RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MUC2Q02817 5179 aa10.15□□□□□ -0.79
TNFSF13-205ENST00000396545 CD164Q04900 197 aa10.14□□□□□ -0.79
TNFSF13-205ENST00000396545 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
TNFSF13-205ENST00000396545 J3KT08 172 aa10.11□□□□□ -0.79
TNFSF13-205ENST00000396545 A0A087X002 238 aa10.1□□□□□ -0.79
TNFSF13-205ENST00000396545 Q96NJ1 140 aa10.1□□□□□ -0.79
TNFSF13-205ENST00000396545 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
TNFSF13-205ENST00000396545 OCR1Q9BZK8 76 aa10.09□□□□□ -0.79
TNFSF13-205ENST00000396545 A8MWP4 228 aa10.09□□□□□ -0.79
TNFSF13-205ENST00000396545 PRR4Q16378 134 aa10.09□□□□□ -0.79
TNFSF13-205ENST00000396545 HCG22E2RYF7 251 aa10.08□□□□□ -0.8
TNFSF13-205ENST00000396545 KRTAP13-2Q52LG2 175 aa10.08□□□□□ -0.8
TNFSF13-205ENST00000396545 HRCT1Q6UXD1 115 aa10.08□□□□□ -0.8
TNFSF13-205ENST00000396545 PRR15Q8IV56 129 aa10.07□□□□□ -0.8
TNFSF13-205ENST00000396545 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
TNFSF13-205ENST00000396545 CYSTM1Q9H1C7 97 aa10.05□□□□□ -0.8
TNFSF13-205ENST00000396545 C20orf197Q8N268 126 aa10.02□□□□□ -0.81
TNFSF13-205ENST00000396545 KLKP1Q107X0 134 aa10.01□□□□□ -0.81
TNFSF13-205ENST00000396545 C4orf48Q5BLP8 95 aa10□□□□□ -0.81
TNFSF13-205ENST00000396545 Q5XG85 94 aa10□□□□□ -0.81
TNFSF13-205ENST00000396545 SPAG11AQ6PDA7 123 aa10□□□□□ -0.81
TNFSF13-205ENST00000396545 NDUFB1O75438 58 aa9.98□□□□□ -0.81
TNFSF13-205ENST00000396545 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
TNFSF13-205ENST00000396545 SPINK1P00995 79 aa9.97□□□□□ -0.81
TNFSF13-205ENST00000396545 WFDC13Q8IUB5 93 aa9.97□□□□□ -0.81
TNFSF13-205ENST00000396545 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
TNFSF13-205ENST00000396545 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.82
TNFSF13-205ENST00000396545 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.82
TNFSF13-205ENST00000396545 CASC2Q6XLA1 102 aa9.96□□□□□ -0.82
TNFSF13-205ENST00000396545 TMEM254Q8TBM7 123 aa9.94□□□□□ -0.82
TNFSF13-205ENST00000396545 TMEM258P61165 79 aa9.93□□□□□ -0.82
TNFSF13-205ENST00000396545 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
TNFSF13-205ENST00000396545 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
TNFSF13-205ENST00000396545 A0A1B0GVX0 72 aa9.92□□□□□ -0.82
TNFSF13-205ENST00000396545 SNURFQ9Y675 71 aa9.91□□□□□ -0.82
TNFSF13-205ENST00000396545 H7BZZ5 65 aa9.9□□□□□ -0.82
TNFSF13-205ENST00000396545 C8orf17Q9NRJ1 99 aa9.9□□□□□ -0.82
TNFSF13-205ENST00000396545 hDV103S1A0JD37 113 aa9.88□□□□□ -0.83
TNFSF13-205ENST00000396545 NDUFC1O43677 76 aa9.88□□□□□ -0.83
TNFSF13-205ENST00000396545 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
TNFSF13-205ENST00000396545 FAT4Q6V0I7 4981 aa9.85□□□□□ -0.83
TNFSF13-205ENST00000396545 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
TNFSF13-205ENST00000396545 IGHV6-1A0A0B4J1U7 121 aa9.84□□□□□ -0.83
TNFSF13-205ENST00000396545 ZCCHC13Q8WW36 166 aaKnown RBP9.84□□□□□ -0.83
TNFSF13-205ENST00000396545 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
TNFSF13-205ENST00000396545 C1orf195Q5TG92 126 aa9.81□□□□□ -0.84
TNFSF13-205ENST00000396545 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
TNFSF13-205ENST00000396545 KRTAP9-2Q9BYQ4 174 aa9.8□□□□□ -0.84
TNFSF13-205ENST00000396545 NOTCH2NLQ7Z3S9 236 aa9.8□□□□□ -0.84
TNFSF13-205ENST00000396545 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
TNFSF13-205ENST00000396545 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
TNFSF13-205ENST00000396545 FAM236DA0A1B0GTK5 79 aa9.77□□□□□ -0.85
TNFSF13-205ENST00000396545 FAM236CP0DP71 79 aa9.77□□□□□ -0.85
TNFSF13-205ENST00000396545 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
TNFSF13-205ENST00000396545 MUC17Q685J3 4493 aa9.77□□□□□ -0.85
TNFSF13-205ENST00000396545 IGLV7-46A0A075B6I9 117 aa9.76□□□□□ -0.85
TNFSF13-205ENST00000396545 H3BPC8 53 aa9.76□□□□□ -0.85
TNFSF13-205ENST00000396545 MP68P56378 58 aa9.75□□□□□ -0.85
TNFSF13-205ENST00000396545 H0Y9P7 68 aa9.74□□□□□ -0.85
TNFSF13-205ENST00000396545 RPS28P62857 69 aaKnown RBP9.73□□□□□ -0.85
TNFSF13-205ENST00000396545 TRAV22A0A0B4J277 110 aa9.72□□□□□ -0.85
TNFSF13-205ENST00000396545 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
TNFSF13-205ENST00000396545 LINC00208Q96KT6 92 aa9.69□□□□□ -0.86
TNFSF13-205ENST00000396545 LINC00313P59037 77 aa9.67□□□□□ -0.86
TNFSF13-205ENST00000396545 NDUFS5O43920 106 aa9.66□□□□□ -0.86
TNFSF13-205ENST00000396545 FP248Q71RG6 208 aaPredicted RBP9.65□□□□□ -0.86
TNFSF13-205ENST00000396545 C1orf64Q8NEQ6 169 aa9.64□□□□□ -0.87
TNFSF13-205ENST00000396545 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
TNFSF13-205ENST00000396545 Q8N9P0 234 aaPredicted RBP9.63□□□□□ -0.87
TNFSF13-205ENST00000396545 SERP1Q9Y6X1 66 aa9.63□□□□□ -0.87
TNFSF13-205ENST00000396545 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
TNFSF13-205ENST00000396545 Q5W150 140 aa9.55□□□□□ -0.88
TNFSF13-205ENST00000396545 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
TNFSF13-205ENST00000396545 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
TNFSF13-205ENST00000396545 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
TNFSF13-205ENST00000396545 LOC101927531A0A1B0GV80 90 aa9.5□□□□□ -0.89
TNFSF13-205ENST00000396545 KRTAP4-1Q9BYQ7 146 aa9.5□□□□□ -0.89
TNFSF13-205ENST00000396545 SEC61BP60468 96 aaKnown RBP9.47□□□□□ -0.89
TNFSF13-205ENST00000396545 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
TNFSF13-205ENST00000396545 XP32Q5T750 250 aa9.41□□□□□ -0.9
TNFSF13-205ENST00000396545 SMIM26A0A096LP01 95 aa9.4□□□□□ -0.9
TNFSF13-205ENST00000396545 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
TNFSF13-205ENST00000396545 C9orf92A6NGG3 77 aa9.39□□□□□ -0.91
TNFSF13-205ENST00000396545 C20orf166-AS1Q96NR2 134 aa9.39□□□□□ -0.91
TNFSF13-205ENST00000396545 A8MUU9 505 aa9.37□□□□□ -0.91
TNFSF13-205ENST00000396545 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
TNFSF13-205ENST00000396545 Q75L30 129 aa9.33□□□□□ -0.92
TNFSF13-205ENST00000396545 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
TNFSF13-205ENST00000396545 FSIP2Q5CZC0 6907 aa9.29□□□□□ -0.92
TNFSF13-205ENST00000396545 HRES1P13985 223 aa9.28□□□□□ -0.92
TNFSF13-205ENST00000396545 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
TNFSF13-205ENST00000396545 COA5Q86WW8 74 aa9.24□□□□□ -0.93
TNFSF13-205ENST00000396545 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
TNFSF13-205ENST00000396545 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
TNFSF13-205ENST00000396545 C7orf65Q6ZTY9 151 aa9.21□□□□□ -0.93
TNFSF13-205ENST00000396545 DMAC1Q96GE9 116 aa9.21□□□□□ -0.93
TNFSF13-205ENST00000396545 CRCT1Q9UGL9 99 aa9.21□□□□□ -0.93
TNFSF13-205ENST00000396545 MT1HP80294 61 aa9.2□□□□□ -0.94
TNFSF13-205ENST00000396545 C4orf26Q17RF5 130 aa9.2□□□□□ -0.94
TNFSF13-205ENST00000396545 ATP11AUNQ6ZP68 121 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms