RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 A0A1B0GVX0 72 aa9.35□□□□□ -0.91
CSNK1D-204ENST00000398519 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
CSNK1D-204ENST00000398519 NOTCH2NLQ7Z3S9 236 aa9.34□□□□□ -0.91
CSNK1D-204ENST00000398519 LINC00313P59037 77 aa9.33□□□□□ -0.92
CSNK1D-204ENST00000398519 Q6ZVQ6 151 aa9.33□□□□□ -0.92
CSNK1D-204ENST00000398519 LINC00846Q9NV44 126 aa9.33□□□□□ -0.92
CSNK1D-204ENST00000398519 A8MWP4 228 aa9.32□□□□□ -0.92
CSNK1D-204ENST00000398519 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 KRTAP16-1A8MUX0 517 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 NDUFB1O75438 58 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 Q75L30 129 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 C8orf87E5RJ46 101 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
CSNK1D-204ENST00000398519 BPY2O14599 106 aa9.27□□□□□ -0.93
CSNK1D-204ENST00000398519 UBL5Q9BZL1 73 aa9.27□□□□□ -0.93
CSNK1D-204ENST00000398519 A8MUU9 505 aa9.26□□□□□ -0.93
CSNK1D-204ENST00000398519 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
CSNK1D-204ENST00000398519 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
CSNK1D-204ENST00000398519 K7EQZ3 153 aa9.24□□□□□ -0.93
CSNK1D-204ENST00000398519 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
CSNK1D-204ENST00000398519 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
CSNK1D-204ENST00000398519 FAM240AA0A1B0GVK7 77 aa9.18□□□□□ -0.94
CSNK1D-204ENST00000398519 Q8N9L7 120 aa9.18□□□□□ -0.94
CSNK1D-204ENST00000398519 MMP24-AS1A0A0U1RRL7 71 aa9.17□□□□□ -0.94
CSNK1D-204ENST00000398519 ACYP1P07311 99 aa9.17□□□□□ -0.94
CSNK1D-204ENST00000398519 Q8N9P0 234 aaPredicted RBP9.13□□□□□ -0.95
CSNK1D-204ENST00000398519 CXCL6P80162 114 aa9.11□□□□□ -0.95
CSNK1D-204ENST00000398519 TMEM254Q8TBM7 123 aa9.11□□□□□ -0.95
CSNK1D-204ENST00000398519 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
CSNK1D-204ENST00000398519 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
CSNK1D-204ENST00000398519 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
CSNK1D-204ENST00000398519 A0A0U1RQV1 116 aa9.06□□□□□ -0.96
CSNK1D-204ENST00000398519 WFDC13Q8IUB5 93 aa9.06□□□□□ -0.96
CSNK1D-204ENST00000398519 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
CSNK1D-204ENST00000398519 ZCCHC13Q8WW36 166 aaKnown RBP9.04□□□□□ -0.96
CSNK1D-204ENST00000398519 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
CSNK1D-204ENST00000398519 J3QR89 54 aa9.02□□□□□ -0.97
CSNK1D-204ENST00000398519 ATP5EP2Q5VTU8 51 aa9.01□□□□□ -0.97
CSNK1D-204ENST00000398519 NDUFS5O43920 106 aa8.99□□□□□ -0.97
CSNK1D-204ENST00000398519 KRTAP19-2Q3LHN2 52 aa8.99□□□□□ -0.97
CSNK1D-204ENST00000398519 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
CSNK1D-204ENST00000398519 LCE2CQ5TA81 110 aa8.93□□□□□ -0.98
CSNK1D-204ENST00000398519 HIST1H4AP62805 103 aaKnown RBP8.91□□□□□ -0.98
CSNK1D-204ENST00000398519 Q5W150 140 aa8.89□□□□□ -0.99
CSNK1D-204ENST00000398519 SPINK7P58062 85 aa8.88□□□□□ -0.99
CSNK1D-204ENST00000398519 K7ERU9 68 aa8.87□□□□□ -0.99
CSNK1D-204ENST00000398519 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
CSNK1D-204ENST00000398519 HRES1P13985 223 aa8.86□□□□□ -0.99
CSNK1D-204ENST00000398519 A0A087WVE0 104 aa8.86□□□□□ -0.99
CSNK1D-204ENST00000398519 COX6B2Q6YFQ2 88 aa8.84□□□□□ -0.99
CSNK1D-204ENST00000398519 MPLKIPQ8TAP9 179 aa8.82□□□□□ -1
CSNK1D-204ENST00000398519 TP53AIP1Q9HCN2 124 aa8.82□□□□□ -1
CSNK1D-204ENST00000398519 MT1HP80294 61 aa8.79□□□□□ -1
CSNK1D-204ENST00000398519 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1.01
CSNK1D-204ENST00000398519 IGKV2-30P06310 120 aa8.77□□□□□ -1.01
CSNK1D-204ENST00000398519 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
CSNK1D-204ENST00000398519 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
CSNK1D-204ENST00000398519 C7orf65Q6ZTY9 151 aa8.75□□□□□ -1.01
CSNK1D-204ENST00000398519 FAM236DA0A1B0GTK5 79 aa8.72□□□□□ -1.01
CSNK1D-204ENST00000398519 MT-ATP8P03928 68 aa8.72□□□□□ -1.01
CSNK1D-204ENST00000398519 FAM236CP0DP71 79 aa8.72□□□□□ -1.01
CSNK1D-204ENST00000398519 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
CSNK1D-204ENST00000398519 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
CSNK1D-204ENST00000398519 UQCRQO14949 82 aa8.67□□□□□ -1.02
CSNK1D-204ENST00000398519 OCR1Q9BZK8 76 aa8.64□□□□□ -1.03
CSNK1D-204ENST00000398519 M0R2T5 61 aa8.63□□□□□ -1.03
CSNK1D-204ENST00000398519 H0Y9P7 68 aa8.61□□□□□ -1.03
CSNK1D-204ENST00000398519 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
CSNK1D-204ENST00000398519 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
CSNK1D-204ENST00000398519 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
CSNK1D-204ENST00000398519 ATOX1O00244 68 aa8.58□□□□□ -1.04
CSNK1D-204ENST00000398519 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
CSNK1D-204ENST00000398519 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
CSNK1D-204ENST00000398519 FAM236AA0A1B0GUQ0 79 aa8.54□□□□□ -1.04
CSNK1D-204ENST00000398519 FAM236BA0A1B0GV22 79 aa8.54□□□□□ -1.04
CSNK1D-204ENST00000398519 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
CSNK1D-204ENST00000398519 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
CSNK1D-204ENST00000398519 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.05
CSNK1D-204ENST00000398519 C5orf47Q569G3 176 aa8.51□□□□□ -1.05
CSNK1D-204ENST00000398519 MP68P56378 58 aa8.5□□□□□ -1.05
CSNK1D-204ENST00000398519 LINC00208Q96KT6 92 aa8.5□□□□□ -1.05
CSNK1D-204ENST00000398519 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
CSNK1D-204ENST00000398519 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
CSNK1D-204ENST00000398519 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
CSNK1D-204ENST00000398519 H3BPC8 53 aa8.43□□□□□ -1.06
CSNK1D-204ENST00000398519 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
CSNK1D-204ENST00000398519 TRAV7A0A075B6U4 112 aa8.42□□□□□ -1.06
CSNK1D-204ENST00000398519 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
CSNK1D-204ENST00000398519 S4R3F8 94 aa8.32□□□□□ -1.08
CSNK1D-204ENST00000398519 MT2AP02795 61 aa8.3□□□□□ -1.08
CSNK1D-204ENST00000398519 LCA10Q71F78 164 aa8.29□□□□□ -1.08
CSNK1D-204ENST00000398519 SERP2Q8N6R1 65 aa8.29□□□□□ -1.08
CSNK1D-204ENST00000398519 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
CSNK1D-204ENST00000398519 LCE2DQ5TA82 110 aaPredicted RBP8.27□□□□□ -1.09
CSNK1D-204ENST00000398519 A8MUN3 132 aa8.26□□□□□ -1.09
CSNK1D-204ENST00000398519 MT1FP04733 61 aa8.24□□□□□ -1.09
CSNK1D-204ENST00000398519 SNURFQ9Y675 71 aa8.23□□□□□ -1.09
CSNK1D-204ENST00000398519 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
CSNK1D-204ENST00000398519 C20orf197Q8N268 126 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms