RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 F8W1H4 67 aa15.77■□□□□ 0.11
CHCHD4-202ENST00000396914 A0A0U1RQV1 116 aa15.72■□□□□ 0.11
CHCHD4-202ENST00000396914 A0A1B0GVX0 72 aa15.72■□□□□ 0.11
CHCHD4-202ENST00000396914 NDUFB1O75438 58 aa15.72■□□□□ 0.11
CHCHD4-202ENST00000396914 Q75L30 129 aa15.72■□□□□ 0.11
CHCHD4-202ENST00000396914 KRTAP4-1Q9BYQ7 146 aa15.7■□□□□ 0.1
CHCHD4-202ENST00000396914 NOTCH2NLQ7Z3S9 236 aa15.69■□□□□ 0.1
CHCHD4-202ENST00000396914 ATP11AUNQ6ZP68 121 aa15.68■□□□□ 0.1
CHCHD4-202ENST00000396914 C8orf87E5RJ46 101 aa15.66■□□□□ 0.1
CHCHD4-202ENST00000396914 ETDBQ3ZM63 59 aa15.65■□□□□ 0.1
CHCHD4-202ENST00000396914 C20orf166-AS1Q96NR2 134 aa15.65■□□□□ 0.1
CHCHD4-202ENST00000396914 A8MWP4 228 aa15.64■□□□□ 0.09
CHCHD4-202ENST00000396914 A8MUU9 505 aa15.61■□□□□ 0.09
CHCHD4-202ENST00000396914 KRTAP16-1A8MUX0 517 aa15.6■□□□□ 0.09
CHCHD4-202ENST00000396914 IGKV3D-7A0A0C4DH55 119 aa15.58■□□□□ 0.08
CHCHD4-202ENST00000396914 Q6ZVQ6 151 aa15.57■□□□□ 0.08
CHCHD4-202ENST00000396914 BPY2O14599 106 aa15.55■□□□□ 0.08
CHCHD4-202ENST00000396914 A0A1B0GV90 55 aa15.51■□□□□ 0.07
CHCHD4-202ENST00000396914 UBL5Q9BZL1 73 aa15.51■□□□□ 0.07
CHCHD4-202ENST00000396914 C8orf17Q9NRJ1 99 aa15.51■□□□□ 0.07
CHCHD4-202ENST00000396914 LINC00846Q9NV44 126 aa15.51■□□□□ 0.07
CHCHD4-202ENST00000396914 PRR15Q8IV56 129 aa15.51■□□□□ 0.07
CHCHD4-202ENST00000396914 K7EQZ3 153 aa15.45■□□□□ 0.06
CHCHD4-202ENST00000396914 FAT4Q6V0I7 4981 aa15.37■□□□□ 0.05
CHCHD4-202ENST00000396914 Q8N9L7 120 aa15.36■□□□□ 0.05
CHCHD4-202ENST00000396914 MMP24-AS1A0A0U1RRL7 71 aa15.35■□□□□ 0.05
CHCHD4-202ENST00000396914 Q8N9P0 234 aaPredicted RBP15.32■□□□□ 0.04
CHCHD4-202ENST00000396914 hDV103S1A0JD37 113 aa15.31■□□□□ 0.04
CHCHD4-202ENST00000396914 TMEM254Q8TBM7 123 aa15.3■□□□□ 0.04
CHCHD4-202ENST00000396914 MRPL34Q9BQ48 92 aaKnown RBP15.29■□□□□ 0.04
CHCHD4-202ENST00000396914 ZCCHC13Q8WW36 166 aaKnown RBP15.26■□□□□ 0.03
CHCHD4-202ENST00000396914 NDUFS5O43920 106 aa15.25■□□□□ 0.03
CHCHD4-202ENST00000396914 ACYP1P07311 99 aa15.25■□□□□ 0.03
CHCHD4-202ENST00000396914 WFDC13Q8IUB5 93 aa15.25■□□□□ 0.03
CHCHD4-202ENST00000396914 COX6B2Q6YFQ2 88 aa15.23■□□□□ 0.03
CHCHD4-202ENST00000396914 CASC2Q6XLA1 102 aa15.21■□□□□ 0.03
CHCHD4-202ENST00000396914 KRTAP19-2Q3LHN2 52 aa15.17■□□□□ 0.02
CHCHD4-202ENST00000396914 FAM240AA0A1B0GVK7 77 aa15.17■□□□□ 0.02
CHCHD4-202ENST00000396914 CXCL6P80162 114 aa15.17■□□□□ 0.02
CHCHD4-202ENST00000396914 LCE2AQ5TA79 106 aaPredicted RBP15.17■□□□□ 0.02
CHCHD4-202ENST00000396914 LCE2CQ5TA81 110 aa15.15■□□□□ 0.02
CHCHD4-202ENST00000396914 HCG22E2RYF7 251 aa15.11■□□□□ 0.01
CHCHD4-202ENST00000396914 SPINK7P58062 85 aa15.03■□□□□ -0
CHCHD4-202ENST00000396914 ATP5EP2Q5VTU8 51 aa14.99□□□□□ -0.01
CHCHD4-202ENST00000396914 MT1HP80294 61 aa14.98□□□□□ -0.01
CHCHD4-202ENST00000396914 FAM236DA0A1B0GTK5 79 aa14.97□□□□□ -0.01
CHCHD4-202ENST00000396914 FAM236CP0DP71 79 aa14.97□□□□□ -0.01
CHCHD4-202ENST00000396914 RBM12B-AS1Q9P1G2 102 aa14.97□□□□□ -0.01
CHCHD4-202ENST00000396914 J3QR89 54 aa14.96□□□□□ -0.01
CHCHD4-202ENST00000396914 HRES1P13985 223 aa14.96□□□□□ -0.01
CHCHD4-202ENST00000396914 HIST1H4AP62805 103 aaKnown RBP14.92□□□□□ -0.02
CHCHD4-202ENST00000396914 Q5W150 140 aa14.92□□□□□ -0.02
CHCHD4-202ENST00000396914 LINC00643Q86TS7 51 aa14.91□□□□□ -0.02
CHCHD4-202ENST00000396914 M0R2T5 61 aa14.9□□□□□ -0.02
CHCHD4-202ENST00000396914 IGKV2D-30A0A075B6S6 120 aa14.84□□□□□ -0.03
CHCHD4-202ENST00000396914 IGKV2-30P06310 120 aa14.84□□□□□ -0.03
CHCHD4-202ENST00000396914 MPLKIPQ8TAP9 179 aa14.84□□□□□ -0.03
CHCHD4-202ENST00000396914 TP53AIP1Q9HCN2 124 aa14.79□□□□□ -0.04
CHCHD4-202ENST00000396914 C7orf65Q6ZTY9 151 aa14.77□□□□□ -0.04
CHCHD4-202ENST00000396914 A0A087WVE0 104 aa14.71□□□□□ -0.05
CHCHD4-202ENST00000396914 FLGP20930 4061 aaPredicted RBP14.69□□□□□ -0.06
CHCHD4-202ENST00000396914 K7ERU9 68 aa14.62□□□□□ -0.07
CHCHD4-202ENST00000396914 KRTAP10-6P60371 365 aaPredicted RBP14.61□□□□□ -0.07
CHCHD4-202ENST00000396914 TRAV22A0A0B4J277 110 aa14.54□□□□□ -0.08
CHCHD4-202ENST00000396914 LORP23490 312 aaPredicted RBP14.54□□□□□ -0.08
CHCHD4-202ENST00000396914 UQCRQO14949 82 aa14.51□□□□□ -0.09
CHCHD4-202ENST00000396914 C4orf26Q17RF5 130 aa14.5□□□□□ -0.09
CHCHD4-202ENST00000396914 H1FX-AS1Q4G0G2 97 aa14.44□□□□□ -0.1
CHCHD4-202ENST00000396914 H0Y9P7 68 aa14.43□□□□□ -0.1
CHCHD4-202ENST00000396914 LOC101927531A0A1B0GV80 90 aa14.4□□□□□ -0.1
CHCHD4-202ENST00000396914 CYP4F30PQ9H0H9 118 aa14.39□□□□□ -0.11
CHCHD4-202ENST00000396914 ATOX1O00244 68 aa14.38□□□□□ -0.11
CHCHD4-202ENST00000396914 SCGB1A1P11684 91 aa14.38□□□□□ -0.11
CHCHD4-202ENST00000396914 MT-ATP8P03928 68 aa14.36□□□□□ -0.11
CHCHD4-202ENST00000396914 KRTAP9-2Q9BYQ4 174 aa14.36□□□□□ -0.11
CHCHD4-202ENST00000396914 OCR1Q9BZK8 76 aa14.32□□□□□ -0.12
CHCHD4-202ENST00000396914 IMUPQ9GZP8 106 aa14.32□□□□□ -0.12
CHCHD4-202ENST00000396914 C1orf64Q8NEQ6 169 aa14.31□□□□□ -0.12
CHCHD4-202ENST00000396914 MP68P56378 58 aa14.27□□□□□ -0.12
CHCHD4-202ENST00000396914 LINC00208Q96KT6 92 aa14.25□□□□□ -0.13
CHCHD4-202ENST00000396914 KRTAP9-8Q9BYQ0 159 aa14.23□□□□□ -0.13
CHCHD4-202ENST00000396914 LCE2DQ5TA82 110 aaPredicted RBP14.22□□□□□ -0.13
CHCHD4-202ENST00000396914 C5orf47Q569G3 176 aa14.2□□□□□ -0.14
CHCHD4-202ENST00000396914 KRTAP3-1Q9BYR8 98 aa14.2□□□□□ -0.14
CHCHD4-202ENST00000396914 FAM236AA0A1B0GUQ0 79 aa14.14□□□□□ -0.15
CHCHD4-202ENST00000396914 FAM236BA0A1B0GV22 79 aa14.14□□□□□ -0.15
CHCHD4-202ENST00000396914 MT2AP02795 61 aa14.11□□□□□ -0.15
CHCHD4-202ENST00000396914 S4R3F8 94 aa14.11□□□□□ -0.15
CHCHD4-202ENST00000396914 H3BPC8 53 aa14.06□□□□□ -0.16
CHCHD4-202ENST00000396914 KLKP1Q107X0 134 aa14.06□□□□□ -0.16
CHCHD4-202ENST00000396914 KRTAP10-10P60014 251 aa14.04□□□□□ -0.16
CHCHD4-202ENST00000396914 SMIM20Q8N5G0 67 aa14.02□□□□□ -0.16
CHCHD4-202ENST00000396914 MT1FP04733 61 aa14□□□□□ -0.17
CHCHD4-202ENST00000396914 LCA10Q71F78 164 aa13.98□□□□□ -0.17
CHCHD4-202ENST00000396914 TRAV7A0A075B6U4 112 aa13.98□□□□□ -0.17
CHCHD4-202ENST00000396914 CSAG1Q6PB30 78 aa13.91□□□□□ -0.18
CHCHD4-202ENST00000396914 A8MUN3 132 aa13.86□□□□□ -0.19
CHCHD4-202ENST00000396914 KRTAP3-3Q9BYR6 98 aa13.76□□□□□ -0.21
CHCHD4-202ENST00000396914 KRTAP9-3Q9BYQ3 159 aa13.75□□□□□ -0.21
CHCHD4-202ENST00000396914 NDUFC1O43677 76 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms