RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 A8MWP4 228 aa13.72□□□□□ -0.21
HOMER3-202ENST00000392351 NDUFB1O75438 58 aa13.72□□□□□ -0.21
HOMER3-202ENST00000392351 RNF213Q63HN8 5207 aa13.72□□□□□ -0.21
HOMER3-202ENST00000392351 UBL5Q9BZL1 73 aa13.71□□□□□ -0.21
HOMER3-202ENST00000392351 SEC61BP60468 96 aaKnown RBP13.71□□□□□ -0.22
HOMER3-202ENST00000392351 NOTCH2NLQ7Z3S9 236 aa13.71□□□□□ -0.22
HOMER3-202ENST00000392351 BPY2O14599 106 aa13.69□□□□□ -0.22
HOMER3-202ENST00000392351 MUC17Q685J3 4493 aa13.68□□□□□ -0.22
HOMER3-202ENST00000392351 IGKV3D-7A0A0C4DH55 119 aa13.67□□□□□ -0.22
HOMER3-202ENST00000392351 RPL37P61927 97 aaKnown RBP13.67□□□□□ -0.22
HOMER3-202ENST00000392351 C8orf87E5RJ46 101 aa13.66□□□□□ -0.22
HOMER3-202ENST00000392351 Q75L30 129 aa13.62□□□□□ -0.23
HOMER3-202ENST00000392351 PRR15Q8IV56 129 aa13.62□□□□□ -0.23
HOMER3-202ENST00000392351 KRTAP16-1A8MUX0 517 aa13.62□□□□□ -0.23
HOMER3-202ENST00000392351 K7EQZ3 153 aa13.61□□□□□ -0.23
HOMER3-202ENST00000392351 PCOTHQ58A44 107 aa13.61□□□□□ -0.23
HOMER3-202ENST00000392351 C20orf166-AS1Q96NR2 134 aa13.6□□□□□ -0.23
HOMER3-202ENST00000392351 ACYP1P07311 99 aa13.59□□□□□ -0.23
HOMER3-202ENST00000392351 MUC2Q02817 5179 aa13.58□□□□□ -0.23
HOMER3-202ENST00000392351 FAM240AA0A1B0GVK7 77 aa13.58□□□□□ -0.23
HOMER3-202ENST00000392351 C8orf17Q9NRJ1 99 aa13.58□□□□□ -0.23
HOMER3-202ENST00000392351 A8MUU9 505 aa13.58□□□□□ -0.24
HOMER3-202ENST00000392351 Q8N9L7 120 aa13.54□□□□□ -0.24
HOMER3-202ENST00000392351 ATP11AUNQ6ZP68 121 aa13.51□□□□□ -0.25
HOMER3-202ENST00000392351 MMP24-AS1A0A0U1RRL7 71 aa13.49□□□□□ -0.25
HOMER3-202ENST00000392351 KRTAP4-1Q9BYQ7 146 aa13.48□□□□□ -0.25
HOMER3-202ENST00000392351 CXCL6P80162 114 aa13.45□□□□□ -0.26
HOMER3-202ENST00000392351 J3QR89 54 aa13.43□□□□□ -0.26
HOMER3-202ENST00000392351 hDV103S1A0JD37 113 aa13.42□□□□□ -0.26
HOMER3-202ENST00000392351 Q8N9P0 234 aaPredicted RBP13.41□□□□□ -0.26
HOMER3-202ENST00000392351 TMEM254Q8TBM7 123 aa13.41□□□□□ -0.26
HOMER3-202ENST00000392351 MRPL34Q9BQ48 92 aaKnown RBP13.39□□□□□ -0.27
HOMER3-202ENST00000392351 WFDC13Q8IUB5 93 aa13.37□□□□□ -0.27
HOMER3-202ENST00000392351 ATP5EP2Q5VTU8 51 aa13.35□□□□□ -0.27
HOMER3-202ENST00000392351 CASC2Q6XLA1 102 aa13.35□□□□□ -0.27
HOMER3-202ENST00000392351 HCG22E2RYF7 251 aa13.32□□□□□ -0.28
HOMER3-202ENST00000392351 LINC00643Q86TS7 51 aa13.31□□□□□ -0.28
HOMER3-202ENST00000392351 NDUFS5O43920 106 aa13.29□□□□□ -0.28
HOMER3-202ENST00000392351 ZCCHC13Q8WW36 166 aaKnown RBP13.28□□□□□ -0.28
HOMER3-202ENST00000392351 A0A0U1RQV1 116 aa13.24□□□□□ -0.29
HOMER3-202ENST00000392351 K7ERU9 68 aa13.22□□□□□ -0.29
HOMER3-202ENST00000392351 HIST1H4AP62805 103 aaKnown RBP13.21□□□□□ -0.29
HOMER3-202ENST00000392351 FAT4Q6V0I7 4981 aa13.12□□□□□ -0.31
HOMER3-202ENST00000392351 A0A087WVE0 104 aa13.1□□□□□ -0.31
HOMER3-202ENST00000392351 Q5W150 140 aa13.07□□□□□ -0.32
HOMER3-202ENST00000392351 KRTAP19-2Q3LHN2 52 aa13.05□□□□□ -0.32
HOMER3-202ENST00000392351 SPINK7P58062 85 aa13.04□□□□□ -0.32
HOMER3-202ENST00000392351 TP53AIP1Q9HCN2 124 aa13.02□□□□□ -0.33
HOMER3-202ENST00000392351 LCE2CQ5TA81 110 aa12.98□□□□□ -0.33
HOMER3-202ENST00000392351 COX6B2Q6YFQ2 88 aa12.98□□□□□ -0.33
HOMER3-202ENST00000392351 HRES1P13985 223 aa12.97□□□□□ -0.33
HOMER3-202ENST00000392351 MT-ATP8P03928 68 aa12.94□□□□□ -0.34
HOMER3-202ENST00000392351 IGKV2D-30A0A075B6S6 120 aa12.93□□□□□ -0.34
HOMER3-202ENST00000392351 IGKV2-30P06310 120 aa12.93□□□□□ -0.34
HOMER3-202ENST00000392351 C7orf65Q6ZTY9 151 aa12.9□□□□□ -0.35
HOMER3-202ENST00000392351 MPLKIPQ8TAP9 179 aa12.9□□□□□ -0.35
HOMER3-202ENST00000392351 RBM12B-AS1Q9P1G2 102 aa12.89□□□□□ -0.35
HOMER3-202ENST00000392351 LCE2AQ5TA79 106 aaPredicted RBP12.88□□□□□ -0.35
HOMER3-202ENST00000392351 IMUPQ9GZP8 106 aa12.87□□□□□ -0.35
HOMER3-202ENST00000392351 TRAV22A0A0B4J277 110 aa12.83□□□□□ -0.36
HOMER3-202ENST00000392351 FAM236DA0A1B0GTK5 79 aa12.83□□□□□ -0.36
HOMER3-202ENST00000392351 FAM236CP0DP71 79 aa12.83□□□□□ -0.36
HOMER3-202ENST00000392351 UQCRQO14949 82 aa12.81□□□□□ -0.36
HOMER3-202ENST00000392351 MT1HP80294 61 aa12.79□□□□□ -0.36
HOMER3-202ENST00000392351 SCGB1A1P11684 91 aa12.76□□□□□ -0.37
HOMER3-202ENST00000392351 OCR1Q9BZK8 76 aa12.76□□□□□ -0.37
HOMER3-202ENST00000392351 FLGP20930 4061 aaPredicted RBP12.74□□□□□ -0.37
HOMER3-202ENST00000392351 H0Y9P7 68 aa12.72□□□□□ -0.37
HOMER3-202ENST00000392351 ATOX1O00244 68 aa12.69□□□□□ -0.38
HOMER3-202ENST00000392351 FAM236AA0A1B0GUQ0 79 aa12.68□□□□□ -0.38
HOMER3-202ENST00000392351 FAM236BA0A1B0GV22 79 aa12.68□□□□□ -0.38
HOMER3-202ENST00000392351 LOC101927531A0A1B0GV80 90 aa12.67□□□□□ -0.38
HOMER3-202ENST00000392351 CYP4F30PQ9H0H9 118 aa12.64□□□□□ -0.39
HOMER3-202ENST00000392351 M0R2T5 61 aa12.64□□□□□ -0.39
HOMER3-202ENST00000392351 C4orf26Q17RF5 130 aa12.64□□□□□ -0.39
HOMER3-202ENST00000392351 MP68P56378 58 aa12.6□□□□□ -0.39
HOMER3-202ENST00000392351 C5orf47Q569G3 176 aa12.59□□□□□ -0.39
HOMER3-202ENST00000392351 C1orf64Q8NEQ6 169 aa12.59□□□□□ -0.39
HOMER3-202ENST00000392351 LINC00208Q96KT6 92 aa12.58□□□□□ -0.4
HOMER3-202ENST00000392351 SMIM20Q8N5G0 67 aa12.52□□□□□ -0.4
HOMER3-202ENST00000392351 H1FX-AS1Q4G0G2 97 aa12.51□□□□□ -0.41
HOMER3-202ENST00000392351 KRTAP9-2Q9BYQ4 174 aa12.5□□□□□ -0.41
HOMER3-202ENST00000392351 TRAV7A0A075B6U4 112 aa12.48□□□□□ -0.41
HOMER3-202ENST00000392351 H3BPC8 53 aa12.47□□□□□ -0.41
HOMER3-202ENST00000392351 KRTAP10-6P60371 365 aaPredicted RBP12.45□□□□□ -0.42
HOMER3-202ENST00000392351 KRTAP3-1Q9BYR8 98 aa12.43□□□□□ -0.42
HOMER3-202ENST00000392351 KLKP1Q107X0 134 aa12.41□□□□□ -0.42
HOMER3-202ENST00000392351 LORP23490 312 aaPredicted RBP12.4□□□□□ -0.42
HOMER3-202ENST00000392351 SERP2Q8N6R1 65 aa12.3□□□□□ -0.44
HOMER3-202ENST00000392351 S4R3F8 94 aa12.25□□□□□ -0.45
HOMER3-202ENST00000392351 SNURFQ9Y675 71 aa12.2□□□□□ -0.46
HOMER3-202ENST00000392351 KRTAP9-8Q9BYQ0 159 aa12.19□□□□□ -0.46
HOMER3-202ENST00000392351 A8MUN3 132 aa12.18□□□□□ -0.46
HOMER3-202ENST00000392351 LCA10Q71F78 164 aa12.18□□□□□ -0.46
HOMER3-202ENST00000392351 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
HOMER3-202ENST00000392351 LCE2DQ5TA82 110 aaPredicted RBP12.14□□□□□ -0.47
HOMER3-202ENST00000392351 COX7CP15954 63 aa12.1□□□□□ -0.47
HOMER3-202ENST00000392351 MT2AP02795 61 aa12.09□□□□□ -0.47
HOMER3-202ENST00000392351 DMAC1Q96GE9 116 aa12.07□□□□□ -0.48
HOMER3-202ENST00000392351 CSAG1Q6PB30 78 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms