RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 K7ERJ3 54 aa8.22□□□□□ -1.09
DDR1-229ENST00000396342 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
DDR1-229ENST00000396342 C9JAW5 83 aa8.19□□□□□ -1.1
DDR1-229ENST00000396342 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
DDR1-229ENST00000396342 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
DDR1-229ENST00000396342 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
DDR1-229ENST00000396342 HRES1P13985 223 aa8.17□□□□□ -1.1
DDR1-229ENST00000396342 ZCCHC13Q8WW36 166 aaKnown RBP8.16□□□□□ -1.1
DDR1-229ENST00000396342 LINC00846Q9NV44 126 aa8.16□□□□□ -1.1
DDR1-229ENST00000396342 BAALC-AS2P0C853 105 aa8.14□□□□□ -1.11
DDR1-229ENST00000396342 MT2AP02795 61 aa8.13□□□□□ -1.11
DDR1-229ENST00000396342 MPLKIPQ8TAP9 179 aa8.13□□□□□ -1.11
DDR1-229ENST00000396342 SPINK7P58062 85 aa8.12□□□□□ -1.11
DDR1-229ENST00000396342 KRTAP9-7A8MTY7 169 aa8.11□□□□□ -1.11
DDR1-229ENST00000396342 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.11□□□□□ -1.11
DDR1-229ENST00000396342 JMJD7-PLA2G4BH0Y9G9 81 aa8.1□□□□□ -1.11
DDR1-229ENST00000396342 A0A1B0GW54 56 aa8.09□□□□□ -1.11
DDR1-229ENST00000396342 Q6ZQT0 140 aa8.09□□□□□ -1.11
DDR1-229ENST00000396342 PDE6GP18545 87 aa8.08□□□□□ -1.12
DDR1-229ENST00000396342 ATXN8Q156A1 80 aa8.08□□□□□ -1.12
DDR1-229ENST00000396342 A8MWP4 228 aa8.04□□□□□ -1.12
DDR1-229ENST00000396342 MT1FP04733 61 aa8.04□□□□□ -1.12
DDR1-229ENST00000396342 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
DDR1-229ENST00000396342 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
DDR1-229ENST00000396342 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
DDR1-229ENST00000396342 M0R143 59 aa8.02□□□□□ -1.13
DDR1-229ENST00000396342 USH2AO75445 5202 aa8.01□□□□□ -1.13
DDR1-229ENST00000396342 NREPQ16612 68 aa8□□□□□ -1.13
DDR1-229ENST00000396342 Q6ZVQ6 151 aa8□□□□□ -1.13
DDR1-229ENST00000396342 LOC110117498A0A087WWA1 95 aa7.99□□□□□ -1.13
DDR1-229ENST00000396342 KRTAP19-1Q8IUB9 90 aa7.98□□□□□ -1.13
DDR1-229ENST00000396342 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
DDR1-229ENST00000396342 IGKV3D-7A0A0C4DH55 119 aa7.97□□□□□ -1.13
DDR1-229ENST00000396342 SMIM6P0DI80 62 aa7.97□□□□□ -1.13
DDR1-229ENST00000396342 LCE2BO14633 110 aa7.96□□□□□ -1.14
DDR1-229ENST00000396342 NDUFS5O43920 106 aa7.96□□□□□ -1.14
DDR1-229ENST00000396342 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
DDR1-229ENST00000396342 LOC105371267A0A1B0GV96 52 aa7.94□□□□□ -1.14
DDR1-229ENST00000396342 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
DDR1-229ENST00000396342 C14orf132Q9NPU4 83 aa7.94□□□□□ -1.14
DDR1-229ENST00000396342 TMEM254Q8TBM7 123 aa7.91□□□□□ -1.14
DDR1-229ENST00000396342 MRPL34Q9BQ48 92 aaKnown RBP7.91□□□□□ -1.14
DDR1-229ENST00000396342 NAA38Q9BRA0 125 aaKnown RBP7.89□□□□□ -1.15
DDR1-229ENST00000396342 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
DDR1-229ENST00000396342 TSTD3H0UI37 97 aa7.88□□□□□ -1.15
DDR1-229ENST00000396342 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
DDR1-229ENST00000396342 FCGBPQ9Y6R7 5405 aaPredicted RBP7.88□□□□□ -1.15
DDR1-229ENST00000396342 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
DDR1-229ENST00000396342 IGKV2-30P06310 120 aa7.83□□□□□ -1.16
DDR1-229ENST00000396342 MMP24-AS1A0A0U1RRL7 71 aa7.82□□□□□ -1.16
DDR1-229ENST00000396342 BPY2O14599 106 aa7.82□□□□□ -1.16
DDR1-229ENST00000396342 BATFQ16520 125 aa7.82□□□□□ -1.16
DDR1-229ENST00000396342 C7orf65Q6ZTY9 151 aa7.81□□□□□ -1.16
DDR1-229ENST00000396342 K7EQZ3 153 aa7.79□□□□□ -1.16
DDR1-229ENST00000396342 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
DDR1-229ENST00000396342 H3BT86 120 aa7.77□□□□□ -1.17
DDR1-229ENST00000396342 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
DDR1-229ENST00000396342 MACF1Q9UPN3 7388 aaKnown RBP7.74□□□□□ -1.17
DDR1-229ENST00000396342 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
DDR1-229ENST00000396342 CXCL6P80162 114 aa7.7□□□□□ -1.18
DDR1-229ENST00000396342 FAM236AA0A1B0GUQ0 79 aa7.69□□□□□ -1.18
DDR1-229ENST00000396342 FAM236BA0A1B0GV22 79 aa7.69□□□□□ -1.18
DDR1-229ENST00000396342 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
DDR1-229ENST00000396342 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
DDR1-229ENST00000396342 A0A1W2PPM0 123 aa7.65□□□□□ -1.18
DDR1-229ENST00000396342 TAX1BP3O14907 124 aa7.65□□□□□ -1.18
DDR1-229ENST00000396342 C4orf26Q17RF5 130 aa7.65□□□□□ -1.18
DDR1-229ENST00000396342 Q5W150 140 aa7.64□□□□□ -1.19
DDR1-229ENST00000396342 UBL5Q9BZL1 73 aa7.64□□□□□ -1.19
DDR1-229ENST00000396342 Q8N9L7 120 aa7.63□□□□□ -1.19
DDR1-229ENST00000396342 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
DDR1-229ENST00000396342 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
DDR1-229ENST00000396342 PCP4L1A6NKN8 68 aa7.57□□□□□ -1.2
DDR1-229ENST00000396342 KRTAP6-3Q3LI67 103 aa7.57□□□□□ -1.2
DDR1-229ENST00000396342 SPCS1Q9Y6A9 102 aa7.57□□□□□ -1.2
DDR1-229ENST00000396342 S4R3F8 94 aa7.57□□□□□ -1.2
DDR1-229ENST00000396342 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
DDR1-229ENST00000396342 C1orf64Q8NEQ6 169 aa7.53□□□□□ -1.2
DDR1-229ENST00000396342 TP53AIP1Q9HCN2 124 aa7.53□□□□□ -1.2
DDR1-229ENST00000396342 A6NN06 94 aa7.51□□□□□ -1.21
DDR1-229ENST00000396342 Q5VV11 94 aa7.51□□□□□ -1.21
DDR1-229ENST00000396342 K7EP34 96 aa7.43□□□□□ -1.22
DDR1-229ENST00000396342 LCA10Q71F78 164 aa7.42□□□□□ -1.22
DDR1-229ENST00000396342 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
DDR1-229ENST00000396342 IMUPQ9GZP8 106 aa7.39□□□□□ -1.23
DDR1-229ENST00000396342 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
DDR1-229ENST00000396342 GTF2H5Q6ZYL4 71 aa7.38□□□□□ -1.23
DDR1-229ENST00000396342 KRTAP3-1Q9BYR8 98 aa7.37□□□□□ -1.23
DDR1-229ENST00000396342 PRO0461Q9UI25 63 aa7.37□□□□□ -1.23
DDR1-229ENST00000396342 SPRR2GQ9BYE4 73 aa7.36□□□□□ -1.23
DDR1-229ENST00000396342 CRIPTQ9P021 101 aa7.35□□□□□ -1.23
DDR1-229ENST00000396342 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
DDR1-229ENST00000396342 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
DDR1-229ENST00000396342 F8W1H4 67 aa7.3□□□□□ -1.24
DDR1-229ENST00000396342 MT1BP07438 61 aa7.3□□□□□ -1.24
DDR1-229ENST00000396342 CYP4F30PQ9H0H9 118 aa7.3□□□□□ -1.24
DDR1-229ENST00000396342 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
DDR1-229ENST00000396342 NDUFC1O43677 76 aa7.26□□□□□ -1.25
DDR1-229ENST00000396342 KRTAP10-5P60370 271 aa7.26□□□□□ -1.25
DDR1-229ENST00000396342 ETDBQ3ZM63 59 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms