1-205ENST00000399240 XP32Q5T750 250 aa13.32□□□□□ -0.28
RUNX1-205ENST00000399240 PRR15Q8IV56 129 aa13.32□□□□□ -0.28
RUNX1-205ENST00000399240 Q8N9L7 120 aa13.31□□□□□ -0.28
RUNX1-205ENST00000399240 LINC00313P59037 77 aa13.29□□□□□ -0.28
RUNX1-205ENST00000399240 K7ERU9 68 aa13.28□□□□□ -0.28
RUNX1-205ENST00000399240 CXCL6P80162 114 aa13.26□□□□□ -0.29
RUNX1-205ENST00000399240 C8orf87E5RJ46 101 aa13.25□□□□□ -0.29
RUNX1-205ENST00000399240 KRTAP16-1A8MUX0 517 aa13.24□□□□□ -0.29
RUNX1-205ENST00000399240 C8orf17Q9NRJ1 99 aa13.24□□□□□ -0.29
RUNX1-205ENST00000399240 LINC00643Q86TS7 51 aa13.22□□□□□ -0.29
RUNX1-205ENST00000399240 MMP24-AS1A0A0U1RRL7 71 aa13.2□□□□□ -0.3
RUNX1-205ENST00000399240 ATP5EP2Q5VTU8 51 aa13.18□□□□□ -0.3
RUNX1-205ENST00000399240 UBR4Q5T4S7 5183 aa13.14□□□□□ -0.31
RUNX1-205ENST00000399240 C20orf166-AS1Q96NR2 134 aa13.14□□□□□ -0.31
RUNX1-205ENST00000399240 RPL37P61927 97 aaKnown RBP13.13□□□□□ -0.31
RUNX1-205ENST00000399240 MUC17Q685J3 4493 aa13.12□□□□□ -0.31
RUNX1-205ENST00000399240 A8MUU9 505 aa13.12□□□□□ -0.31
RUNX1-205ENST00000399240 Q75L30 129 aa13.11□□□□□ -0.31
RUNX1-205ENST00000399240 hDV103S1A0JD37 113 aa13.09□□□□□ -0.31
RUNX1-205ENST00000399240 WFDC13Q8IUB5 93 aa13.09□□□□□ -0.31
RUNX1-205ENST00000399240 TMEM254Q8TBM7 123 aa13.07□□□□□ -0.32
RUNX1-205ENST00000399240 HCG22E2RYF7 251 aa13.06□□□□□ -0.32
RUNX1-205ENST00000399240 HIST1H4AP62805 103 aaKnown RBP13.06□□□□□ -0.32
RUNX1-205ENST00000399240 CASC2Q6XLA1 102 aa13.05□□□□□ -0.32
RUNX1-205ENST00000399240 MRPL34Q9BQ48 92 aaKnown RBP13.05□□□□□ -0.32
RUNX1-205ENST00000399240 Q8N9P0 234 aaPredicted RBP13.04□□□□□ -0.32
RUNX1-205ENST00000399240 SEC61BP60468 96 aaKnown RBP13.03□□□□□ -0.32
RUNX1-205ENST00000399240 PCOTHQ58A44 107 aa13.02□□□□□ -0.33
RUNX1-205ENST00000399240 A0A087WVE0 104 aa12.99□□□□□ -0.33
RUNX1-205ENST00000399240 MT-ATP8P03928 68 aa12.97□□□□□ -0.33
RUNX1-205ENST00000399240 ATP11AUNQ6ZP68 121 aa12.95□□□□□ -0.34
RUNX1-205ENST00000399240 NDUFS5O43920 106 aa12.92□□□□□ -0.34
RUNX1-205ENST00000399240 MUC2Q02817 5179 aa12.88□□□□□ -0.35
RUNX1-205ENST00000399240 RNF213Q63HN8 5207 aa12.88□□□□□ -0.35
RUNX1-205ENST00000399240 KRTAP4-1Q9BYQ7 146 aa12.88□□□□□ -0.35
RUNX1-205ENST00000399240 ZCCHC13Q8WW36 166 aaKnown RBP12.86□□□□□ -0.35
RUNX1-205ENST00000399240 IMUPQ9GZP8 106 aa12.84□□□□□ -0.35
RUNX1-205ENST00000399240 Q5W150 140 aa12.78□□□□□ -0.36
RUNX1-205ENST00000399240 TP53AIP1Q9HCN2 124 aa12.73□□□□□ -0.37
RUNX1-205ENST00000399240 FAM236AA0A1B0GUQ0 79 aa12.64□□□□□ -0.39
RUNX1-205ENST00000399240 FAM236BA0A1B0GV22 79 aa12.64□□□□□ -0.39
RUNX1-205ENST00000399240 OCR1Q9BZK8 76 aa12.64□□□□□ -0.39
RUNX1-205ENST00000399240 SCGB1A1P11684 91 aa12.61□□□□□ -0.39
RUNX1-205ENST00000399240 SPINK7P58062 85 aa12.61□□□□□ -0.39
RUNX1-205ENST00000399240 UQCRQO14949 82 aa12.6□□□□□ -0.39
RUNX1-205ENST00000399240 TRAV22A0A0B4J277 110 aa12.56□□□□□ -0.4
RUNX1-205ENST00000399240 IGKV2D-30A0A075B6S6 120 aa12.55□□□□□ -0.4
RUNX1-205ENST00000399240 IGKV2-30P06310 120 aa12.55□□□□□ -0.4
RUNX1-205ENST00000399240 HRES1P13985 223 aa12.52□□□□□ -0.41
RUNX1-205ENST00000399240 H0Y9P7 68 aa12.5□□□□□ -0.41
RUNX1-205ENST00000399240 C7orf65Q6ZTY9 151 aa12.5□□□□□ -0.41
RUNX1-205ENST00000399240 KRTAP19-2Q3LHN2 52 aa12.47□□□□□ -0.41
RUNX1-205ENST00000399240 ATOX1O00244 68 aa12.43□□□□□ -0.42
RUNX1-205ENST00000399240 MPLKIPQ8TAP9 179 aa12.43□□□□□ -0.42
RUNX1-205ENST00000399240 C5orf47Q569G3 176 aa12.42□□□□□ -0.42
RUNX1-205ENST00000399240 SMIM20Q8N5G0 67 aa12.41□□□□□ -0.42
RUNX1-205ENST00000399240 TRAV7A0A075B6U4 112 aa12.4□□□□□ -0.42
RUNX1-205ENST00000399240 FAT4Q6V0I7 4981 aa12.4□□□□□ -0.42
RUNX1-205ENST00000399240 LOC101927531A0A1B0GV80 90 aa12.39□□□□□ -0.43
RUNX1-205ENST00000399240 MP68P56378 58 aa12.39□□□□□ -0.43
RUNX1-205ENST00000399240 CYP4F30PQ9H0H9 118 aa12.39□□□□□ -0.43
RUNX1-205ENST00000399240 LCE2CQ5TA81 110 aa12.38□□□□□ -0.43
RUNX1-205ENST00000399240 LINC00208Q96KT6 92 aa12.38□□□□□ -0.43
RUNX1-205ENST00000399240 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
RUNX1-205ENST00000399240 A0A0U1RQV1 116 aa12.34□□□□□ -0.43
RUNX1-205ENST00000399240 RBM12B-AS1Q9P1G2 102 aa12.33□□□□□ -0.44
RUNX1-205ENST00000399240 COX6B2Q6YFQ2 88 aa12.3□□□□□ -0.44
RUNX1-205ENST00000399240 SERP2Q8N6R1 65 aa12.29□□□□□ -0.44
RUNX1-205ENST00000399240 H3BPC8 53 aa12.28□□□□□ -0.44
RUNX1-205ENST00000399240 C4orf26Q17RF5 130 aa12.27□□□□□ -0.44
RUNX1-205ENST00000399240 FAM236DA0A1B0GTK5 79 aa12.26□□□□□ -0.45
RUNX1-205ENST00000399240 FAM236CP0DP71 79 aa12.26□□□□□ -0.45
RUNX1-205ENST00000399240 KLKP1Q107X0 134 aa12.22□□□□□ -0.45
RUNX1-205ENST00000399240 FLGP20930 4061 aaPredicted RBP12.19□□□□□ -0.46
RUNX1-205ENST00000399240 MT1HP80294 61 aa12.15□□□□□ -0.46
RUNX1-205ENST00000399240 SNURFQ9Y675 71 aa12.14□□□□□ -0.47
RUNX1-205ENST00000399240 C20orf197Q8N268 126 aa12.13□□□□□ -0.47
RUNX1-205ENST00000399240 KRTAP3-1Q9BYR8 98 aa12.13□□□□□ -0.47
RUNX1-205ENST00000399240 COX7CP15954 63 aa12.13□□□□□ -0.47
RUNX1-205ENST00000399240 LCE2AQ5TA79 106 aaPredicted RBP12.11□□□□□ -0.47
RUNX1-205ENST00000399240 ANAPC13Q9BS18 74 aa12.11□□□□□ -0.47
RUNX1-205ENST00000399240 H1FX-AS1Q4G0G2 97 aa12.06□□□□□ -0.48
RUNX1-205ENST00000399240 M0R2T5 61 aa11.94□□□□□ -0.5
RUNX1-205ENST00000399240 CYSTM1Q9H1C7 97 aa11.92□□□□□ -0.5
RUNX1-205ENST00000399240 CCDC179H3BU77 68 aa11.89□□□□□ -0.51
RUNX1-205ENST00000399240 A8MUN3 132 aa11.88□□□□□ -0.51
RUNX1-205ENST00000399240 DMAC1Q96GE9 116 aa11.86□□□□□ -0.51
RUNX1-205ENST00000399240 S4R3F8 94 aa11.84□□□□□ -0.51
RUNX1-205ENST00000399240 LCA10Q71F78 164 aa11.81□□□□□ -0.52
RUNX1-205ENST00000399240 H7BZZ5 65 aa11.79□□□□□ -0.52
RUNX1-205ENST00000399240 SPANXA2-OT1Q8N9U9 137 aa11.79□□□□□ -0.52
RUNX1-205ENST00000399240 KRTAP10-6P60371 365 aaPredicted RBP11.79□□□□□ -0.52
RUNX1-205ENST00000399240 NDUFC1O43677 76 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms