RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 IGHV6-1A0A0B4J1U7 121 aa13.53□□□□□ -0.24
TSPAN4-207ENST00000397411 NREPQ16612 68 aa13.47□□□□□ -0.25
TSPAN4-207ENST00000397411 A0A1B0GVX0 72 aa13.46□□□□□ -0.25
TSPAN4-207ENST00000397411 NDUFB1O75438 58 aa13.46□□□□□ -0.25
TSPAN4-207ENST00000397411 C20orf166-AS1Q96NR2 134 aa13.46□□□□□ -0.25
TSPAN4-207ENST00000397411 A8MUU9 505 aa13.44□□□□□ -0.26
TSPAN4-207ENST00000397411 C8orf87E5RJ46 101 aa13.44□□□□□ -0.26
TSPAN4-207ENST00000397411 SMCPP49901 116 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-207ENST00000397411 PRO0461Q9UI25 63 aa13.43□□□□□ -0.26
TSPAN4-207ENST00000397411 NOTCH2NLQ7Z3S9 236 aa13.42□□□□□ -0.26
TSPAN4-207ENST00000397411 F8W1H4 67 aa13.4□□□□□ -0.26
TSPAN4-207ENST00000397411 KRTAP16-1A8MUX0 517 aa13.36□□□□□ -0.27
TSPAN4-207ENST00000397411 FAT4Q6V0I7 4981 aa13.35□□□□□ -0.27
TSPAN4-207ENST00000397411 A8MWP4 228 aa13.35□□□□□ -0.27
TSPAN4-207ENST00000397411 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
TSPAN4-207ENST00000397411 LCE2AQ5TA79 106 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-207ENST00000397411 C8orf17Q9NRJ1 99 aa13.26□□□□□ -0.29
TSPAN4-207ENST00000397411 BPY2O14599 106 aa13.25□□□□□ -0.29
TSPAN4-207ENST00000397411 PRR15Q8IV56 129 aa13.24□□□□□ -0.29
TSPAN4-207ENST00000397411 ETDBQ3ZM63 59 aa13.22□□□□□ -0.29
TSPAN4-207ENST00000397411 COX6B2Q6YFQ2 88 aa13.22□□□□□ -0.29
TSPAN4-207ENST00000397411 Q6ZVQ6 151 aa13.21□□□□□ -0.29
TSPAN4-207ENST00000397411 UBL5Q9BZL1 73 aa13.21□□□□□ -0.29
TSPAN4-207ENST00000397411 LCE2CQ5TA81 110 aa13.16□□□□□ -0.3
TSPAN4-207ENST00000397411 KRTAP19-2Q3LHN2 52 aa13.15□□□□□ -0.3
TSPAN4-207ENST00000397411 K7EQZ3 153 aa13.14□□□□□ -0.31
TSPAN4-207ENST00000397411 LINC00846Q9NV44 126 aa13.13□□□□□ -0.31
TSPAN4-207ENST00000397411 Q8N9P0 234 aaPredicted RBP13.11□□□□□ -0.31
TSPAN4-207ENST00000397411 ZCCHC13Q8WW36 166 aaKnown RBP13.1□□□□□ -0.31
TSPAN4-207ENST00000397411 MMP24-AS1A0A0U1RRL7 71 aa13.09□□□□□ -0.31
TSPAN4-207ENST00000397411 TMEM254Q8TBM7 123 aa13.08□□□□□ -0.32
TSPAN4-207ENST00000397411 hDV103S1A0JD37 113 aa13.07□□□□□ -0.32
TSPAN4-207ENST00000397411 MRPL34Q9BQ48 92 aaKnown RBP13.07□□□□□ -0.32
TSPAN4-207ENST00000397411 A0A1B0GV90 55 aa13.05□□□□□ -0.32
TSPAN4-207ENST00000397411 NDUFS5O43920 106 aa13.04□□□□□ -0.32
TSPAN4-207ENST00000397411 Q8N9L7 120 aa13.04□□□□□ -0.32
TSPAN4-207ENST00000397411 ACYP1P07311 99 aa13.02□□□□□ -0.33
TSPAN4-207ENST00000397411 MT1HP80294 61 aa13.01□□□□□ -0.33
TSPAN4-207ENST00000397411 M0R2T5 61 aa12.98□□□□□ -0.33
TSPAN4-207ENST00000397411 WFDC13Q8IUB5 93 aa12.98□□□□□ -0.33
TSPAN4-207ENST00000397411 CASC2Q6XLA1 102 aa12.96□□□□□ -0.33
TSPAN4-207ENST00000397411 FAM240AA0A1B0GVK7 77 aa12.95□□□□□ -0.34
TSPAN4-207ENST00000397411 RBM12B-AS1Q9P1G2 102 aa12.95□□□□□ -0.34
TSPAN4-207ENST00000397411 FAM236DA0A1B0GTK5 79 aa12.94□□□□□ -0.34
TSPAN4-207ENST00000397411 FAM236CP0DP71 79 aa12.94□□□□□ -0.34
TSPAN4-207ENST00000397411 SPINK7P58062 85 aa12.92□□□□□ -0.34
TSPAN4-207ENST00000397411 CXCL6P80162 114 aa12.92□□□□□ -0.34
TSPAN4-207ENST00000397411 HRES1P13985 223 aa12.88□□□□□ -0.35
TSPAN4-207ENST00000397411 HCG22E2RYF7 251 aa12.85□□□□□ -0.35
TSPAN4-207ENST00000397411 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
TSPAN4-207ENST00000397411 J3QR89 54 aa12.79□□□□□ -0.36
TSPAN4-207ENST00000397411 MPLKIPQ8TAP9 179 aa12.79□□□□□ -0.36
TSPAN4-207ENST00000397411 Q5W150 140 aa12.74□□□□□ -0.37
TSPAN4-207ENST00000397411 KRTAP10-6P60371 365 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-207ENST00000397411 FLGP20930 4061 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-207ENST00000397411 IGKV2D-30A0A075B6S6 120 aa12.71□□□□□ -0.37
TSPAN4-207ENST00000397411 IGKV2-30P06310 120 aa12.71□□□□□ -0.37
TSPAN4-207ENST00000397411 LINC00643Q86TS7 51 aa12.68□□□□□ -0.38
TSPAN4-207ENST00000397411 KRTAP9-2Q9BYQ4 174 aa12.67□□□□□ -0.38
TSPAN4-207ENST00000397411 LORP23490 312 aaPredicted RBP12.66□□□□□ -0.38
TSPAN4-207ENST00000397411 C7orf65Q6ZTY9 151 aa12.65□□□□□ -0.38
TSPAN4-207ENST00000397411 TP53AIP1Q9HCN2 124 aa12.63□□□□□ -0.39
TSPAN4-207ENST00000397411 HIST1H4AP62805 103 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-207ENST00000397411 LCE2DQ5TA82 110 aaPredicted RBP12.51□□□□□ -0.41
TSPAN4-207ENST00000397411 K7ERU9 68 aa12.46□□□□□ -0.41
TSPAN4-207ENST00000397411 H1FX-AS1Q4G0G2 97 aa12.44□□□□□ -0.42
TSPAN4-207ENST00000397411 C4orf26Q17RF5 130 aa12.42□□□□□ -0.42
TSPAN4-207ENST00000397411 A0A087WVE0 104 aa12.4□□□□□ -0.42
TSPAN4-207ENST00000397411 TRAV22A0A0B4J277 110 aa12.37□□□□□ -0.43
TSPAN4-207ENST00000397411 UQCRQO14949 82 aa12.36□□□□□ -0.43
TSPAN4-207ENST00000397411 KRTAP9-8Q9BYQ0 159 aa12.35□□□□□ -0.43
TSPAN4-207ENST00000397411 ATOX1O00244 68 aa12.3□□□□□ -0.44
TSPAN4-207ENST00000397411 LOC101927531A0A1B0GV80 90 aa12.28□□□□□ -0.44
TSPAN4-207ENST00000397411 CYP4F30PQ9H0H9 118 aa12.27□□□□□ -0.45
TSPAN4-207ENST00000397411 C1orf64Q8NEQ6 169 aa12.26□□□□□ -0.45
TSPAN4-207ENST00000397411 H0Y9P7 68 aa12.25□□□□□ -0.45
TSPAN4-207ENST00000397411 MT2AP02795 61 aa12.24□□□□□ -0.45
TSPAN4-207ENST00000397411 IMUPQ9GZP8 106 aa12.24□□□□□ -0.45
TSPAN4-207ENST00000397411 SCGB1A1P11684 91 aa12.2□□□□□ -0.46
TSPAN4-207ENST00000397411 KRTAP10-10P60014 251 aa12.2□□□□□ -0.46
TSPAN4-207ENST00000397411 MP68P56378 58 aa12.16□□□□□ -0.46
TSPAN4-207ENST00000397411 KRTAP3-1Q9BYR8 98 aa12.15□□□□□ -0.46
TSPAN4-207ENST00000397411 OCR1Q9BZK8 76 aa12.15□□□□□ -0.46
TSPAN4-207ENST00000397411 KRTAP9-6A0A140TA67 174 aa12.14□□□□□ -0.47
TSPAN4-207ENST00000397411 MT1FP04733 61 aa12.13□□□□□ -0.47
TSPAN4-207ENST00000397411 MT-ATP8P03928 68 aa12.11□□□□□ -0.47
TSPAN4-207ENST00000397411 LINC00208Q96KT6 92 aa12.11□□□□□ -0.47
TSPAN4-207ENST00000397411 S4R3F8 94 aa12.11□□□□□ -0.47
TSPAN4-207ENST00000397411 C5orf47Q569G3 176 aa12.1□□□□□ -0.47
TSPAN4-207ENST00000397411 CRCT1Q9UGL9 99 aa12.06□□□□□ -0.48
TSPAN4-207ENST00000397411 H3BPC8 53 aa12.04□□□□□ -0.48
TSPAN4-207ENST00000397411 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.49
TSPAN4-207ENST00000397411 FSIP2Q5CZC0 6907 aa12□□□□□ -0.49
TSPAN4-207ENST00000397411 CSAG1Q6PB30 78 aa11.99□□□□□ -0.49
TSPAN4-207ENST00000397411 FAM236AA0A1B0GUQ0 79 aa11.97□□□□□ -0.49
TSPAN4-207ENST00000397411 FAM236BA0A1B0GV22 79 aa11.97□□□□□ -0.49
TSPAN4-207ENST00000397411 LCA10Q71F78 164 aa11.97□□□□□ -0.49
TSPAN4-207ENST00000397411 KRTAP9-3Q9BYQ3 159 aa11.95□□□□□ -0.5
TSPAN4-207ENST00000397411 KLKP1Q107X0 134 aa11.92□□□□□ -0.5
TSPAN4-207ENST00000397411 TRAV7A0A075B6U4 112 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms